Conserved Protein Domain Family
RING-HC_RBR_TRIAD1

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cd16773: RING-HC_RBR_TRIAD1 
RING finger, HC subclass, found in two RING fingers and DRIL [double RING finger linked] 1 (TRIAD1)
TRIAD1, also known as ariadne-2 (ARI-2), protein ariadne-2 homolog, Ariadne RBR E3 ubiquitin protein ligase 2 (ARIH2), or UbcM4-interacting protein 48, is an RBR-type E3 ubiquitin-protein ligase that catalyzes the formation of polyubiquitin chains linked via lysine-48, as well as lysine-63 residues. Its auto-ubiquitylation can be catalyzed by the E2 conjugating enzyme UBCH7. TRIAD1 has been implicated in hematopoiesis, specifically in myelopoiesis, as well as in embryogenesis. It functions as a regulator of endosomal transport and is required for the proper function of multivesicular bodies. It also acts as a novel ubiquitination target for proteasome-dependent degradation by murine double minute 2 (MDM2). As a proapoptotic protein, TRIAD1 promotes p53 activation, and inhibits MDM2-mediated p53 ubiquitination and degradation. Furthermore, TRIAD1 can inhibit the ubiquitination and proteasomal degradation of growth factor independence 1 (Gfi1), a transcriptional repressor essential for the function and development of many different hematopoietic lineages. TRIAD1 contains an RBR domain that was previously known as RING-BetweenRING-RING domain or TRIAD [two RING fingers and a DRIL (double RING finger linked)] domain. Based on current understanding of the structural biology of RBR ligases, the nomenclature of RBR has been corrected as RING-BRcat (benign-catalytic)-Rcat (required-for-catalysis) recently. The RBR (RING1-BRcat-Rcat) domain uses an auto-inhibitory mechanism to modulate ubiquitination activity, as well as a hybrid mechanism that combines aspects from both RING and HECT E3 ligase function to facilitate the ubiquitination reaction. This model corresponds to the RING domain, a C3HC4-type RING-HC finger required for RBR-mediated ubiquitination.
Statistics
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PSSM-Id: 438429
Aligned: 39 rows
Threshold Bit Score: 63.9106
Created: 5-Aug-2013
Updated: 17-Oct-2022
Structure
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Aligned Rows:
 
Zn binding site
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C H C C C CClick to see conserved feature residue pattern help
Evidence:
  • Comment:based on the structures of other RING-HC fingers with bound zinc
  • Comment:C3HC4-type RING-HC finger consensus motif: C-X2-C-X(9-39)-C-X(1-3)-H-X(2-3)-C-X2-C-X(4-48)-C-X2-C, where X is any amino acid and the number of X residues varies in different fingers
  • Comment:A RING finger typically binds two zinc atoms, with its Cys and/or His side chains in a unique "cross-brace" arrangement.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1           #  #              # #   #  #                                      #    #  
O95376        137 HHCAVCMQFvr-kENLLSLACQH-QFCRSCWEQHCSVLVKDGvg--------------------vgVSCMaqDCPL 190  human
XP_024366422  133 VRCGTCLEDvp-tTTATRMDCGH-AFCNECWTQYFIIKIKDGqs--------------------rrVTCMehNCGA 186  Physcomitrium patens
XP_024515823  112 VTCGICFDDvp-qADATQMDCGH-AFCNDCWLENFTVKIMEGes--------------------rkLKCMafKCAT 165  Selaginella moell...
XP_636442    1336 IVCLVCFSDvt-kQKAYSLQCNH-SYCIDCWYSYLAISVDSGktc-------------------lyTKCIepNCKY 1390 Dictyostelium dis...
Q949V6        121 MSCDVCMEDlp-gDHMTRMDCGH-CFCNNCWTEHFTVQINEGqs--------------------krIRCMahQCNA 174  thale cress
Q9LVW9        117 MKCDICMEEdlskYAMTRMECGH-RFCNDCWKEHFTVRINEGeg--------------------krIRCMayKCNT 171  thale cress
XP_004333261  425 VECLVCADDvk-aSKVFSLACGHgPYCDGCWQYHLSVVVKNSsaeg-----------------ilnSTCMwpRCPI 482  Acanthamoeba cast...
XP_641886     213 ESCSVCADDld-sLNGSYLPCKH-YSCNDCWNQYLSLKVLEGga--------------------tsITCMglKCPS 266  Dictyostelium dis...
XP_004344619  215 GDCLICGDEmt-aEDASISRCGH-AFCNICWQGTMTCPACSRrpfrpksdctgylevkikegealgIPCMmhKCGK 288  Acanthamoeba cast...
Q6T486        137 VSCLICLEDyp-pTQTFALICNH-RYCLPCYKNYLEIKVSEGpec-------------------iyTPCPapKCKV 191  Dictyostelium dis...

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