Conserved Protein Domain Family
YitT_C_like_1

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cd16381: YitT_C_like_1 
Proteins similar to the C-terminal domain of Bacillus subtilis YitT
This domain, characteristic of various bacterial proteins, has no known function. It has been given the designation DUF2179 and is similar to the C-terminus of the Bacillus subtilis membrane protein.
Statistics
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PSSM-Id: 319865
View PSSM: cd16381
Aligned: 232 rows
Threshold Bit Score: 63.2209
Threshold Setting Gi: 737375877
Created: 18-Feb-2016
Updated: 18-Aug-2016
Structure
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Aligned Rows:
Conserved Features/SitesClick to see Conserved Features Help
 
putative dimer
Feature 1:putative dimer interface [polypeptide binding site]
Evidence:
  • Comment:by similarity to other members of this family

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Feature 1             #                            ###   # #               #  ##     #### #      
gi 122640437  88 GYIMVTTILpansaEDKSLPGILREHGYGVTQTSAMGl-eGERLVLEILSPRKSERELYRLIKEIeerAFIISYePKYIS 166
gi 974219583  91 GYVQVNIISl---hFSDKIATALRKLKYGVTILPAEGg-tGGTSILIVFSKRKHQKKLIETVEKIddkAFITINqARPYR 166
gi 973114335  94 GYSQISIISr---aHGPEIAKALREHDFAVTEIPAQGk-dGTVLLLHCSVQRKKVGEVQKAILDVdpnAFLTVEdIILQR 169
gi 934107310  94 GHVQLNIVSt---tLGSAVAAALRANGFAVTEVPARGk-dGTVTLLHADVNRNDVDNAETVILEAdptAFITAEdVRPMR 169
gi 909536602  94 GYKKISIISr---dSGSEIASALRDAGYGVTELCGKGk-dGDVCMLHANIKRKHVKDVEKIVNGIdknAFITSDdFNPVN 169
gi 504373248  89 GFVQLNIISr---nHSKEIAELLRKNKYGVTILPAEGt-sGGLSILVTIIPRKFQKATISLIESVdknAFITVQ-HSLPY 163
gi 931516128  94 GHGHLRIISs---rRGKAIVEAIRDEGYAVTEISGHGk-dGTVSVISCSVKRREIDNVQRRVHAMdpeAFITVEdIRPLH 169
gi 913163975  98 GHIQLTIISa---tRGAAVCDALRIAGFGVTEIPGRGk-nGTVSVILTNVFRKDVDHLETIIMETdpeAFVTREdVRPMR 173
gi 524046041  89 GNLSLQIIT-----NKLEIVNKLRDEGYGVTVMDALGiddSEKYMLFVEINKKSYEHVHNIIKQIdskAFTVASeTKYIQ 163
gi 973155288  94 GYTHFSIISr---sHSTEIADALRTEGYGVTEIPARGr-eSNFMLVDCHVRRKQADDVEVLALKIdpdAFITAEeVTPRR 169

                 ....
Feature 1            
gi 122640437 167 GGFW 170
gi 974219583 167 GFFH 170
gi 973114335 170 HGYW 173
gi 934107310 170 AGFW 173
gi 909536602 170 RSGF 173
gi 504373248 164 RGFM 167
gi 931516128 170 RGYW 173
gi 913163975 174 RGFW 177
gi 524046041 164 NGFI 167
gi 973155288 170 SGIW 173

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