2FGH,1H1V,3FG6,1NPH


Conserved Protein Domain Family
gelsolin_S5_like

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cd11288: gelsolin_S5_like 
Click on image for an interactive view with Cn3D
Gelsolin sub-domain 5-like domain found in gelsolin, severin, villin, and related proteins.
Gelsolin repeats occur in gelsolin, severin, villin, advillin, villidin, supervillin, flightless, quail, fragmin, and other proteins, usually in several copies. They co-occur with villin headpiece domains, leucine-rich repeats, and several other domains. These gelsolin-related actin binding proteins (GRABPs) play regulatory roles in the assembly and disassembly of actin filaments; they are involved in F-actin capping, uncapping, severing, or the nucleation of actin filaments. Severing of actin filaments is Ca2+ dependent. Villins are also linked to generating bundles of F-actin with uniform filament polarity, which is most likely mediated by their extra villin headpiece domain. Many family members have also adopted functions in the nucleus, including the regulation of transcription. Supervillin, gelsolin, and flightless I are involved in intracellular signaling via nuclear hormone receptors. The gelsolin-like domain is distantly related to the actin depolymerizing domains found in cofilin and similar proteins.
Statistics
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PSSM-Id: 200444
Aligned: 40 rows
Threshold Bit Score: 90.7537
Created: 27-Aug-2009
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
putative type 2putative
Conserved site includes 3 residues -Click on image for an interactive view with Cn3D
Feature 1: putative type 2 Ca binding site [ion binding site], 3 residue positions
Conserved feature residue pattern:N D EClick to see conserved feature residue pattern help
Evidence:
  • Comment:Activated actin-bound gelsolin has eight Ca2+-binding sites: six type 2 sites, one in each sub-domain, and two type 1 sites, associated with the first and the fourth sub-domain.
  • Comment:not all members of this subfamily may bind calcium at this site
  • Structure:1H1V: the fifth sub-domain of rabbit gelsolin binds Ca2+ in a type 2 binding site, contacts at 4A
    View structure with Cn3D

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                        ##                              #                
2FGH_A        510 ASTRLFQVRASSs-gATRAVEIIPKaGALNSNDAFVLKTPS---------AAYLWVGAGASEAEKTGAQELLRVLr---- 575  horse
1H1V_G        123 ASTRLFQVRANSa-gATRAVEVLPKaGALNSNDAFVLKTPS---------AAYLWVGTGASEAEKTGAQELLRVLr---- 188  human
NP_001025806 1048 PQPSLYHIRTNGgalCTRCIQINTDsGLLNSEFCFILKVPFestd--nqgIVYTWVGRAADPDEAKLAEDIMNNMfd--- 1122 chicken
ABA43703       66 DLTEFFYFRSNGsplCTRCVQIVPDaSILNSYFCFILKVPFdqeg--nsgIVYVWIGEKADDDEAKLAEEIASEMyng-- 141  Tanystylum or...
NP_001086319 1053 LQPSLYHVRTNGsalCTRCIQVSTDcSLLNSEFCYILKVPFesid--nqgIVYTWVGRAADPDEAKLSEDIMNHMfd--- 1127 African clawe...
ABA43701       66 APAKLYQLRINDslvCARCVEVDAKaTSLNSAFCHILNVPFdrsa--sngIIYLWLGSKAPEDDTLLANEIAKDMtk--- 140  Thulinius ste...
NP_002009    1052 QQPSLYQIRTNGsalCTRCIQINTDsSLLNSEFCFILKVPFesed--nqgIVYAWVGRASDPDEAKLAEDILNTMfd--- 1126 human
Q24020       1037 SPVEFFHLRSNGgalTTRLIQINPDaVHLNSTFCYILHVPFeteddsqsgIVYVWIGSKACNEEAKLVQDIAEQMfns-- 1114 fruit fly
P36418        590 SLQGLYHVRGTEp-iNIHSIQVEKAiSSLDSNDSFILVNFKn-------tISYIWVGKYSDEKEAALQISSNVFTg---- 657  Dictyostelium...
NP_003165    1453 SEWRLYCVRGEVp-vEGNLLEVACHcSSLRSRTSMVVLNVNk-------aLIYLWHGCKAQAHTKEVGRTAANKIkeqcp 1524 human
Feature 1                                           
2FGH_A        576 ----------AQPVQVAEGSEPDSFWEALGGKAT 599  horse
1H1V_G        189 ----------AQPVQVAEGSEPDGFWEALGGKAA 212  human
NP_001025806 1123 --------dsYSKQVINEGEEPENFFWVGIGSQK 1148 chicken
ABA43703      142 --------dkFGLQVINEGEEPENFFWLGLGGQK 167  Tanystylum orbiculare
NP_001086319 1128 --------dtYSKQVINEGEEPENFFWVGIGAQK 1153 African clawed frog
ABA43701      141 --------yhYTMQIIKEGEEPENFFWTGINGKR 166  Thulinius stephaniae
NP_002009    1127 --------tsYSKQVINEGEEPENFFWVGIGAQK 1152 human
Q24020       1115 --------pwVSLQILNEGDEPENFFWVALGGRK 1140 fruit fly
P36418        658 ----------YNFQLIDEGDETSEFWESLETNSS 681  Dictyostelium discoideum AX4
NP_003165    1525 leaglhssskVTIHECDEGSEPLGFWDALGRRDR 1558 human

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