2HWJ,2HWJ


Conserved Protein Domain Family
ParB_N_Srx_like

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cd16390: ParB_N_Srx_like 
Click on image for an interactive view with Cn3D
uncharacterized family distantly related to the N-terminal domain of the ParB/Srx superfamily
Uncharacterized proteins distantly related to the N-terminal domain of the ParB superfamily, primarily involved in bacterial and plasmid parABS-related partitioning systems. A small minority of proteins in this family include a C-terminal inorganic pyrophosphatase domain. Also within the ParB superfamily is sulfiredoxin (Srx), which is a reactivator of oxidatively inactivated 2-cys peroxiredoxins. Other families includes a putative regulator in the biosynthetic gene cluster and a family containing a Pyrococcus furiosus nuclease and putative transcriptional regulators SbnI (Staphylococcus aureus siderophore biosynthetic gene cluster ) and EdeB (Brevibacillus brevis antimicrobial peptide edeine biosynthetic cluster). Nuclease activity has also been reported in Arabidopsis Srx.
Statistics
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PSSM-Id: 319249
Aligned: 110 rows
Threshold Bit Score: 69.5149
Created: 29-Mar-2013
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
putative activehomodimer
Conserved site includes 5 residues -Click on image for an interactive view with Cn3D
Feature 1:putative active site [active site]
Evidence:
  • Comment:Putative active site residues by comparison to ParB N-terminal domain-containing superfamily proteins such as Osa and Srx

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                      # #                                                            
2HWJ_E      9 LSRIAIDKLRPTQiaVGFREVELKRKEWREtrkk---------------------------------------------- 42  Agrobacterium fabr...
EKE80939   23 EVTLTIAKLHPTQavLAYDQVTKKIDKYQHqqka---------------------------------------------- 56  Idiomarina xiamene...
CBW27147   39 LEFISLSNIHPTQafVGHDQIPLKIEKIQKklkkk--------------------------------------------- 73  Bacteriovorax mari...
EUJ28358   35 RYDVPIQSIHPTQadLGKVQMAYKLTTYINengqltedyfadfnddngykkgkylspdgteklqdkakyktadlrdtlqa 114 Listeria grayi FSL...
AIN18555   58 IIQIKLSELHPTQiaVGKLQIAGDLADYAQdykrlfnelckvqgagklae--------------mnasstpkdpssyrck 123 Yersinia kristensenii
CAL57839   76 RWSDVRASVRPTQvaLGWDWTFYKLSNFKDles----------------------------------------------- 108 Ostreococcus tauri
EUJ36145   35 VYDVPISSLHPTQagIGKIQISYKLTEYLAndaaltasffedfnedngyikgnyltadtqtpkqdknllktvnmreelga 114 Brochothrix thermo...
KDA49217   34 EYNVPISTIHPIQaaVGKAQIASKISTYVEngaltknyyndfnddngynnglysln---gvsqtdkttyktnsiqsvipd 110 Leuconostoc pseudo...
EOD35934  103 AWSALRTKVHPTQ--VSVGYVWALKHKVEKmysee--------------------------------------------- 135 Emiliania huxleyi ...
EGM77846   28 VLEVRLADLKPTQavIAHDQVNYKLASYRNdhkklvedfcemsgwgkkvelk-----------aepsllqsdsyqclgke 96  Rheinheimera sp. A13L
Feature 1                             # ##                                                    
2HWJ_E     43 dgddFLGNHIVPVVAGpkDRAYLIDHHHLVLALSKEGVe------HVLTSEVAKFShl------gKDEFWSVXdh--rNL 108 Agrobacterium fabr...
EKE80939   57 fnkdLNELPRKTVVLGpaGQYYLTDGHHTFSAMREFSPlra--eqPVTVRVTADKSdl------sQTEFWQWLva--nDQ 126 Idiomarina xiamene...
CBW27147   74 kldsYLKEKWSPAIIGpdEKYWILDRHHLSYALLKSDIadk--ykGLYIRVLHDWSsy------sWNHFYNSMkr--eNL 143 Bacteriovorax mari...
EUJ28358  115 vvdpDVSTPAVTVVIGpdQQYYAIDGHHGANSYLLTKAitgsgsdKVNITVVGDYSdl------sGAAFWKKMaannqYY 188 Listeria grayi FSL...
AIN18555  124 laigTKKADMNTVDIGptGKLYLTDGHHAFNSFWDVPGggg--dvALSVLVGQNVSrdsngkaltQAQFEQKMte--lKH 199 Yersinia kristensenii
CAL57839  109 -attYMARKPVPYVKYr-GLRYVVDHHHTLAALNLTGWd-----vDVYMEEIFEYDdd-----ldDATFWGIMeg--kGW 174 Ostreococcus tauri
EUJ36145  115 lvnpALGSLSVQVVIGphKEYYAIDGHHGSNTNQLIKEmtglgydKINVAVIADYSdl------dEKTFWQTMlaqkyMY 188 Brochothrix thermo...
KDA49217  111 aqltNDSTAKVPVIKGpgGTLYATDGHHGSTTYEFIKQqynlgfdTINVEVIADYSsl------sMADFYKKLiannqVL 184 Leuconostoc pseudo...
EOD35934  136 saqeRMDGKHIPCIKRg-SELYFSDGHHTLSALDSSGFwhlaardAVTIVVLCDLTal------sVADFWATMge--kGF 206 Emiliania huxleyi ...
EGM77846   97 kgkkQKKSAMNTVVLGpdQQLYLTDGHHGFSALYDYVGae----lKVSVLVTDVFDkaqh-qsanNHDFLRQLva--qGL 169 Rheinheimera sp. A13L
Feature 1                                                                                   
2HWJ_E    109 IYPFDAQGL-------RRQSGDIPKNIHDl-------eDDPFRSLAGALRXAGgyakv----iipfSEFGWADFLRRR 168 Agrobacterium fabrum...
EKE80939  127 VWLRDGRGQ-------LVEIDDMPRQVGRef-----maDDPLRGAMYWLRDRYlrkpe---kaipfVEFYWAQYVREH 189 Idiomarina xiamenens...
CBW27147  144 FYLKNCKFE-------EISPEEIPTQINTl-------gNNPYRSLAYFAREKGcfnkv----dipyLEFMWGEFFYRN 203 Bacteriovorax marinu...
EUJ28358  189 PKAFNLQTHry----qTIDPERLPKQMGSeq-----fiNDPFRSLNYFMRKSVidkda---isvpfAEFYWGEFLTET 254 Listeria grayi FSL F...
AIN18555  200 FLPIDAEGK-------SITFSQLPNTLGIsg-----fqDDPYRSMLYYLRGISydksdk-nlnpetGKPYPAVPFLEF 264 Yersinia kristensenii
CAL57839  175 SFCWDSNYQ-------RLSYADIPTSFELqa-----frNDIFRSLGGFCRKDKllkrgkmledklfFEFQWGYFFWLH 240 Ostreococcus tauri
EUJ36145  189 PKAYNVATHqy----eTISGLKLPKQMNNql-----fvNDPFRGLNYFWRSTAinkdt---isvpfAEFYWGEFMSRT 254 Brochothrix thermosp...
KDA49217  185 PMAFNVKTGey----qSFSLDRLPTHMYAne-----fvNDPFRSLAYFWRKSAidkdn---vtanfAEFYLGMFLTST 250 Leuconostoc pseudome...
EOD35934  207 AYLYGRPSGpwtslpePLAFSALPSLVVFnnheppsftDDPWRALSGASRKISnqksck--aaasnTKYCMRAYDRVC 282 Emiliania huxleyi CC...
EGM77846  170 SWPKDANGK-------ALPAQQWPKQLGRaa-----lhNDPYRGAAYFLQGGVwkkpk---palpfVEFYWADYLRQQ 232 Rheinheimera sp. A13L

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