Conserved Protein Domain Family
7tmA_OR3A-like

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cd15233: 7tmA_OR3A-like 
olfactory receptor subfamily 3A3 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors
This group includes human olfactory receptor subfamily 3A3 and 3A4, and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.
Statistics
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PSSM-Id: 320361
Aligned: 6 rows
Threshold Bit Score: 441.154
Created: 17-Jan-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
  next features
Feature 1:putative ligand binding pocket [chemical binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                #  ##           ###### #
P47888        34 PVVFVLLLFAYLVTTGGNLSILAAVLVEPKLHaPMYFFLGNLSVLDVGCITVTVPAMLGRLLshkSTISYdaCLSQLFFF 113 human
Q60891        28 PILFVVFFFAYIVTVGGNLSILAAIFVEPKLHtPMYYFLGNLSLLDIGCISVTVPPMLVCLLaheCRVPYaaCISQLFFF 107 house mouse
P47883        28 PILFVIFLLAYVTTIGGTLSILAAILMETKLHsPMYFFLGNLSLPDVGCVSVTVPAMLSHFIsndRSIPYkaCLSELFFF 107 human
XP_007657469  29 FVAVPTDPPGHYLGGGGNLSIILAILLEPQLHnPMYFFLGNLSLTDISCITVTVPHRLGNLLsqkKTISLagCLAQLFFF 108 platypus
ELV09627      25 PLLFAVFLLIYIVAIVGNLGIVSLIVLDSRLHtPMYFFLGNLSLLDAAYISNTVPQVLVHLLaavRTMPYhsCLIQIFFL 104 Chinese tree shrew
ELK13739     173 PLLFATFLLVYIVAVVGNLGIFCLIVIDSRLHtPMYFFLANLSLLDTAYISNTVPQVLVHLLapvRTMSYraCLTQIFFL 252 black flying fox
Feature 1        #  #                                            # #####                         
P47888       114 HLLAGMDCFLLTAMAYDRLLAICQPLtYSTRMsQTVQRMLVAASWACAFTNALTHTVAMstLNFCGPNEVNHFYCDLPQL 193 human
Q60891       108 HLLAGVDCHLLTAMAYDRYLAICQPLtYSTRMsREVQGTLVGICCTVSFINALTHTVAVsvLDFCGPNVVNHFYCDLPPL 187 house mouse
P47883       108 HLLAGADCFLLTIMAYDRYLAICQSLtYSSRMsWGIQQALVGMSCVFSFTNALTQTVALspLNFCGPNVINHFYCDLPQP 187 human
XP_007657469 109 HLLTGANCFLLTAMAYDRXLAICHPLdYRARMkWSVQVALVGASWACAXTNALTHTVAMstLYFCGPNVINHFFCDIPPL 188 platypus
ELV09627     105 HFLAPWECFLLTAMAYDRYAAICQPLyYLVLMgRRTRTGLTSISCLLALTNALTHTILAalLKFCGPRLVTHFFCDLPPL 184 Chinese tree shrew
ELK13739     253 HFLAPWECFLLTAMSYDRYAAICQPLhYLVLMgQRTRTGLAVISCLLALANSLTHTILAalLKFCRPRLITHFFCDLPPL 332 black flying fox
Feature 1                  #  ### ### ##                                            #  ## ##  #  
P47888       194 FQLSCSStqlNELLLFVAAAFMAVAPLVFISVSYAHVVAAVLQiRSAEGRKKAFSTCGSHLTVVGIFYGTGVFSYMRLGS 273 human
Q60891       188 FQLSCSSiylNGQLLFVGATFMGVVPMILISVSYAHVAAAVLRiRSTEGRKKAFSTCGSHLTVVCIFYGTGFFSYMRLGS 267 house mouse
P47883       188 FQLSCSSvhlNGQLLFVAAAFMGVAPLVLITVSYAHVAAAVLRiRSAEGRKKAFSTCSSHLTVVGIFYGTGVFSYTRLGS 267 human
XP_007657469 189 CQLSCSSnhhNQLLLFVTVIFMALIPIGFLVLSYTHIVVAILRlRSAEGLRQTFSTCASHLIMVCIFYGTGIFSYMRLGS 268 platypus
ELV09627     185 LKLSCSStraNELALFFFSFIVALAPCALVVISYIYVVAAVVRiRSAEGRRKAFSTCGAHISIVCIFYLTSVLCYILPSS 264 Chinese tree shrew
ELK13739     333 LKLSCSStqaNELALFFFSFLVALAPCTLVVISYIHVVAAVLRiRSAEGRRKAFSTCGAHITMVCIFYITSVLCYILPSS 412 black flying fox
Feature 1           ## ###  #  ##                     
P47888       274 veSSDKDKGVGVFMTVINPMLNPLIYSLRNtDVQGAL 310 human
Q60891       268 vsASDKDKGIGILNTILSPMLNPLIYSLRNpDVQGAL 304 house mouse
P47883       268 veSSDKDKGIGILNTVISPMLNPLIYWTSLlDVGCIS 304 human
XP_007657469 269 gdASEKDKVIGILNSIVSPTLNPLIYSLRNaEVKGAL 305 platypus
ELV09627     265 aySRLRDRVLSVLYVVLTPMLNPIIYSMRNkEVKKAL 301 Chinese tree shrew
ELK13739     413 aySGLRDRVLSVLYVVLTPMLNPIIYSMRNkDVKRAL 449 black flying fox

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