2I3S,1NR0,3RFH,3F3F,1PI6,3EWE,2HES,3IZB,3JRO,3JRO,3IZA,3IZA,3FM0,1VYH,2CNX,3IZ6,2HES,3C99


Conserved Protein Domain Family
WD40

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smart00320: WD40 
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WD40 repeats
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Statistics
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PSSM-Id: 197651
View PSSM: smart00320
Aligned: 1783 rows
Threshold Bit Score: 27.6618
Threshold Setting Gi: 297822727
Created: 12-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2I3S_A          1 MQIVQIEQA----PKDYISDIKIIPSK----SLLLITSWDGSLTVYK 39   baker's yeast
Q19433         93 DSEPIMFSGh---KKAVNCIEFSSDGL----LFATGGKDGVIVLWDI 132  Caenorhabditis elegans
O60097        221 EGYPVTSLKk---HTAPVSCLALHGSE----KKVLSGSWDKMVYYWD 260  Schizosaccharomyces pombe 972h-
XP_002714110  210 DNQPLHIFDk--lHTSPLTQIRLNPVY----KAVVSSDKSGMIEYWT 250  rabbit
NP_587769     168 DGEVLYTVKk---HTAPVHCLRYLSTL----DCFLSIDIGGMVEYWS 207  Schizosaccharomyces pombe 972h-
XP_782045     432 FQSTAKTGK----HTDPVWQVAWQKDDldnnLNFFSVSSDGRVVAWT 474  purple urchin
XP_001118393  177 DNLIYYALGg---HKDAIVACFFESNS----LDLYSLSQDGVLCMWQ 216  rhesus monkey
EGA77865      299 EGSIAHYFKgrngHTQIVNILRLNGQE----DRFLSGSWDKRLLEWD 341  Saccharomyces cerevisiae Vin13
NP_495051     355 DPEPMFTIDe---HTGQVRTAQFCSFRdg-iLATGGGINDGTVKLWD 397  nematode
EDZ73502      180 KNLAATTFNg---HRDYVMGAFFSHDQ----EKIYTVSKDGAVFVWE 219  Saccharomyces cerevisiae AWRI1631
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