1ZXT,2FHT,1EIG,1F9P,1B2T,1O7Y


Conserved Protein Domain Family
SCY

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smart00199: SCY 
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Intercrine alpha family (small cytokine C-X-C) (chemokine CXC).
Family of cytokines involved in cell-specific chemotaxis, mediation of cell growth, and the inflammatory response.
Statistics
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PSSM-Id: 197570
Aligned: 56 rows
Threshold Bit Score: 39.9212
Threshold Setting Gi: 1628563
Created: 13-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1ZXT_A         8 PNSC-CYGFQq--HPPPVQILK---EWY--P--TSPACPKP-GVILLT-KRGRQICADPS--KNWVRQLMQRL 66  KSHV
Q68399        47 DRRCrCNNQ----ILLNTLPVGt-eLLK--PiaASESCNRQ-EVLAILkDKGTK-CLNPN--AQAVRRHINRL 108 Human cytomegalovirus
Q90825        28 SYSSyCYKNMfiqKEINTSLIR----RY--Re-TPPNCSRRaIIVELK--KGKKFCVDPA--EGWFQQYLQGK 89  chicken
NP_001007730  41 DLSCvCVKTSs--SRIHLKRIT---SLE--VikAGPHCAVP-QLIATL-KNGSKICLDRQ--VPLYKKIIKKL 102 Norway rat
P50228        50 ELRCvCLTVTp--K-INPKLIA---NLEviP--AGPQCPTV-EVIAKL-KNQKEVCLDPE--APVIKKIIQKI 110 house mouse
AAP36145      46 ELRCvCLQTT---QGVHPKMIS---NLQ--VfaIGPQCSKV-EVVASL-KNGKEICLDPE--APFLKKVIQKI 106 synthetic construct
DAA28540      55 DLQCvCLKTTs---GINPRHIS---SLE--VigAGLHCPSP-QLIATL-KTGRKICLDQQ--NPLYKKIIKRL 115 cattle
EAX05764      27 kgRCsCISTNq--GTIHLQSLK---DLK--QfaPSPSCEKI-EIIATL-KNGVQTCLNPD--SADVKELIKKW 88  human
AAB17374      34 RGRClCIGPGv--KAVKVADIEkasIMY--P---SNNCDKI-EVIITL-KEIRKRCLXPNraSKQARLIIKKA 97  human
1O7Y_A         6 TVRCtCISISn--QPVNPRSLEk-lEII--P--ASQFCPRV-EIIATMkKKGEKRCLNPE--SKAIKNLLKAV 68  synthetic construct
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