1EWK,2E4U,2E4Z


Conserved Protein Domain Family
PBP1_mGluR

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cd06362: PBP1_mGluR (this model, PSSM-Id:107357 is obsolete and has been replaced by 380585)
Click on image for an interactive view with Cn3D
Ligand binding domain of the metabotropic glutamate receptors (mGluR)
Ligand binding domain of the metabotropic glutamate receptors (mGluR), which are members of the family C of G-protein-coupled receptors that transduce extracellular signals into G-protein activation and ultimately into cellular responses. mGluRs bind to glutamate and function as an excitatory neurotransmitter; they are involved in learning, memory, anxiety, and the perception of pain. Eight subtypes of mGluRs have been cloned so far, and are classified into three groups according to their sequence similarities, transduction mechanisms, and pharmacological profiles. Group I is composed of mGlu1R and mGlu5R that both stimulate PLC hydrolysis. Group II includes mGlu2R and mGlu3R, which inhibit adenylyl cyclase, as do mGlu4R, mGlu6R, mGlu7R, and mGlu8R, which form group III.
Statistics
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PSSM-Id: 107357
Aligned: 31 rows
Threshold Bit Score: 560.709
Created: 18-May-2007
Updated: 17-Jan-2013
Structure
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Program:
Drawing:
Aligned Rows:
 
ligand-bindingdimerization
Conserved site includes 8 residues -Click on image for an interactive view with Cn3D
Feature 1:ligand-binding site [chemical binding site]
Evidence:
  • Structure:1EWK; Rattus norvegicus mGuR subtype I complexed with glutamate, contacts calculated at 3.5 A.
    View structure with Cn3D
  • Structure:2E4U; Rattus norvegicus mGluR subtype II complexed with glutamate, contacts calculated at 3.5 A.
    View structure with Cn3D
  • Structure:2E4Z; Rattus norvegicus mGluR subtype III complexed with 2-morpholin-4-ylethanesulfonic acid, contacts calculated at 3.5 A.
    View structure with Cn3D

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                        #                                                
1EWK_A         11 GDVIIGALFSVHhqppaekvperkCGEIREQYGIQRVEAMFHTLDKINadp-vllPNITLGSEIRDSCwhsSVALEQSIE 89   Norway rat
Q09630         85 GDILIGGVFPVHsksln---gdepCGEIAETRGVHRVEAMLYALDQINsqn-dflRGYKLGALILDSCsnpAYALNQSLD 160  nematode
21627691      226 GDVILGGLMMVHsred-----sitCGPIMPQGGIQALEAMLFTIDRINreq--llPNITLGAHILDDC---DKDSYGLEM 295  fruit fly
XP_780058      34 GDLILGGLFPIHetgp----sglrCSELRETETLHRLEAMAFAIEEINnlt-dilPGVTLGFEIRDTCsdvSMTQIGALK 108  purple urchin
XP_001633378    3 GDILLGGLVPVHsknv-----dlqCGELQERLGIQRLEALLYALDKINaanstllNGITLGLQLYDTCsseTMALDKSLN 77   starlet sea a...
XP_001639690   76 GDVILGGLFNVHsrstt---tengCGSIDLNPGFQYYAAAVFAIDEINknp-nilPGVKLGARIYDTCrsqTIGGDDAME 151  starlet sea a...
XP_001640728   99 GDVIIGGLFPVHlknqk---sensCGPISTQPGFQYLAAMLFALELINnss-tllRNITLGASIYDTCqsqTIGADHAKD 174  starlet sea a...
Q13255         43 GDVIIGALFSVHhqppaekvperkCGEIREQYGIQRVEAMFHTLDKINadp-vllPNITLGSEIRDSCwhsSVALEQSIE 121  human
NP_001038253   52 GDVIIGALFSVHhqpsaervadrkCGDVREQYGIQRVEAMFHTLDRINadq-nllPNITLGCEIRDSCwhsSVALEQSIE 130  zebrafish
NP_989469      39 GDIIIGALFSVHhqptvdkvherkCGEVREQYGIQRVEAMLHTLDRINldp-tllPNITLGCEIRDSCwhsAVALEQSIE 117  chicken
Feature 1                                                    #                    ###             
1EWK_A         90 FIRdslisirdekdglnrclpdgqtlppgrtkkPIAGVIGPGsSSVAIQVQNLLQLFDIPQIAYSATSIDLSDKTlYKYF 169  Norway rat
Q09630        161 FVRdmigsseasdyvcl--dgsdpnlkkqsqkkNVAAVVGGSySSVSVQLANLLRLFRIAQVSPASTNADLSDKNrFEYF 238  nematode
21627691      296 AVRk-----------------------------VISGVVGAAsSVTSIQVANLLRLFRIPQVSYFSTSPELSNKQrFEYF 346  fruit fly
XP_780058     109 FLPsdftrgatcpm--------stnastlleasPIIGVVGTEmSKTTMSAAQLLGLNHVPVVSYYATSDDLSDTIqYPYF 180  purple urchin
XP_001633378   78 FIYsqlks--------------------estssRVVGIIGAAySSVSIQIARLSRLFEIPQISYDSTSFELSDKKrFGFF 137  starlet sea a...
XP_001639690  152 IIKytlldr-------------------tnstpPLAGVIGPFrSDVAVAVANLLGVFNIPQVSFGATTTKLSNKQiYKYF 212  starlet sea a...
XP_001640728  175 IIKesll----------------------tnnkLLKGVVGPLvSDVSIATVQLLRVFGLPQVSFGSTSPDLSNKDlYGSF 232  starlet sea a...
Q13255        122 FIRdslisirdekdginrclpdgqslppgrtkkPIAGVIGPGsSSVAIQVQNLLQLFDIPQIAYSATSIDLSDKTlYKYF 201  human
NP_001038253  131 FIRdslisirddkdgskwcidgtpsnqpppskkPIAGVIGPGsSSVAIQVQNLLQLFNIPQIAYSATSIDLSDKTlFKYF 210  zebrafish
NP_989469     118 FIRdslisseeeegmvr---cvdgssssfhskkPIVGVIGPGsSSVAIQVQNLLQLFNIPQIAYSATSMDLSDKTlFKYF 194  chicken
Feature 1                                           #                                             
1EWK_A        170 LRVVPSDTLQARAMLDIVKrynWTYVSAVHTEGNYGESGMDAFKELAAQEgLCIAHSDKIysna---geksFDRLLRKLR 246  Norway rat
Q09630        239 ARTVPSDDYQAMAMVEIAVkfkWSYVSLVYSADEYGELGADAFKKEARKKgICIALEERIqnkke-sftesINNLVQKLQ 317  nematode
21627691      347 SRTIPSDHYQVKAMVEIVKrmgWSYVSIIYEESNYGIKAFEELEELLARHnICIAIKEKLvkdsgvaediaYDNIVQKLL 426  fruit fly
XP_780058     181 LRVVPPDRLQVQAMLELIRtyeWSYIYLLHSDDSYGTNAFQEIVRVADEIgVCLAETWEIgsql---teedFDNIIMNMQ 257  purple urchin
XP_001633378  138 SRTVPHDNFQAKALVDVLKyfnWTYVSVVYSDDSYGILGVDALRSAATRAgICMASSHKVrssg---hestYLLVVDSIL 214  starlet sea a...
XP_001639690  213 FRTVPPNSFQGRALVDVVRyfkWSYVMTVHSHGDYGEPGMDEVKSAAAKHgVCIAGDYKLppfp---keedFEATIKSLL 289  starlet sea a...
XP_001640728  233 FRTVPPDSFQAEALVDILEhhgWNYIITINSAGNYGENGMSAIIKITEKRdICIAATFTVppls---tdahYERIIREIA 309  starlet sea a...
Q13255        202 LRVVPSDTLQARAMLDIVKrynWTYVSAVHTEGNYGESGMDAFKELAAQEgLCIAHSDKIysna---geksFDRLLRKLR 278  human
NP_001038253  211 LRVVPSDTLQARAMLDIVKhynWTYVSAVHTEGNYGESGMEAFKELAAEEgLCIAHSDKIysna---gekhFDRLLKKLR 287  zebrafish
NP_989469     195 MRVVPSDAQQARAMVDIVKrynWTYVSAVHTEGNYGESGMEAFKDMAAKEgICIAHSYKIysna---geqsFDKLLRKLR 271  chicken
Feature 1                                                         #                               
1EWK_A        247 ERlpk----arVVVCFcegmtVRGLLSAMRRLgvv-----geFSLIGSDGWAdrdev--iegyEVEANGGITIKLqspeV 315  Norway rat
Q09630        318 PEknv---gatVVVLFvgteyIPDILRYTAERmkltsgakkrIIWLASESWDrnndkytagdnRLAAQGAIVLMLasqkV 394  nematode
21627691      427 TKpr-----arGAIIFgsdqeVRQVMRAVRRAnat-----gsFSWIGSDGWSarnlv--sddyEPEVEGTLSVQPqanpV 494  fruit fly
XP_780058     258 MRsq-----akVVILFinvveANSFFAALRRSgav-----gdYQILGSDGWGmsige-ietlnRPAALGSLKTHLfsahV 326  purple urchin
XP_001633378  215 SEpl-----arTVIVFaqvhqIRGLLHAVQVRnaa-----dqLQFVGSDAWGnvvw---lkdlQSVALNTITVSPksvrL 281  starlet sea a...
XP_001639690  290 DLskkhsdtvhVVVMFciqrdNTGLVRAAKKLlne----nnrFIFVASNSWGerhpv--tnnnEEGGEGALTLNFidgnV 363  starlet sea a...
XP_001640728  310 QArfd---avnIIVVFttqtdSAGLLSAAARLga------trFTWLGSNGWSnrmtv--tignEMVANGSITVNHmdgqV 378  starlet sea a...
Q13255        279 ERlpk----arVVVCFcegmtVRGLLSAMRRLgvv-----geFSLIGSDGWAdrdev--iegyEVEANGGITIKLqspeV 347  human
NP_001038253  288 ERlpk----arVVVCFcegmtVRSLLMAMRRRgvs-----geFQLIGSDGWAdrdev--vegyEQEADGGITMKLqteeV 356  zebrafish
NP_989469     272 SHlpk----arVVACFcegmtVRGLLMAMRRLgla-----geFLLLGSDGWAdrydv--tdgyQREAVGGITIKLqspdV 340  chicken
Feature 1                                                                          #              
1EWK_A        316 RSFDDYFLKlrldt--ntrnPWFPEFWQhrfqcrlpghllenpnfk--kvctgnesleenyvqdsKMGFVINAIYAMAHG 391  Norway rat
Q09630        395 PSFEEYFMSlhpgteafernKWLRELWQvkykcefdtppgstas-----rcedikqstegfnaddKVQFVIDAVYAIAHG 469  nematode
21627691      495 RGFEEYFLSltven--nqrnPWFVEFWEdhfqcrypgststpynnytkqcttkerlsrqntdfedQLQFVSDAVMAFAYA 572  fruit fly
XP_780058     327 QNFEDHFLGltptk--shdnPWFQEYWNssrncsfikhga-------------sclsstgfsagsAVSLVLDAVSTLALG 391  purple urchin
XP_001633378  282 KGFEEYFTSlspin--nsrnPWFQEYWEhhfncslnetlgkyptk----cndslklslgnsdidmRIASAIDAVYAFAHA 355  starlet sea a...
XP_001639690  364 KRFKDHLLSltpl---ddnsTWFHEFWQismncklsfakwqfntt----kecrlnemlprdfgiaPVRVSINAVYAAAHA 436  starlet sea a...
XP_001640728  379 AGFEEFFSSmnpin--nqniPWIDEFWEnwfkcdlpggkptfy-------knctedlvlpkmevaPVRVVINAVYAFAHA 449  starlet sea a...
Q13255        348 RSFDDYFLKlrldt--ntrnPWFPEFWQhrfqcrlpghllenpnfk--rictgnesleenyvqdsKMGFVINAIYAMAHG 423  human
NP_001038253  357 QSFNDYFLKlrldt--nkrnPWFAEFWQyrfqcripghpqenhnyq--kictgneslkdnyvqdsKMGFVINAIYAMAHG 432  zebrafish
NP_989469     341 KWFDDYYLElrpet--nhrnPWFQEFWQhrfqcrlegfpqenpkyn--ktctsqmtlrtqhvqdsKMGFVINAIYSMAYG 416  chicken
Feature 1                                                                                         
1EWK_A        392 LQNMHHALCpghvglcdamkpidgrk------------------------------lldflikssfvgvsgeEVWFDEKG 441  Norway rat
Q09630        470 LQSMKQAICpddaienhwisryskqpeichamqnidgsdfyqnyllkvnftgktisifssfrlspfsdivgkRFRFSPQG 549  nematode
21627691      573 LRDMHRDLCgggpslceamkptkgad------------------------------llkylrkvefeglsgdEFRFDGNG 622  fruit fly
XP_780058     392 LSEMHKDLChgqsgicpamtpfdsa-------------------------------llfdymtnlsfegqsgFVTFDSGG 440  purple urchin
XP_001633378  356 LEAMHADLCrytvgvcpamenisgse------------------------------llgyirnasfvgatgeKVHFDANG 405  starlet sea a...
XP_001639690  437 LHNMYTNLCpkqsgmcdefrnlkren-----------------------------ylkflrnvtfpdaasnvTVRFNRNG 487  starlet sea a...
XP_001640728  450 LDDMQRALCpgkvglceamiadssgkt----------------------------lidflrnvtfpdasygwPVRFNKNQ 501  starlet sea a...
Q13255        424 LQNMHHALCpghvglcdamkpidgsk------------------------------lldflikssfigvsgeEVWFDEKG 473  human
NP_001038253  433 LHDMHREMCpehsglceamdpidgsk------------------------------lldyllktsfsgvsgeEIYFDVNG 482  zebrafish
NP_989469     417 LHNMQLSLCpgyvglcdamkpidgrk------------------------------lleslmktnftgvsgdMILFDENG 466  chicken
Feature 1                                                        
1EWK_A        442 DAPGRYDIMNLqytea-----------nrydYVHVGTWhegVLNIDD 477  Norway rat
Q09630        550 DGPASYTILTYkpksmdkkrrmtddesspsdYVEIGHWs--ENNLTI 594  nematode
21627691      623 DGPARYNIIHFkqsqa-----------gqyhWVKVGEYtegELRLNM 658  fruit fly
XP_780058     441 DAIGRYVIDNIqven------------inyeLVKVGLWs--AIQENL 473  purple urchin
XP_001633378  406 DVEGIYDVMRFekss------------gtyrNVIIGTWk-dKLRMRN 439  starlet sea anemone
XP_001639690  488 EVDGNYSIVNFrkvd------------gkytYLKVGSWg-gVLKPDD 521  starlet sea anemone
XP_001640728  502 EMDGNYSIMNFqyqn------------gkwiYENVGSWswgDESDNV 536  starlet sea anemone
Q13255        474 DAPGRYDIMNLqytea-----------nrydYVHVGTWhegVLNIDD 509  human
NP_001038253  483 DSPGRYDIMNLqyvee----------igrfdYINVGSWhegLLSISD 519  zebrafish
NP_989469     467 DSPGRYEIMNFkkmgk-----------dyfdYINVGSWdngELKMDD 502  chicken

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