Conserved Protein Domain Family
7tmA_OR52N-like

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cd15954: 7tmA_OR52N-like 
olfactory receptor subfamily 52N and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors
This group includes human olfactory receptor subfamily 52N and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.
Statistics
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PSSM-Id: 320620
Aligned: 4 rows
Threshold Bit Score: 464.296
Created: 17-Dec-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
  next features
Feature 1:putative ligand binding pocket [chemical binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                #  ##           ###### #
Q8NGI0        27 IWISLPFCFMYIIAVVGNCGLICLISHEEALHrPMYYFLALLSFTDVTLCTTMVPNMLCIFWfnlKEIDfnaCLAQMFFV 106 human
XP_006032167  27 IWISIPFFFAYLIGLVGNCGLLYLIWIEETLHrPMYYFLSMLSITDIAATTTVIPKAMCIFWlklKETNfnaCLVQMFFI 106 Chinese alligator
XP_007444830  27 LWISFPFFSMYLIGMVGNCGLLYIIWAEEVLHrPMYYFLCMLSVTDIIMGTSTMPKAFCIFWlnlEEISfssCLVQMYVV 106 Burmese python
XP_006032163  27 LWISIPFCSMYIIAMVGNCGLLYLIRIEDALHkPMYYFLSMLSLTDIGLVTSMVPKAMCIFWfkmKKISfnaCLTQMFFV 106 Chinese alligator
Feature 1        #  #                                            # #####                         
Q8NGI0       107 HMLTgMESGVLMLMALDRYVAICYPLrYATILtNPVIAKAGLATFLRNVMLIIPFTLlt-krLPYCRGnFIPHTYCDHMS 185 human
XP_006032167 107 HTFAgMESGVLMLMAVDRYVAISYPLrYTTILtHPIITAAGLLNFLRGMIVAAPFPLwa-krLPYCRGnVIPHTYCDHMS 185 Chinese alligator
XP_007444830 107 HTFTgMESGVLMLMALDRFVAICYPLrYATILtNPIILKVGLFTFLRGAVLILPFPFlv-rnMKYWGSrAIAHTYCDHMA 185 Burmese python
XP_006032163 107 HTFTgMESGVLMLMSLDRYLAICYPLrYASILtNPVITTAGVVTFLRGVMVIIPVVVftkrlPYCHHTnIIPHTYCDHMS 186 Chinese alligator
Feature 1                   #  ### ### ##                                            #  ## ##  # 
Q8NGI0       186 VAKVSCGNfkvNAIYGLMVALLIGVFDICCISVSYTMILQAVmslssaDARHKAFSTCTSHMCSIVITYVAAFFTFFTHR 265 human
XP_006032167 186 VVKLACASirvDAIYGLAAAGLVGGLDILCISFSYVMILRAVlglsskEARSKAFSTCTAHICAILSTYTPAFFTFFAHR 265 Chinese alligator
XP_007444830 186 VVKLACSNirvDAIYGLTVALLIGGFDILCITTSYAMILKAVvglsspEQRSKAFGTCSAHICAIVISYTPAFFTFFAHR 265 Burmese python
XP_006032163 187 VVKLACASirvDAIYGLVAALVIGGFDIFCISVSYAMILRAVvs--skEARSKAFSTCTAHICAIITSYTPALFSILAHR 264 Chinese alligator
Feature 1               ## ###  #  ##                 
Q8NGI0       266 FVghniPNHIHIIVANLYLLLPPTMNPIVYGVKTKQI 302 human
XP_006032167 266 FGghhiAPYAHIIMANLYLLLPPMLNPIIYGVKIKQI 302 Chinese alligator
XP_007444830 266 FGghhiTPHVHIIMANLYLLLPPMMNPIVYGVKTKEI 302 Burmese python
XP_006032163 265 FGshhiTAHTHILIANLYLLLPPMLNTIVYGVKTKQI 301 Chinese alligator

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