2R4V,2PER


Conserved Protein Domain Family
GST_C_CLIC2

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cd10298: GST_C_CLIC2 
Click on image for an interactive view with Cn3D
C-terminal, alpha helical domain of Chloride Intracellular Channel 2
Glutathione S-transferase (GST) C-terminal domain family, Chloride Intracellular Channel (CLIC) 2 subfamily; CLICs are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division, and apoptosis. They can exist in both water-soluble and membrane-bound states and are found in various vesicles and membranes, and they may play roles in the maintenance of these intracellular membranes. The membrane localization domain is present in the N-terminal part of the protein. Structures of soluble CLICs reveal that they adopt a fold similar to GSTs, containing an N-terminal domain with a thioredoxin fold and a C-terminal alpha helical domain. CLIC2 contains an intramolecular disulfide bond and exists as a monomer regardless of redox conditions, in contrast to CLIC1 which forms a dimer under oxidizing conditions. It is expressed in most tissues except the brain, and is highly expressed in the lung, spleen, and in cardiac and skeletal muscles. CLIC2 interacts with ryanodine receptors (cardiac RyR2 and skeletal RyR1) and modulates their activity, suggesting that CLIC2 may function in the regulation of calcium release and signaling in cardiac and skeletal muscles.
Statistics
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PSSM-Id: 198331
Aligned: 6 rows
Threshold Bit Score: 248.641
Created: 4-Apr-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
N-terminal
Conserved site includes 21 residues -Click on image for an interactive view with Cn3D
Feature 1:N-terminal domain interface [polypeptide binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1            #                                             #                  #   ###  ##
2R4V_A       106 YKESFDVGCNLFAKFSAYIKNtqkeaNKNFEKSLLKEFKRLDDYLNTPLLDEIDpdsaeePPVSRRLFLDGDQLTLADCS 185 human
2PER_A       126 YKESFDVGCNLFAKFSAYIKNtqkeaNKNFEKSLLKEFKRLDDYLNTPLLDEIDpdsaeePPVSRRLFLDGDQLTLADCS 205 human
NP_001026285 103 YKESFDVGSDIFAKFSAYIKNsrkeaNSNLEKALLREFQRLDQYLTTPLPEEIDqdsvedITISKRKFLDGDHLTLADCN 182 chicken
AAH76239     105 YKESFDVGAGIFAKFSAFIKNsp--nNAFHEKALLREFKRLDDYLNTPLQDELDq----nISVSKRKFLDGNRLTLADCN 178 zebrafish
ACO10553     105 NKESFDVGADIFAKFSAFIKNnp-anTTFQEKALLREFKRLDLYLNSPVPEEIDhnsrenITLSKRKFLDGNHLTLADCN 183 Caligus rogercr...
CAG08362      56 KPAELKDLSPGTNPPFLLYNNsp--nNAVQEKNLLREFKRLDDYLNSPLPEEIDhtsdetITVSKRKFLDGDRLTLADCN 133 spotted green p...
Feature 1          #   #                             #### ####   ##  #      
2R4V_A       186 LLPKLNIIKVAAKKYRDFDIPAEFSGVWRYLHNAYAREEFTHTCPEDKEIENTYANVAK 244 human
2PER_A       206 LLPKLNIIKVAAKKYRDFDIPAEFSGVWRYLHNAYAREEFTHTCPEDKEIENTYANVAK 264 human
NP_001026285 183 LLPKLHIIKIAAKKYRDFEIPADMTGVWRYLNNAYACDEFSHTCPADEEIVHTYASVAR 241 chicken
AAH76239     179 LLPKLHVIKVAARKYCNFDIPTQFTGVWRYLQSAYEREEFSQTCPADIEIEKAYLSVVK 237 zebrafish
ACO10553     184 LLPKLHVIKIAAKKYCDFDIPVQFTGVWRYLNNAYEREEFRQTCPANIEIEKAYLDVTN 242 Caligus rogercresseyi
CAG08362     134 LLPKLQVIRVAAKKYCNFEIPADFTGVWRYLENADEREEFKQTCPADVEIEKAYFGVAN 192 spotted green pufferfish

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