Conserved Protein Domain Family
7tmC_V2R_pheromone

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cd15283: 7tmC_V2R_pheromone 
vomeronasal type-2 pheromone receptors, member of the class C family of seven-transmembrane G protein-coupled receptors
This group represents vomeronasal type-2 pheromone receptors (V2Rs). Members of the V2R family of vomeronasal GPCRs are involved in detecting protein pheromones for social and sexual cues between the same species. V2Rs and G-alpha(o) protein are coexpressed in the basal layer of the vomeronasal organ (VNO), which is the sensory organ of the accessory olfactory system present in amphibians, reptiles, and non-primate mammals such as mice and rodents, but it is non-functional or absent in humans, apes, and monkeys. On the other hand, members of the V1R receptor family and G-alpha(i2) protein are coexpressed in the apical neurons of the VNO. Activation of V1R or V2R causes activation of phospholipase pathway, producing the second messengers diacylglycerol (DAG) and IP3. However, in contrast to V1Rs, V2Rs contain the long N-terminal extracellular domain, which is believed to bind pheromones.
Statistics
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PSSM-Id: 320410
Aligned: 19 rows
Threshold Bit Score: 360.438
Created: 10-Feb-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
  next features
Feature 1:putative allosteric modulator binding site [chemical binding site]
Evidence:
  • Comment:based on the binding of human mGluR1 receptor to a negative allosteric modulator FITM (contacts at 4A)

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                 #           ##  ##  #  
Q6TAC4       592 PLGTVLVSLAISLSAFSAMILGLFICYRETPiVRANNRNLSYLLLISLKLCFSCSLMFIGqprTVTCVLRQIIFGIVFSI 671 house mouse
ABK81647     592 TMGITLLSVALLGSCFTLAVTLIFALKRHTPlVRANNSEISFLILSSLLLCFLCALAFIGrptTWSCGLRHTAFGIAFSL 671 zebrafish
ELW46880     447 PLGAVLAVCTALLFLLALAILGIFIWHHQTPiVRANNHQLSYLLLSSLAFCFLCPFLFIGhpgPLTCAVRQAAFGVTFTV 526 Chinese tree shrew
Q9PSY1        92 ILGIILAAFSVAGSLVALSITLVFYKNRTSPiVKANNSELSFLLLFSLTLSFLCALTFIGrptEWSCMLRHTAFGITFVL 171 goldfish
Q4SPR7       483 SLGIALMVTAVVGACTTIAIFAVFFYHRNTPiVRVNNAELSFFILLALVLCFLCSLVFIGeptSWSCMLRHTAFSITFSL 562 spotted green p...
AEU17938     243 PLGAVLAFIAFTFSVSTAIVLAIFIMFRDTPiVKANNRDLSYILLLSLMFCFLCSLLFIGqpqKVTCILRQAVFGIAFTV 322 red-legged sala...
O35193       456 PLGMALALMAFCFSAFTAVVLCVFVKHHDTPiVKANNRSLSYLLLMSLMFCFLCSFFFIGlpnKVICVLQQITFGIVFTV 535 house mouse
Q80Z09       590 PLGKGITLLSIGFSTLTALFIWVFVDHRGTPiIKANNRSLSYILLITLILCFLCPLLFIGlpnTATCIMQQYMFGLLFTV 669 house mouse
O35269       506 PLGKTLCFMSLGFSSLTAAVLVVFLKNRDTPiVKANNLALSYTLLITLMLCFLCPLLFIGrpsTASCILQQNIFGLLFTV 585 Norway rat
XP_004919565 576 ELGMSISFLSIFFFFLTCLVMAVFNIHRTTPiVKANNQNLSYVLLFSLKMCFLCPLIFIGqpiKLTCMTRQTVFSIIFSI 655 western clawed ...
Feature 1                                                                                     #  
Q6TAC4       672 VISAILAKTFIVVMAFkaikpgsilkmgmvtrlSNAIVCCGSIIQVCICAVWLGTYPPfpdvdmhsefgqiiLWCNEGST 751 house mouse
ABK81647     672 CLSCVLGKTLVVLMAFkaslpgsnvmrwfgplqQRGIIFMCTAVQVVICCTWLCVAPPiphmlmthetariiLLCDVGSS 751 zebrafish
ELW46880     527 CVSTVLAKTIVVVAAFhatrpdawikkwagpvlPSTIPIACSLVQATLCIFWLIGWPPqpvnste-pgstvtVKCDEGSL 605 Chinese tree shrew
Q9PSY1       172 CISCVLGKTIVVLIAFkatlpgsnvmkwfgplqQRLSVLGFTLVQVLICVLWLKIYPPfpynnmhqykekiiLECSLGSA 251 goldfish
Q4SPR7       563 CFSCILGKTLVVLAAFtatrpgynimkwlgpkqQRAIIFSCTLVQVIICIAWLIEAPPapfrnteyehskviLECSVGSS 642 spotted green p...
AEU17938     323 SVSSILGKTLTVVMAFyatkpgsnirswikfgvGSYLVVFCSIIQGIICFIWLLIAPPypsydsqsvtgqviLECSEGSI 402 red-legged sala...
O35193       536 AVSTVLAKTVTVVLAFkvtdpgrrlryflvsgtLNYIIPICSLLQCVLCAIWLAVSPPfvdidehsqhghiiIVCNKGSV 615 house mouse
Q80Z09       670 ALSTVLAKTITVVMAFkitapgrkirwlltsqvPKFAIPICTLIQVLLSGIWLGTSPPfidkdyhsehghiiILCNKGSY 749 house mouse
O35269       586 ALSTVLAKTITVVIAFkitspgrirrwllisraPNFIIPLCTLLQVFLSGIWLTTSPPfidkdahsehghiiIICNKGSA 665 Norway rat
XP_004919565 656 SLSSILAKTITVVIVFhatkpgnklknlmgskvSVSIVIFCSFVQVVICACWLGISPPfpqynmedevgkiiAECNEGSL 735 western clawed ...
Feature 1          #  ##  #                                 #  ##  #   #       ##  #  #   #      
Q6TAC4       752 LAFYCVLGYLGFLASLSLLIAFLARRLPdsFNEAKTITFSMLVFCSVWISFVPAYLSskGKTMVAVEILSILASSAGLLG 831 house mouse
ABK81647     752 FAFSLVLGYIGLLAAVCFLLAFFARKLPdnFNEAKFITFSMLIFCAVWIAFVPAYISspGKYTVAVEIFAILASSYGLLL 831 zebrafish
ELW46880     606 ELFHAMLGYLGLLGLVSLLVAFPARRLPdtFNEAKHITLSMLVCSCVWVSFIPAHTSaqGKDTVAVEVFTILASGAGLMS 685 Chinese tree shrew
Q9PSY1       252 IGLWAVLGYIGLLAFLCFVLAFLARKLPdnFNEAKFITFSMLIFCAVWITFIPSYVSspGKFTVAVEIFAILASSFGLIL 331 goldfish
Q4SPR7       643 VAFWCVLGYIGLQACLSFILAFLARKLPgnFNEAKFITFSMLIFCAVWLAFIPAYVSspGNYSDAVESFAILASSFGLLF 722 spotted green p...
AEU17938     403 MAFYYVLGYIGLLASLCFIIAFLARNLPdsFNEAKFITFSMLVFCSVWVAFIPTYLSskGKYMVAVEIFAILASSAGLLG 482 red-legged sala...
O35193       616 TAFYCVLGYLACLALGSFTLAFLAKNLPdaFNEAKFLTFSMLVFCSVWVTFLPVYHStkGKHMVAVEIFSILASSAGMLE 695 house mouse
Q80Z09       750 IYFYCTLAYLGVMAFGSYLLAFLSRRLPdrFNESKSLAFSMLVFCSVWVMFLPVYHStsGKVMVAMEMFSILASSASILI 829 house mouse
O35269       666 VAFHCNLGYLGALALVSYFMAFLSRNLPdtFNEAKFLAFSMLVFCSVWVTFLPVYHStkGKNMVAMEVFSILASSTSLLG 745 Norway rat
XP_004919565 736 IGFYCVLGYLGVLASVSFIIAFLARDLPdtFNEAKFITFSMLVFCSVWVSFIPAYMSakGKYVVAVEIFAILASSLALLG 815 western clawed ...
Feature 1                    
Q6TAC4       832 CIFLPKCYVILL 843 house mouse
ABK81647     832 CIFTPKCYIILL 843 zebrafish
ELW46880     686 CLFFPKCYIILL 697 Chinese tree shrew
Q9PSY1       332 CIFAPKCFIIVF 343 goldfish
Q4SPR7       723 CMFAPKCYIILL 734 spotted green pufferfish
AEU17938     483 CIFLPKCFVIIL 494 red-legged salamander
O35193       696 CIFVPKIYIILM 707 house mouse
Q80Z09       830 IVFAPKCYIVLF 841 house mouse
O35269       746 IIFAPKCYLILL 757 Norway rat
XP_004919565 816 CIFIPKCYIILV 827 western clawed frog

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