1NUB,1SRA,1BMO,2V53


Conserved Protein Domain Family
EFh_SPARC_like

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cd16231: EFh_SPARC_like 
Click on image for an interactive view with Cn3D
EF-hand, extracellular calcium-binding (EC) motif, found in secreted protein acidic and rich in cysteine (SPARC) and similar proteins
This family includes secreted protein acidic and rich in cysteine (SPARC), secreted protein, acidic and rich in cysteine-like 1 (SPARCL1), and similar proteins. SPARC is a prototypic collagen-binding matricellular protein that is involved in extracellular matrix (ECM) assembly and fibrosis through binding both fibrillar collagen and basal lamina collagen IV. It regulates the activity of matrix metalloproteinases (MMPs), as well as the growth factor signaling mediated by cell surface receptors including vascular endothelial growth factor (VEGF) receptor, basic fibroblast growth factor (bFGF), and transforming growth factor (TGF) beta1. It also shows survival activity in tumor progression. SPARC contains an N-terminal acidic 52-residue segment followed by a follistatin-like (FS) domain, and an alpha-helical EC domain with 2 unusual calcium-binding EF-hands and the collagen-binding site. SPARCL1 is the closest family member to SPARC. It shares the three primary domains contained within SPARC with an expanded N-terminal domain. SPARCL1 may function as both a tumor suppressor and as a regulator of angiogenesis. It can bind to collagens and be counter-adhesive to wild-type dermal fibroblasts, but do not influence rates of cell proliferation. Moreover, SPARCL1 can influence central nervous system (CNS) development and synaptic rearrangement.
Statistics
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PSSM-Id: 320010
Aligned: 14 rows
Threshold Bit Score: 175.231
Created: 18-Nov-2014
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 7 residues -Click on image for an interactive view with Cn3D
Feature 1:Ca binding site [ion binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                     
1NUB_A     89 CLDSELTEFPLRMRDWLKNVLVTLYerdednnlltekqklrvkki---------henekrleagdhpeknynmYIFPVHW 159 human
1SRA_A      3 CLDSELTEFPLRMRDWLKNVLVTLYerdednnlltekqklrvkkihene-krleagdhpvellardfeknynmYIFPVHW 81  human
2V53_A     90 CLDSELTEFPLRMRDWLKNVLVTLYerdednnlltekqklrvkki---------henekrleagdhpeknynmYIFPVHW 160 human
Q14515    515 CTDFEVIQFPLRMRDWLKNILMQLYeansehagylnekqrnkvkkiyldekrllagdhpidlllrdfkknyhmYVYPVHW 594 human
AAT01212  216 CGEHELSEYPTRMRSWIKNIYLQMYdeaedmgglnekqrfhgrklvanrdrlqtyeehhidlmsrefqkfyplYKYPIHW 295 vase tunicate
EEN69688   87 CLEEELAEFPLRMRDWLKNVLVQRMslelltdkemfhakkiyederrlk-kradggdweaeillrdfrknyahYVYPIHW 165 Florida lancelet
P34714    141 CTEEHMAQFPERMADWLFQVMKELKkrrelhklewee------------------------llseaenddekkHVYPVIW 196 Caenorhabditis ele...
ABK33665  151 CSAEDLREYPERMTNWFIKSLALIRnrpeehgglsqk-------------------------eketlqqewsqSTHAIFW 205 purple sea urchin
BAB20042  158 CSEQEMDDFPRRMRDWLFNIMRDLAarhelsphylkl-------------------------ekeaeveqskrWANAAIW 212 Artemia franciscana
AAL49360  171 CEGEDLKDFPRRMRDWLFYVMRDLAerdeltehymqm-------------------------eleaetnnsrrWSNAAVW 225 fruit fly
Feature 1          #    #      #                      # # #      #         
1NUB_A    160 QFGQLDqhPIDGYLSHTELAPLRAPLIpMEHCTTRFFETCDLDNDKYIALDEWAGCFGIKQ 220 human
1SRA_A     82 QFGQLDqhPIDGYLSHTELAPLRAPLIpMEHCTTRFFETCDLDNDKYIALDEWAGCFGIKQ 142 human
2V53_A    161 QFGQLDqhPIDGYLSHTELAPLRAPLIpMEHCTTRFFETCDLDNDKYIALDEWAGCFGIKQ 221 human
Q14515    595 QFSELDqhPMDRVLTHSELAPLRASLVpMEHCITRFFEECDPNKDKHITLKEWGHCFGIKE 655 human
AAT01212  296 KFGILDvnPTDKYLSKRELEPMRAPLVpLEHCTDTFFSTADANKDHLISLYEWAEALGLQE 356 vase tunicate
EEN69688  166 MFSKLDihPKDRYLTHAELAPLRAPLVpMEHCTTTFFKTCDDDGDKRISLYEWGACLELKE 226 Florida lancelet
P34714    197 KFCELDtkPHDKSVSHHELIPITAPVIpMESCIKPFLEGCDANNDGNISIKEWGKCLGLKE 257 Caenorhabditis elegans
ABK33665  206 KFDRLDknPSDHYLDFAELEGLRAPIVlFEPCTKPFLQACDVDNDTLISAVEFGRCLNLSD 266 purple sea urchin
BAB20042  213 KFCDLDghPHDRKVSRHELFPIKAPLMaLEHCISPFLNKCDVDDDHFITLREWGKCLEIPE 273 Artemia franciscana
AAL49360  226 KWCDLDg-DTDRSVSRHELFPIRAPLVsLEHCIAPFLESCDSNKDHRITLVEWGACLELDP 285 fruit fly

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