Conserved Protein Domain Family
EFh_UTRO

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cd16247: EFh_UTRO 
EF-hand-like motif found in utrophin
Utrophin, also termed dystrophin-related protein 1 (DRP-1), is an autosomal dystrophin homologue that increases dystrophic muscle function and reduces pathology. It is broadly expressed at both the mRNA and protein levels, and occurs in the cerebrovascular endothelium. Utrophin forms the utrophin-glycoprotein complex (UGC) by interacting with the dystroglycans (DGs) and the sarcoglycan-dystroglycans, sarcoglycans and sarcospan (SG-SSPN) subcomplex. It may act as a scaffolding protein that stabilizes lipid microdomains and clusters mechanosensitive channel subunits, and link the F-actin cytoskeleton to the cell membrane via the associated glycoprotein complex. Like dystrophin, Utrophin has a compact cluster of domains comprising four EF-hand-like motifs and a ZZ-domain, followed by a looser region with two coiled-coils. These domains are believed to be involved in protein-protein interactions. In addition, it contains two syntrophin binding sites (SBSs) and a long N-terminal extension that comprises two actin-binding calponin homology (CH) domains, up to 24 spectrin repeats (SRs) and a WW domain. However, utrophin lacks the intrinsic microtubule binding activity of dystrophin SRs.
Statistics
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PSSM-Id: 320005
Aligned: 5 rows
Threshold Bit Score: 332.246
Created: 12-Nov-2014
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1:EF-hand-like motif [structural motif]
Evidence:
  • Comment:The EF-like motifs don't contain the canonical pattern of calcium binding residues.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1         ########################################                                        
P46939       2882 ELSTTNEIFKQHKLNQNDQLLSVPDVINCLTTTYDGLEQMhkdlvnVPLCVDMCLNWLLNVYDTGRTGKIRVQSLKIGLM 2961 human
Q4S6Z2       2604 DLNVAQNTFKQHKLTNNSQLLSVPDIINCLTSIYDGLEQEhkdlvnVPLCVDMCLNWLLNVYDTGRSGKIRVLSMKIGLL 2683 spotted green...
O73621         40 DLTTTHSVFKQHELNQNNQLLSVPEVINVLTTIYDGLEQKhkelvnVPLCVEMCLNWLLNVYDTGRTGKLRVLSLKIGLM 119  African clawe...
XP_007892646 3099 DLNTAHSIFEQHKLTQNEQLLNVTEVINCLTTIYDGLEQShkdlvnVPLCVDMCLNWLLNVFDTGRSGKIRVLSLKIGLM 3178 elephant shark
KFV01425        7 DLNTTSEVFKQHKLSQNDQLIGVQDVISCLTTIYSGLEEKhkdmvnVPLCVDMCLNWLLNVYDSGRTGKIRVQSLKIGLM 86   red-crested t...
Feature 1                                                                                         
P46939       2962 SlskglLEEKYRYLFKEVAGPTEMCDQRQLGLLLHDAIQIPRQlgevaafggsniEPSVRSCFQQNNNKPEISVKEFIDW 3041 human
Q4S6Z2       2684 SlckghLEEKYKYLFSQVASAGDTCDQRQLGLLLHEAIQIPRQlgevaafggsniEPSVRSCFQHVNNKVELEPRQFVDW 2763 spotted green...
O73621        120 ClskglLEEKYRHLFKEVCGAGDTCDQRQLSLMLHDAIQIPRQlgevaafggsniEPSVRSCFQHAQNKPEIDVNHFIEW 199  African clawe...
XP_007892646 3179 SlskglLEEKYKNLFKQVAGPNAQCDQRGLSHLLHDAIQIPRQlgevasfggsniEPSVRSCFQHAQNKTEIDVKLFVEW 3258 elephant shark
KFV01425       87 SlskglLEEKYRYLFKEVAGPTEMCDQRQLGLLLHDAIQIPRQlgevaafggsniEPSVRSCFQQNHNKPEITVKQFIDW 166  red-crested t...
Feature 1           
P46939       3042 MH 3043 human
Q4S6Z2       2764 MR 2765 spotted green pufferfish
O73621        200 MR 201  African clawed frog
XP_007892646 3259 MR 3260 elephant shark
KFV01425      167 MR 168  red-crested turaco

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