Conserved Protein Domain Family
RING-HC_RNF5-like

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cd16534: RING-HC_RNF5-like 
RING finger, HC subclass, found in RING finger protein RNF5, RNF185 and similar proteins
RNF5 and RNF185 are E3 ubiquitin-protein ligases that are anchored to the outer membrane of the endoplasmic reticulum (ER). RNF5 acts at early stages of cystic fibrosis (CF) transmembrane conductance regulator (CFTR) biosynthesis, and functions as a target for therapeutic modalities to antagonize mutant CFTR proteins in CF patients carrying the F508del allele. RNF185 controls the degradation of CFTR and CFTR F508del allele in a RING- and proteasome-dependent manner, but does not control that of other classical endoplasmic reticulum-associated degradation (ERAD) model substrates. Moreover, both RNF5 and RNF185 play important roles in cell adhesion and migration through the modulation of cell migration by ubiquitinating paxillin. Arabidopsis thaliana RING membrane-anchor proteins (AtRMAs) are also included in this family. They possess E3 ubiquitin-protein ligase activity and may play a role in the growth and development of Arabidopsis. All members of this family contain a C3HC4-type RING-HC finger.
Statistics
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PSSM-Id: 438196
Aligned: 25 rows
Threshold Bit Score: 75.8001
Created: 3-May-2013
Updated: 17-Oct-2022
Structure
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Aligned Rows:
 
Zn binding site
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C H C C C CClick to see conserved feature residue pattern help
Evidence:
  • Comment:based on the structures of other RING-HC fingers with bound zinc
  • Comment:C3HC4-type RING-HC finger consensus motif: C-X2-C-X(9-39)-C-X(1-3)-H-X(2-3)-C-X2-C-X(4-48)-C-X2-C, where X is any amino acid and the number of X residues varies in different fingers
  • Comment:A RING finger typically binds two zinc atoms, with its Cys and/or His side chains in a unique "cross-brace" arrangement.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1          #  #            # #  #  #                                                     
Q96GF1        37 FECNICLDTa-kDAVISLCGHLFCWPCLHQWLetrp-------------------------------------------- 71  human
KII60587      12 YTCGICFETa-rDPVVTPCGHLFCWPCLNTWLeig--------------------------------------------- 45  Thelohanellus k...
EKX33137      30 FICHICLNSp-dKPIATVCGHLYCWGCIYKWLmlhr-------------------------------------------- 64  Guillardia thet...
XP_002296664  70 FICAICLETvsdEPVVTRCGHLYCWPCLYQWLepgillneyhaafgggeidnvsrnnsnggsrvglnflqdinmasynqq 149 Thalassiosira p...
ACO70267      60 FECNICLELa-qEPVVTQCGHLYCWSCIYKWLqvfp-------------------------------------------- 94  Micromonas sp. ...
EAN78052       6 FSCAICYEVa-sEPVVTRCGHLFCWRCLSRWLhpprs------------------------------------------- 41  Trypanosoma bru...
EFC35284     138 WSCNICFDTa-sEPVITQCGHLYCWSCIYRWMqshs-------------------------------------------- 172 Naegleria gruberi
BAM79379      73 FDCSICFEVpleDPVVTMCGHLFCWSCLHRWMaq---------------------------------------------- 106 Cyanidioschyzon...
XP_002764849  39 FECNICFDQa-sEPVVTRCGHLFCWSCLDQWLdr---------------------------------------------- 71  Perkinsus marin...
ETO14215      49 FDCNICFDVc-sDPVVTCCGHLYCWQCLEKWLdr---------------------------------------------- 81  Reticulomyxa fi...
Feature 1                           #  # 
Q96GF1        72 ---------------nrqVCPVCK 80  human
KII60587      46 ---------------skaTCPMCN 54  Thelohanellus kitauei
EKX33137      65 ---------------ddsQCPVCK 73  Guillardia theta CCMP2712
XP_002296664 150 athqpynpsggryneqrrYCPVCK 173 Thalassiosira pseudonana CCMP1335
ACO70267      95 ---------------eaqQCPVCK 103 Micromonas sp. RCC299
EAN78052      42 --------------avntECPVCR 51  Trypanosoma brucei brucei TREU927
EFC35284     173 --------------tqnlQCPVCK 182 Naegleria gruberi
BAM79379     107 ----------------haTCPVCK 114 Cyanidioschyzon merolae strain 10D
XP_002764849  72 ----------------sgECPVCK 79  Perkinsus marinus ATCC 50983
ETO14215      82 ----------------sqTCPVCQ 89  Reticulomyxa filosa

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