1F9Z,5D7Z,2C21,4MTQ,5D7Z


Conserved Protein Domain Family
GlxI_Ni

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cd16358: GlxI_Ni 
Click on image for an interactive view with Cn3D
Glyoxalase I that uses Ni(++) as cofactor
This family includes Escherichia coil and other prokaryotic glyoxalase I that uses nickel as cofactor. Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic glyoxalase I uses nickel. However, eukaryotic Trypanosomatid parasites also use nickel as a cofactor, which could possibly be explained by acquiring their GLOI gene by horizontal gene transfer. Human glyoxalase I is a two-domain enzyme and it has the structure of a domain-swapped dimer with two active sites located at the dimer interface. In yeast, in various plants, insects and Plasmodia, glyoxalase I is four-domain, possibly the result of a further gene duplication and an additional gene fusing event.
Statistics
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PSSM-Id: 319965
Aligned: 10 rows
Threshold Bit Score: 200.7
Created: 7-Jan-2016
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 14 residues -Click on image for an interactive view with Cn3D
Feature 1:active site [active site]
Evidence:
  • Citation:PMID 9218781
  • Comment:There are two active sites between the dimer interface.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1          #   #                        #    # #              # # #             #        
1F9Z_A         3 LLHTMLRVGDLQRSIDFYTKvLGMKLLRTSENPeyKYSLAFVGYgpeteeAVIELTYNWGvdKYELGtAYGHIALSVDNA 82  Escherichia coli
5D7Z_A       155 LCQVMLRVGDLERSIKFYEKaLGMKLLRKKDVPdyKYTIAMLGYadedktTVLELTYNYGvtEYSKGnAYAQVAIGTNDV 234 Zea mays
2C21_A         9 MLHTMIRVGDLDRSIKFYTErLGMKVLRKWDVPedKYTLVFLGYgpemssTVLELTYNYGvtSYKHDeAYGHIAIGVEDV 88  Leishmania major
4MTQ_A         3 ILHSMLRVADLEAALEFYTRaLDMRLLRRRDYPegRFTLAFVGYqderaaAALELTHNWDrdGYTQGdGYGHLAIEVEDA 82  Pseudomonas aer...
5D7Z_A        25 MLHAVYRVGDLDRTIKYYTEcFGMKLLRKRDVPdeKYTNAFLGFgpentnFAVELTYNYGvdKYDIGtGFGHFAIANDDV 104 Zea mays
Q55595         3 LLHTMIRVGDLDKSLQFYCDiLGMNLLRKKDYPsgEFTLAFVGYgkesenAVIELTHNWGtdKYDLGnGFGHIALGVEDI 82  Synechocystis s...
P0A0T3         3 LLHTMLRVGNLEKSLDFYQNvLGMKLLRRKDYPegRFTLAFVGYgdetdsTVLELTHNWDteRYDLGnAYGHIAVEVDDA 82  Neisseria menin...
XP_635103      4 ILHTMLRVGNLEKSLQFYIDvLGMKLLRKSENVeyKYTLAFVGYtnedenAVIELTYNWGveKYELGtAFGHIAIGVDDV 83  Dictyostelium d...
CAM75111       5 MLHTMIRVGNLDASIDFYTRlLGMKLLRRQDYPdgRFTLAFVGYgdeadnTVIELTHNWDtaSYDLGtGFGHVALGVPDI 84  Magnetospirillu...
XP_001765036   1 MLHVVYRVGDLDKTIKFYTEcLGMKLLRRRDIPeeKYTNAFLGYgpedtnFVVELTYNYGvdKYDIGtGFGHFGIAVEDV 80  Physcomitrella ...
Feature 1                           #           # #       # #  
1F9Z_A        83 AEACEKIRQn----gGNVTReagpvkggttvIAFVEDPDGYKIELI 124 Escherichia coli
5D7Z_A       235 YKSAEAVDLatkelgGKILRqpgplpgintkIASFVDPDGWKVVLV 280 Zea mays
2C21_A        89 KELVADMRKh----dVPIDYede-----sgfMAFVVDPDGYYIELL 125 Leishmania major
4MTQ_A        83 AVTCARARAl----gYRVTReaglmqhgrsvIAFLEDPDGYKVELI 124 Pseudomonas aeruginosa PAO1
5D7Z_A       105 YKLAENIKSk----gGKITRepgpvkggstvIAFAQDPDGYMFELI 146 Zea mays
Q55595        83 YSTCDKIRDk----gGKVVRepgpmkhgttvIAFVEDPDGYKIELI 124 Synechocystis sp. PCC 6803
P0A0T3        83 YEACERVKRq----gGNVVReagpmkhgttvIAFVEDPDGYKIEFI 124 Neisseria meningitidis serogroup B
XP_635103     84 YETVERIRKs----gGKVAReaapvlggttvIAFVEDPDNYKIELI 125 Dictyostelium discoideum AX4
CAM75111      85 HATCVQLAQa----gAKITRppgpmkhgstiIAFIEDPDGYKIELI 126 Magnetospirillum gryphiswaldense MSR-1
XP_001765036  81 QKVVDLVKAk----gGKVTRepgpvkggksiIAFVEDPDGYKFELI 122 Physcomitrella patens subsp. patens

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