3A7Q,2E26


Conserved Protein Domain Family
Reelin_repeat_5_subrepeat_2

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cd10049: Reelin_repeat_5_subrepeat_2 
Click on image for an interactive view with Cn3D
C-terminal subrepeat of tandem repeat unit 5 of reelin and related proteins
Reelin is an extracellular glycoprotein involved in neuronal development, specifically in the brain cortex. It contains 8 tandemly repeated units, each of which is composed of two highly similar subrepeats and a central EGF domain. This model characterizes the C-terminal subrepeat, which directly contacts the N-terminal subrepeat and the EGF domain in a compact arrangement. Consecutive reelin repeat units are packed together to form an overall rod-like molecular structure. Reelin repeats 5 and 6 are reported to interact with neuronal receptors, the apolipoprotein E receptor 2 (ApoER2) and the very-low-density lipoprotein receptor (VLDLR), triggering a signaling cascade upon binding and subsequent tyrosine phosphorylation of the cytoplasmic disabled-1 (Dab1).
Statistics
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PSSM-Id: 197357
Aligned: 6 rows
Threshold Bit Score: 268.688
Created: 25-Mar-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
reelin repeatreelinEGF domain
Conserved site includes 11 residues -Click on image for an interactive view with Cn3D
Feature 1:reelin repeat interface
Evidence:
  • Structure:2E26: The C-terminal subrepeat of the mouse reelin repeat tightly packs against the N-terminal subrepeat of the next reelin repeat unit, contacts at 4 A
    View structure with Cn3D

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1            # #                                                       ## # #             
3A7Q_A        221 NPDFLKDDFEGQLe--sDRFLLMSGGKPSRKCGILSSGNNLFFNEDGLRMLVTRDLDLShARFVQFFMRLGCGKgvPDPR 298  house mouse
2E26_A        221 NPDFLKDDFEGQLe--sDRFLLMSGGKPSRKCGILSSGNNLFFNEDGLRMLVTRDLDLShARFVQFFMRLGCGKgvPDPR 298  house mouse
O93574       1914 NSDSLKDDFEGQLe--sDRFLLVSGGKPSRKCGIMSGGNNLFFNEEGLRMLMTRDLDLSqARFVQFFMRLGCGKgvPDPR 1991 chicken
AAN76666      624 NPDFLKEDFEGSVle-lEHFRLMSGGKPSRKCGITTSGNHLFFSEDGLRMLETVDLDLSnTRFIQFFLRLGCGKaaPDPR 702  zebrafish
XP_001182791  452 NPFFLKESFQNSGsldrKKFSQWSGAEVTQKCGTLITGKSLHFTGSGRRMLTTVDMDLTmASIISFYIRLGCSQrpPSQL 531  purple urchin
NP_001131084 2169 NPDFLKDDFEGQLe--sDRFLLVSGGKTSRKCGILSSGNNLFFNEEGLRMLVTRDLDLSlARFVQFFMRLGCGKavPDPR 2246 western clawe...
Feature 1                                         # ###                                #  
3A7Q_A        299 SQPVLLQYSLNGGLSWSLLQEFLFSNSSNVGRYIALEMPLKARSGSTRLRWWQPSENGHFYSPWVIDQILIG 370  house mouse
2E26_A        299 SQPVLLQYSLNGGLSWSLLQEFLFSNSSNVGRYIALEMPLKARSGSTRLRWWQPSENGHFYSPWVIDQILIG 370  house mouse
O93574       1992 SQLSXLQYSLNGGLTWSLLQEFLFSNSSNVGRYIALEIPMKARSSSTRLRWWQPSENGHFYSPWVIDQILIG 2063 chicken
AAN76666      703 SQPVLLQFSVDAGLTWALLQEFLYSNSSNQAHLVALEIPLRARTPATRLRWWQPSESGHFHSPWVIDKLVVG 774  zebrafish
XP_001182791  532 NLPIILQSSSNGGITWDTIQEMTFDPQSNDPMYVALQLPAGSHSNATRIRWWQPSRDGAYMDEWAIDQQLYF 603  purple urchin
NP_001131084 2247 SQPVLLQFSLDGGLSWSVLQEFHFSNSSNVGRYVALEIPLKARSPSTRLRWWQPSENGHFYSPWVIDQILIG 2318 western clawed frog

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