Conserved Protein Domain Family
LIM1_ZASP_Cypher

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cd09454: LIM1_ZASP_Cypher 
The first LIM domain of ZASP/Cypher family
The first LIM domain of ZASP/Cypher family: ZASP was identified in human heart and skeletal muscle and Cypher is a mice ortholog of ZASP. ZASP/Cyppher contains three LIM domains at the C-terminus and a PDZ domain at N-terminus. ZASP/Cypher is required for maintenance of Z-line structure during muscle contraction, but not required for Z-line assembly. In heart, Cypher/ZASP plays a structural role through its interaction with cytoskeletal Z-line proteins. In addition, there is increasing evidence that Cypher/ZASP also performs signaling functions. Studies reveal that Cypher/ZASP interacts with and directs PKC to the Z-line, where PKC phosphorylates downstream signaling targets. LIM domains are 50-60 amino acids in size and share two characteristic zinc finger motifs. The two zinc fingers contain eight conserved residues, mostly cysteines and histidines, which coordinately bond to two zinc atoms. LIM domains function as adaptors or scaffolds to support the assembly of multimeric protein complexes.
Statistics
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PSSM-Id: 188838
Aligned: 4 rows
Threshold Bit Score: 105.061
Created: 22-Jul-2010
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Zn binding site
Feature 1:Zn binding site [ion binding site]
Evidence:
  • Comment:The two zinc fingers contain eight conserved residues, mostly cysteines and histidines, which coordinately bond to two zinc atoms. The Zn binding residues of LIM domain are highly conserved.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1        #  #                #  #  #  #                 #  # 
AAY27884     467 CATCNNIIRGPFLVALGRSWHPEEFNCHYCHTSLADvsFVEEQNNVYCENCY 518 zebrafish
NP_001165081 556 CGHCNNVIRGPFLVAMGRSWHPEEFTCAYCKTSLADvcFVEEQNNVYCERCY 607 human
XP_002190242 440 CGHCNSIIRGPFLVAMGRSWHPEEFNCAYCKTSLADmcFVEEQNSVYCERCY 491 zebra finch
CAG12341     175 LLVCCRATRGPFLVALGRSWHPEEFTCHYCHASLADvsFVEEQNNVYCENCY 226 spotted green pufferfish

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