Conserved Protein Domain Family
7tmA_OR56-like

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cd15223: 7tmA_OR56-like 
olfactory receptor family 56 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors
This group includes human olfactory receptor family 56 and related proteins in other mammals, sauropsids, and fishes. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.
Statistics
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PSSM-Id: 320351
Aligned: 14 rows
Threshold Bit Score: 368.158
Created: 4-Dec-2013
Updated: 17-Oct-2022
Structure
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Aligned Rows:
  next features
Feature 1:putative ligand binding pocket [chemical binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                #  ##           ###### #
Q8NGI1        34 HWLSLPLALLYLLALSANILILIIINKEAALHqPMYYFLGILAMADIGLATTIMPKILAILWFNaKTISLleCFAQMYAI 113 human
Q8NH54        29 HWLSLPLSLLFLLAVGANTTLLMTIWLEASLHqPLYYLLSLLSLLDIVLCLTVIPKVLTIFWFDlRPISFpaCFLQMYIM 108 human
NP_001000127  29 ALLMLPFLSLYLVILFTNALVIHTVASQRSLHqPMYLLIALLLAINICAATTVLPAMLFSFSTSfNRISLprCLGQMFCI 108 Norway rat
XP_006013945  27 LHFSILFCVLYLLAVTCNLALLCIIKADHNLHePMYIFLSILATVDLVLSSTTFPKLLAILWFGdSTITFegCFVQMSFA 106 coelacanth
XP_006013949  27 PWLSIPFCTLYVLALVCNSSLLLIITVEHGLHePMYFCLCVLASADLVLCTSILPKLLAIFWFDaKAITFggCFTQMAVV 106 coelacanth
XP_006628027  27 RFLSIPFIIMLIVAVIGNSTIIFIIKTGSGLHsPMYVLIGAIAIVDLSLPMLFIPKMLLNFLFDlNEISLlgCLVQMFFI 106 spotted gar
CDQ98717      28 RLLSLPFLTTYILVLVGNSLLIYVIRIMESLHsPMYILICGLAAVDIVVATVIIPNMLLSFLFDwNDISLasCLTQMFFT 107 rainbow trout
XP_007236854  28 RLLFLPFFLSYLVILIGNSLILFVIKNTKSLHnPMYILVSALALVDIAVPTAIIPAMLPSFLFDlNEITLvgCLMQMFFI 107 Mexican tetra
XP_006628029  27 RFLSIPFLIMFVVATVGNSVLISVLKRGSGLQsPMYILIGALAVVDLTLPVLFVPKMLLNFLFDwNSISLpgCLVQMFFI 106 spotted gar
XP_006121714  30 ALLFIPFFCLYLVNVGANCTVIYTIWVERSLHsPMYLLISLLSAMGLCSTSAILPQMLLGFLAHsSRLSLpgCLAQMFFI 109 Chinese soft-sh...
Feature 1        #  #                                            # #####                         
Q8NGI1       114 HCFVAMESSTFVCMAIDRYVAICRPLrYPSIITESFVFKANGFMALRNSLCLISVPLlaAQRHYCSQNQIEHCLCSNLGV 193 human
Q8NH54       109 NCFLAMESCTFMVMAYDRYVAICHPLrYPSIITDHFVVKAAMFILTRNVLMTLPIPIlsAQLRYCGRNVIENCICANMSV 188 human
NP_001000127 109 YFLVSMDCNILLVMALDRYVAICYPLrYPEIVTGQLLAGLVVVAVTRSTCIVAPVVVlaSRVRFCRSDVIHHFACEHMAL 188 Norway rat
XP_006013945 107 HFFTAMESTILVVMAFDRYVAICKPLhYTAIFTNSFIVKLGTVSVLRSAVLSLPQYMysSQLSFCSSNVIPHYYCDHTTT 186 coelacanth
XP_006013949 107 HFFTATESAILVVMAYDRYVAICKPLlYSTIITNGFIMKLCAVGLVRSAVLLLPQYMfsSQLSYCASNEISHCFCDHSSI 186 coelacanth
XP_006628027 107 HFVSSFESTILLVMALDRYVAICNPLrYNDYINKSTFLKLSVAALIRSGILISLIVIlaGSLSYCLSNVIEHCYCEHMAL 186 spotted gar
CDQ98717     108 HFLSSVESTILLAMALDRYVAICYPLhYARILNPATFLRLLLFTVIRSGSIMFVLVAlaGSLSFCGSNVINHCYCDHMAL 187 rainbow trout
XP_007236854 108 HFLSSVESTILLAMALDRLVAICNPLrYTAIMNTSTFLKLLLFTLIRSGIIMSTLVGlaSPLSFCGSNIIHHCYCDHMAL 187 Mexican tetra
XP_006628029 107 HMLASLESAILLVMAIDRYVAICNPLrYNDYINMSTFLKVSIAVVIRNGLFISLIVIqaGSLSFCLSNVIEHCYCEHMVL 186 spotted gar
XP_006121714 110 YLLIIMDSSVLLLMALDRYVAICKPLrYVDIMSKRLLAGMVLAALIRGISVACLMVVlaSRLPFCQSNVIQHFACEHMAL 189 Chinese soft-sh...
Feature 1                  #  ### ### ##                                            #  ## ##  #  
Q8NGI1       194 TSLSCDDrriNSINQVLLAWTLMGSDLGLIILSYALILYSVLKLnspEAASKALSTCTSHLILILFFYTVIIVISITRST 273 human
Q8NH54       189 SRLSCDDvtiNHLYQFAGGWTLLGSDLILIFLSYTFILRAVLRLkaeGAVAKALSTCGSHFMLILFFSTILLVFVLTHVA 268 human
NP_001000127 189 MKLSCGDtslNKTVGLIIRTFNRVLDMLLLGASYSRIIHAAFRIssgGARSKALNTCGSHLLVIFTVYSSTMSSSIVYRV 268 Norway rat
XP_006013945 187 LSIACADitiNKIFSILLTMLISGTDITLIFFSYLLILRAVFKLgsaRARWKTFSTCVSHFCVILYFYTAVLFSIFTKRF 266 coelacanth
XP_006013949 187 LRLACTDtatNSFVGLIVSLFMVVTDIIFIMISYFLILRAVIKLastKARQKAFNTCASHFYVILYFYTALVFSILTKRF 266 coelacanth
XP_006628027 187 VGLACESttkNSIMGLLVVFCIPGLDLLFIFFSYLKIFSVVFKAasgKSCHKAMHTCGTHLIVILVSYTLAMCSFIAYRF 266 spotted gar
CDQ98717     188 VSLACGNtdkNNAIGLAVIICFVGIDICVIVFSYVKILNVVLRRaagEDRWKAFHTCGTHLIVIMCFYLIGTVTFLSRNL 267 rainbow trout
XP_007236854 188 VSLACNStarNSAMGVAVIVCFVGIDISVIFLSYVKILYVVLRAaagEQRSKALNTCGTHLIVMMCFYFVGSVTFLSRNL 267 Mexican tetra
XP_006628029 187 VNLACGNttqNSIIGLLAIICILGSDLMFICYSYCTIFCTVLKAasgKSRQKAVHTCGTHLIVILLSYSLAIGSFLVYRF 266 spotted gar
XP_006121714 190 VSLACSStshNSILSMVMGSVIIVFDTFCILASYTSIIHTALQIasgSLRRKAFHTCGTQLLVMFFMYSSFLSSSIVYRA 269 Chinese soft-sh...
Feature 1             ## ###  #  ##                     
Q8NGI1       274 Gm-rVPLIPVLLNVLHNVIPPALNPMVYALKNKELRQGL 311 human
Q8NH54       269 KkkvSPDVPVLLNVLHHVIPAALNPIIYGVRTQEIKQGM 307 human
NP_001000127 269 ArtaSQDVHNLLSAFYLLLPCLVNPIIYGARTKEIRQHL 307 Norway rat
XP_006013945 267 Gn-iPSEYNILVASSYVLIPPALNPIIYGIRTKEIRQAF 304 coelacanth
XP_006013949 267 GktiPSFAHILIASSYILVPPALNPLIYGVRTKEIRQGV 305 coelacanth
XP_006628027 267 GksvPPDVHVLISVIYVIFPCCFNPVIYGVRTKEIRDQI 305 spotted gar
CDQ98717     268 NiqiPTDINTFLGVMYIVLPASVNPIIYGVRTKEIRNRI 306 rainbow trout
XP_007236854 268 SipiPVDVNTFLGITYIVFPACINPIIYGVRTKEIRNAL 306 Mexican tetra
XP_006628029 267 RdvvSPDVHNLMSVMYVIFPSCFNPVIYGVRTKEIREEI 305 spotted gar
XP_006121714 270 GqavSQDVHNLLSAIYLLLPSTLNPIIYGVRTKEIKQRV 308 Chinese soft-shelled turtle

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