Conserved Protein Domain Family
mRING-HC-C3HC5_NEU1B

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cd16786: mRING-HC-C3HC5_NEU1B 
Modified RING finger, HC subclass (C3HC5-type), found in neuralized-like protein 1B (NEURL1B)
NEURL1B, also known as neuralized-2 (NEUR2) or neuralized-like protein 3, is a mammalian homolog of the Drosophila neuralized (D-neu) protein. It functions as an E3 ubiquitin-protein ligase that interacts with and ubiquitinates Delta. Thus, it plays a role in the endocytic pathways for Notch signaling through working cooperatively with another E3 ligase, Mind bomb-1 (Mib1), in Delta endocytosis to hepatocyte growth factor-regulated tyrosine kinase substrate (Hrs)-positive vesicles. NEURL1B contains two neuralized homology regions (NHRs) responsible for Neural-ligand interactions and a modified C3HC5-type RING-HC finger required for ubiquitin ligase activity. The C3HC5-type RING-HC finger is distinguished from typical C3HC4-type RING-HC finger due to the existence of the additional cysteine residue in the middle portion of the RING finger domain.
Statistics
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PSSM-Id: 438440
Aligned: 6 rows
Threshold Bit Score: 126.984
Created: 29-Jul-2013
Updated: 17-Oct-2022
Structure
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Aligned Rows:
 
Zn binding site
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C H C C C CClick to see conserved feature residue pattern help
Evidence:
  • Comment:based on the structures of other RING-HC fingers with bound zinc
  • Comment:modified RING-HC finger (C3HC5-type), extra conserved cysteine is not involved in Zn binding
  • Comment:The C3HC5-type RING finger is distinguished from typical C3HC4 RING-HC finger and C3H2C3 RING-H2 finger due to the existence of the additional cysteine residue in the middle portion of the RING finger domain.
  • Comment:C3HC4-type RING-HC finger consensus motif: C-X2-C-X(9-39)-C-X(1-3)-H-X(2-3)-C-X2-C-X(4-48)-C-X2-C, where X is any amino acid and the number of X residues varies in different fingers
  • Comment:A RING finger typically binds two zinc atoms, with its Cys and/or His side chains in a unique "cross-brace" arrangement.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1            #  #           # #   #  #           #  #             
A8MQ27       499 KNGECTVCFDGEVDTVIYTCGHMCLCHSCGLRLKRQaRACCPICRRPIKDVIKIYRP 555 human
XP_002941593 497 KDGECAVCFDNEVETVIYTCGHMCLCSSCGLKLKRQvNACCPICRRVIKDVIKTYRP 553 western clawed frog
XP_005992563 496 KNGECTVCFDSEVDTVIYTCGHMCLCNSCGLKLKKQsNACCPICRRVIKDVIKIYRS 552 coelacanth
XP_007899576 489 KNGECTVCFDSEVETVIYTCGHMCLCYDCGLKLKKQiNACCPICRRVIKDVIKIYRP 545 elephant shark
XP_005157255 504 KSSECTVCFDQEVDTVIYTCGHMCLCNDCGQRLKRQiNACCPICRRPIKDVIKTYRP 560 zebrafish
XP_018107656 496 KDGECAVCFDNEVETVIYTCGHMCLCSSCGLKLKRQvNACCPICRRVIKDVIKTYRP 552 African clawed frog

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