Conserved Protein Domain Family
mRING-HC-C3HC3D_TRAF7

?
cd16644: mRING-HC-C3HC3D_TRAF7 
Modified RING finger, HC subclass (C3HC3D-type), found in tumor necrosis factor (TNF) receptor-associated factor 7 (TRAF7) and similar proteins
TRAF7, also known as RING finger and WD repeat-containing protein 1 or RING finger protein 119 (RNF119), is an E3 ubiquitin-protein ligase involved in signal transduction pathways that lead either to activation or repression of NF-kappaB transcription factor by promoting K29-linked ubiquitination of several cellular targets, including the NF-kappaB essential modulator (NEMO) and the p65 subunit of NF-kappaB transcription factor. It is also involved in K29-linked polyubiquitination that has been implicated in lysosomal degradation of proteins. Moreover, TRAF7 is required for K48-linked ubiquitination of p53, a key tumor suppressor and a master regulator of various signaling pathways, such as those related to apoptosis, cell cycle and DNA repair. It is also required for tumor necrosis factor alpha (TNFalpha)-induced Jun N-terminal kinase activation and promotes cell death by regulating polyubiquitination and lysosomal degradation of c-FLIP protein. Furthermore, TRAF7 functions as small ubiquitin-like modifier (SUMO) E3 ligase involved in other post-translational modification, such as sumoylation. It binds to and stimulates sumoylation of the proto-oncogene product c-Myb, a transcription factor regulating proliferation and differentiation of hematopoietic cells. It potentiates MEKK3-induced AP1 and CHOP activation and induces apoptosis. Meanwhile, TRAF7 mediates MyoD1 regulation of the pathway and cell-cycle progression in myoblasts. It also plays a role in Toll-like receptors (TLR) signaling. TRAF7 contains an N-terminal domain with a modified C3HC3D-type RING-HC finger and an adjacent zinc finger, and a unique C-terminal domain that comprises a coiled coil domain and seven WD40 repeats.
Statistics
?
PSSM-Id: 438306
Aligned: 16 rows
Threshold Bit Score: 82.0162
Created: 7-May-2013
Updated: 17-Oct-2022
Structure
?
Aligned Rows:
 
Zn binding site
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C H C C C DClick to see conserved feature residue pattern help
Evidence:
  • Comment:based on the structures of other proteins with a C3HC3D-type RING finger with bound Zn2+ ions
  • Comment:modified RING-HC finger (C3HC3D-type)
  • Comment:consensus of the typical C3HC4-type RING-HC finger: C-X2-C-X(9-39)-C-X(1-3)-H-X(2-3)-C-X2-C-X(4-48)-C-X2-C, X is any amino acid and the number of X residues varies in different fingers.
  • Comment:A RING finger typically binds two zinc atoms, with its Cys and/or His side chains in a unique "cross-brace" arrangement.

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1               #  #           # #  #  #          #  #    
Q6Q0C0       124 QPSVKLCCQLCCSVFKDPVITTCGHTFCRRCALKs----eKCPVDNVKL 168 human
EDO48004     126 KPSPKLFCPLCRRVFKDPVITSCGHTFCQACIMArg--veKCPLDDNKL 172 starlet sea anemone
EDV28456       5 EPSKNLRCLLCQRIMKEPVVASCGHTFCKRCIETsvlgneRCPSDNNTL 53  Trichoplax adhaerens
XP_007904645 124 QPSVKLCCQLCCSIFKDPVITTCGHTFCRRCALTs----eKCPVDNAKL 168 elephant shark
XP_006823995  81 PPNKKLYCILCKKVYKDPVITQCGHTYCKQCVTRgg--hdKCPIDESKL 127 Saccoglossus kowalevskii
XP_011681795 168 QPNRTLYCLLCRSVFQDPVITQCGHTYCRKCVTSrq--feKCPVDTMKL 214 purple sea urchin
ELU10500      49 PPNRKLYCLLCNKVFTEPVIVSCGHSFCRRCVLDri--nePCPVDRMNL 95  Capitella teleta
BAE93307     152 TPSAQLYCKICQQVYKDPVIMSCGHSYCKHCSVSv----dACPVDNKKM 196 vase tunicate
KJE94942     257 PPSEKLYCGMCGKIFTDPVIAQCGHTFCRHCVEHapa-grGCPTHKMQL 304 Capsaspora owczarzaki ATCC 30864
XP_013417562 120 PPNKKLCCPICGKVFKEPVITGCGHTFCRRCATGgq--ddICPIDQKKL 166 Lingula anatina

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap