Conserved Protein Domain Family
7tmA_LGR6

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cd15362: 7tmA_LGR6 
leucine-rich repeats-containing G protein-coupled receptor 6, the class A of 7-transmembrane GPCRs
The leucine-rich repeat containing G-protein coupled receptor LGR5, together with its family members LGR4 and LGR6, is structurally related to the glycoprotein hormone receptor family, which includes the luteinizing hormone (LH) receptor, the follicle-stimulating hormone (FSH) receptor, and the pituitary thyroid-stimulating hormone (TSH) receptor. LGR4-6 are receptors for the R-spondin (Rspo) family of secreted proteins containing two N-terminal furin-like repeats and a thrombospondin domain. The Rspo proteins are involved in regulating proliferation and differentiation of adult stem cells by potently enhancing the WNT-stimulated beta-catenin signaling. LGR5 serves as a marker for resident stem cell in numerous epithelial cell layers, including small intestine, colon, stomach, and kidney. LGR6 is a marker for multipotent stem cells in the hair follicle that generate all skin cell lineages. In addition, LGR4 is broadly expressed in proliferating cells, and its deficient mice display development defects in multiple organs. Members of this group are characterized by a very large extracellular N-terminal domain containing 17 leucine-rich repeats (LRRs), flanked by cysteine-rich N- and C-terminal capping domains, and the extracellular domain is responsible for high-affinity binding with the Rspo proteins.
Statistics
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PSSM-Id: 320484
Aligned: 6 rows
Threshold Bit Score: 390.306
Created: 15-Dec-2013
Updated: 17-Oct-2022
Structure
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Aligned Rows:
  next features
Feature 1:putative peptide ligand binding pocket [polypeptide binding site]
Evidence:
  • Comment:based on the structures of some class A family members with bound ligands (peptides or chemicals), agonists, or antagonists
  • Comment:Small-molecule chemical ligands tend to bind deeper within the receptor core, compared to a peptide ligand neurotensin, which binds towards the extracellular surface of its receptor.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                #  ##                   
Q9HBX8       562 WGIRLAVWAIVLLSVLCNGLVLLTVFAGGPvplpPVKFVVGAIAGANTLTGISCGLLASVDAltfgqfseyGARWETGlg 641  human
BAM29305     562 WLVRIGMWSISLVSLLGNSLLLLSLFGSSGnl-sPLHFTVACMGASNLLTGVCTCTLALMDAftigqfnhyGARWEGGlg 640  Japanese medaka
P0DM44       554 WVVRLGMWLISLVSLMGNSLLILTVFTSPSyl-sPVKFIIGTISGANLLTGLCTGTLALVDArtfgefalhGAQWEMGag 632  zebrafish
EOB05652     419 WIIRLGVWVIVLVSVLCNGLVILAVFASPSyl-sPVKFVIGSIAGANMLTGIYCSMLALVDAltygqfakfGARWETGtg 497  mallard
XP_005995537 548 WVVRLGVWVIVVASVICNALVILTVFASPGyl-sPVKFVIGSIAGANMLTGIDSGVLAFVDAltfgqfakyGAKWETGlg 626  coelacanth
XP_007892376 551 WVIRIGVWAIVLISVVCNGLVITTIFASPTyl-sPVKFVIGLIAAANLLTGLYNGILAIVDAltfaefakhGAKWETGlg 629  elephant shark
Feature 1        ###### ##  #                                            # #####                 
Q9HBX8       642 CRATGFLAVLGSEASVLLLTLAAVQCSVSVSCVRaYGKSPsLGSVRAGVLGCLALAGLAAALPLASVGEYgasPLCLPya 721  human
BAM29305     641 CQATGWVWVFASEASVLLLTLAAVQCGVSVTCARfYGKSPsLGSVRTCAVFCLSLSLTLASLPLVGVGDYgssPFCLPsp 720  Japanese medaka
P0DM44       633 CRAVGFLSVLASEGSILFLTLAAVQCSVSVSCARaYGKSPsLGSVRAAAVACLALSLAVAALPLIGVGEYgatPLCMPsp 712  zebrafish
EOB05652     498 CRVTGFLSVFASEAAIFLLTLAAVQCSISVSCVRgYRKAPsLGKVKAAALCCLLLSSVAAVLPLFSIGEYgasPLCLPyp 577  mallard
XP_005995537 627 CKAAGFVSVFASEASILFLTLAAVQCSISVSCVRaYGKSPsFSSVKVAALCCVVWSTTAATLPLFSVGEYgttPLCLPsp 706  coelacanth
XP_007892376 630 CRITGFMSVFASEASILFLTLAAVQCSISVSCVRaYGKSPsFSSVKIAAFCCVALSFSAAALPLCSVGEFgtsPLCLPsp 709  elephant shark
Feature 1                 #  ### ### ##                                             #  ## ##  #  
Q9HBX8       722 pp---egqpAALGFTVALVMMNSFCFLVVAGAYIKLYCDlprGDFEAVWDCAMVRHVAWLIFADGLLYCPVAFLSFASML 798  human
BAM29305     721 lpppasrlpSSLGFPLTLIMINTFCLLLVISSYIRLYCEllrGECEGLWDCAMIKHVAWLIFTNSLLYVPVAFLSLCSLL 800  Japanese medaka
P0DM44       713 lp---dgepSTLGFMVALIMMNSLCFLVITGTYIKLYWDlmkGDFDSIWDCAMIKHVAWLIFTNCLLYCPVAFLTFSSLL 789  zebrafish
EOB05652     578 ip---dgktATLGFTVALVMTNMLCFLTITGTYIRLYCNllkGEFSAVWDCAMVKHVAWLIFTNCLLYCPVAFLTFSSTL 654  mallard
XP_005995537 707 lp---dgklSSLGFTVALVMMNTLCFLVITGTYIKLYCDllkGEFDTIWDCAMIKHVAWLIFTNCLLYCPMAFLTFSSLL 783  coelacanth
XP_007892376 710 ip---dgkpSTLGFMVALIMMNTLCFLVITGTYTKLYCDlmkGEFDSIWDCAMIKHVAWLIFTNCILYCPVAFLTFSSLL 786  elephant shark
Feature 1              ## ###  #  ##                     
Q9HBX8       799 glfpvtPEAVKSVLLVVLPLPACLNPLLYLLFNphFRDDL 838  human
BAM29305     801 gllslgEEVLKSVLLLLQPLPACLNPLLFLLFTrdHSHFF 840  Japanese medaka
P0DM44       790 slfpvsEEVVKSVVLVLLPLPASINPLLYLLFNphFREDM 829  zebrafish
EOB05652     655 nlflitPEVIKSVLLVVLPLPACLNPLLYLLFNphFRDDL 694  mallard
XP_005995537 784 nlfqisPEVIKSILLVVLPLPACINPLLYLLFNphFKDDL 823  coelacanth
XP_007892376 787 nlflisPEVIKSILLVVLPLPACLNPLLYLLFNphFKEDL 826  elephant shark

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