1G29,1B0U,1E3M,1E69,1F3O,1G6H,1JI0,1JJ7,1L7V,1MT0,1OXX,1VPL,1W1W,1XMI,1YQT,1YQT,1Z47,2D2F


Conserved Protein Domain Family
ABC_ATPase

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cd00267: ABC_ATPase 
Click on image for an interactive view with Cn3D
ATP-binding cassette transporter nucleotide-binding domain
ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Statistics
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PSSM-Id: 213179
Aligned: 185 rows
Threshold Bit Score: 36.8391
Created: 1-Nov-2000
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
  next features
Conserved site includes 9 residues -Click on image for an interactive view with Cn3D
Feature 1:ATP binding site [chemical binding site]
Evidence:
  • Comment:Walker A, Walker B, Q-loop, D-loop, and H-loop form the nucleotide binding site
  • Structure:1JJ7_A; ABC ATPase domain of TAP1 binds ATP and Mg2+
    View structure with Cn3D

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                              ## ###                                  
1G29_1       5 RLVDVWKVfgev---tavREMSLEVKdg---eFMILLGPSGCGKTTTLRMIagle------------------------- 53   Thermococcus lit...
1JJ7_A      16 QFQDVSFAypnrpdvlvlQGLTFTLRpg---eVTALVGPNGSGKSTVAALLqnly------------------------- 67   human
CAA91229   234 ELNKTQIKqnr----lllKQNKLKIYg----kTTLITGSNGVGKTSLFKAMtkmi------------------------- 280  Lactobacillus he...
Q9K974       4 ELSIKQFAi--------iEQLTVSFDk----gLTVLTGETGAGKSIIIDAIglllggrgsaeyv--------rygekrae 63   Bacillus halodurans
AAG27593     5 EICLEGFKsy-------aTRTVVSGFdp---hFNAITGLNGSGKSNILDSIcfvlgitnlqqvraanlqelvykqgqagi 74   thale cress
NP_683234    5 SLHLRHFRn--------ySEQSVTFAa----pKTILVGDNAQGKSNLLEAVewlatlqshrthr-------drdliqqgh 65   Thermosynechococ...
NP_775360   85 HIVNRNFKsy-------aGEQILGPFhk---rFSCIIGPNGSGKSNVIDSMlfvfgyraqkirskklsvlihssdghpdi 154  zebrafish
NP_781259    5 KLTMCAFGpy-------aDVQIIDFTeldnrnIFLINGPTGAGKTTIFDAIsyalfgeasntnkdr---dglrsdfasqe 74   Clostridium teta...
CAG07476     7 RITMKNFLty-------dYTEVYPGPn-----LNMIVGANGTGKSSIVCAIclglagktavlgrgd----kvglyvkrgc 70   Tetraodon nigrov...
AAH90630    56 SIQLRNFMch------smLGPFKFGSn-----VNFVVGNNGSGKSAVLTALivglggkavatnrgs----slkgfvkagq 120  house mouse
Feature 1                                                                                     #
1G29_1      54 epsrGQIYIgdklvadpek---------------------------------------------gifvppkdrdIAMVFQ 88   Thermococcus lit...
1JJ7_A      68 qptgGQLLLdgkplpqy-------------------------------------------------ehrylhrqVAAVGQ 98   human
CAA91229   281 -pykGNFTYldneiski-------------------------------------------------kyrkylsqIAQFFQ 310  Lactobacillus he...
Q9K974      64 ieglFILEPkhpafakaealgiqaddgmivlrrdvtnqgk---sicringklvtlgilreigqslvdihgqhehQTLLHK 140  Bacillus halodurans
AAG27593    75 tkatVSVTFdnserhrsplgyeehpeitvtrqvvvggr-------nkylingklaqpsqvqnlfhsvqlnvnnpHFLIMQ 147  thale cress
NP_683234   66 esaqIEATLerqgvpldlavslrpssgrv--------------------------lrvngctvkrtadflgqlnAVEFSC 119  Thermosynechococ...
NP_775360  155 qsctVEVHFqkiidkegddydvipdssfyvartagkdns------sayyintkkatfkdvgtllrshgidldhnRFLILQ 228  zebrafish
NP_781259   75 tityVDLEFslrdkkykvtrypqqprkksrgegftyknseaflilsegntvsgvtlveekineilginknqfrqIVMLPQ 154  Clostridium teta...
CAG07476    71 nkgsVEIELykhggnvvimreihvennqslwmi-----------------ngkqrnqkaveeevrslriqvsnlCQFLPQ 133  Tetraodon nigrov...
AAH90630   121 nsadISITLrnrgddafranvygdsivvqqhisvdgsrsy---klksekgtvvstrkeeliaildhfniqvdnpVSVLTQ 197  house mouse
Feature 1                                                                                      
1G29_1      89 syalyphmtvydniafplklrkvprq------------------------------------------------------ 114  Thermococcus lit...
1JJ7_A      99 epqvfgrslqeniaygltqkptmeeita---------------------------------------------------- 126  human
CAA91229   311 kasdqfltvtvkdeielskkdrnnf------------------------------------------------------- 335  Lactobacillus he...
Q9K974     141 eqhlslldhfagppletvldeykelykqylalerqlaqltenekemaqktdlfqyqlkeieaanlepgedkrleaerlkl 220  Bacillus halodurans
AAG27593   148 gritkvlnmkppeilsmleelleqgcyenkkeaalktlekkqtkvdeinklldheilpaleklrkeksqymqwangnael 227  thale cress
NP_683234  120 ldlelvrgtpairrnwldrillqleplysqllqtyqkalrqrnallkqagsqgwdealwqawnqqlvingtriirrrqrl 199  Thermosynechococ...
NP_775360  229 geveqiammkpkgqtehdegmleylediigscrlkepinilcrrvealneqrgeklnrvkmvekeksalegeknkavdfl 308  zebrafish
NP_781259  155 gefrklleadssereiifrkifgtehfekfqkvlddkrkeiykdiakvnteritnvkrvdvtnneelskiidkenlnfke 234  Clostridium teta...
CAG07476   134 ekvgefakmsktelleateksvgppemfeyhcelknfrtkerelenivkekknylekakqrheknkhdvnryyekkrhld 213  Tetraodon nigrov...
AAH90630   198 emskqflqsknegdkykffmkatqleqmkedysyimetkertkeqinqgeerltelkrqclekeerfqniaglstmktnl 277  house mouse
Feature 1                                                                                      
1G29_1         --------------------------------------------------------------------------------      Thermococcus lit...
1JJ7_A         --------------------------------------------------------------------------------      human
CAA91229       --------------------------------------------------------------------------------      Lactobacillus he...
Q9K974     221 anaeklfksvhdaynnlygegrglewinnalthiedassydpelgklqqhvqeqyylleeamftlrd------------- 287  Bacillus halodurans
AAG27593   228 drlrrfciafeyvqaekirdnavlgvgvgemkaklgkidaetektqeeiqefekqikaltqakeasmggevktlsekvds 307  thale cress
NP_683234  200 i------------------------------------------------------------------------------- 200  Thermosynechococ...
NP_775360  309 nlendifkkrnllchfyvhdlqsrvsvkeaekqqiqedtkdlsdkssqlteemksknedlkavekkltkltkyiesqkek 388  zebrafish
NP_781259  235 iilgieeiiendeiqeqnlskkieeingeeikiqneivlleevnkkikekeeyekkykelifqkeeyenkkdklyqgrka 314  Clostridium teta...
CAG07476   214 miellekkkpwveyettrkeiesvkkereeakrnlsalrhsqapmvrkikeldeqlqpiedqvkaktaaikdvtlkckqt 293  Tetraodon nigrov...
AAH90630   278 eylkhemawavvneiekqlnairdnikigeeraakldrkmeeqqvrlndaekkykdiqdklekiseetnarapecmalkt 357  house mouse
Feature 1                                                                                      
1G29_1         --------------------------------------------------------------------------------      Thermococcus lit...
1JJ7_A         --------------------------------------------------------------------------------      human
CAA91229       --------------------------------------------------------------------------------      Lactobacillus he...
Q9K974         --------------------------------------------------------------------------------      Bacillus halodurans
AAG27593   308 laqemtressklnnkedtllgekenvekivhsiedlkksvkeraaavkkseegaadlkqrfqelsttleecekehqgvla 387  thale cress
NP_683234      --------------------------------------------------------------------------------      Thermosynechococ...
NP_775360  389 ftqldlqdvevreklkhtksktkklqkqlqkdqekleevrgvpassekiiteasaqkeelekkklleeqklaevmeslke 468  zebrafish
NP_781259  315 levtmlennfkekenyfqlkekeyieveqrvnlyrkkveesikklkeeeskeeerketsnkltilksfqnkvrdyeekkn 394  Clostridium teta...
CAG07476   294 qdqldrkqkeiedinqafrlkqteeadhqkrivntrrliadlkaelakvqdqpdvvprinevnvelrrnqverakmeeer 373  Tetraodon nigrov...
AAH90630   358 dviartrafndaevlynrslneykalkkdgeqlckrieelkkstdqsleperlerqkricwlkekvkalqdqehtvnqea 437  house mouse
Feature 1                                                                                      
1G29_1         --------------------------------------------------------------------------------      Thermococcus lit...
1JJ7_A         --------------------------------------------------------------------------------      human
CAA91229       --------------------------------------------------------------------------------      Lactobacillus he...
Q9K974         --------------------------------------------------------------------------------      Bacillus halodurans
AAG27593   388 gkssgdeekcledqlrdakiavgtagtelkqlktkiehcekelkerksqlmskreeaievenelgarkndvehvkkales 467  thale cress
NP_683234      --------------------------------------------------------------------------------      Thermosynechococ...
NP_775360  469 etkglqddkekkekellelsksvnetrsrmdvaqseldiylsqhntainqlnqaksalqetvdtlrerraaikdlqvkip 548  zebrafish
NP_781259  395 rieqikgelekkqkeysslgskikndrtklnnlnkefvelqkcevekekilskveekevicndmrdfykyynsylinikk 474  Clostridium teta...
CAG07476   374 sdlrrekdntfaqgrslekklsdmnnlmnvkeeklrgrhrdthaalqwlrqnrnrfngnvyepmllvinvkdhrfakyve 453  Tetraodon nigrov...
AAH90630   438 eqfeqaiekdkqehgrvrkedievrhalnynqrqlkelkdsktdrlkrfgphvpalleaiddayrrrqfthkpigplgac 517  house mouse
Feature 1                                                                                      
1G29_1         --------------------------------------------------------------------------------      Thermococcus lit...
1JJ7_A         --------------------------------------------------------------------------------      human
CAA91229       --------------------------------------------------------------------------------      Lactobacillus he...
Q9K974         --------------------------------------------------------------------------------      Bacillus halodurans
AAG27593   468 ipynegqmealekdrgaelevvqrledkvrglsaqlanfqftysdpvrnfdrskvkgvvaklikvkdrssmtalevtagg 547  thale cress
NP_683234      --------------------------------------------------------------------------------      Thermosynechococ...
NP_775360  549 aqeeqlkkdereleqiseqdkqtraqvgdmrqkvaeaksslssnrsrskvldtlmqqkrsgkipgilgrlgdlgaideky 628  zebrafish
NP_781259  475 hgnlkinfdkiekkymetklkyeimednfkkgqagilakdlkdgvkcpvcgskhhpspaemikgvpteeklnqikyef-- 552  Clostridium teta...
CAG07476   454 nhipfqdlrafvfqrkddmetfmsevrdkmnlkvnsisapekscskeeasrniehlrrfgffmylremfdapdevmsy-- 531  Tetraodon nigrov...
AAH90630   518 ihlrdpelalaiesclkgllqaycchnhadervlqslmkkfyppgtsrpqiivsefrdevydvrlraayhpefptvlt-- 595  house mouse
Feature 1                                                                                      
1G29_1         --------------------------------------------------------------------------------      Thermococcus lit...
1JJ7_A         --------------------------------------------------------------------------------      human
CAA91229       --------------------------------------------------------------------------------      Lactobacillus he...
Q9K974         --------------------------------------------------------------------------------      Bacillus halodurans
AAG27593   548 klydvvvdsedtgkqllqngalrrrvtiiplnkiqsyvvqprvqqatarlvgkdnaelalslvgysdel----------- 616  thale cress
NP_683234      --------------------------------------------------------------------------------      Thermosynechococ...
NP_775360  629 dvaissscgsldnilvdtidtaqkcvtflkaqnigvatfigldkmkvwqqsmgsistpeniprlfdmvrvkdesvrpafy 708  zebrafish
NP_781259      --------------------------------------------------------------------------------      Clostridium teta...
CAG07476       --------------------------------------------------------------------------------      Tetraodon nigrov...
AAH90630       --------------------------------------------------------------------------------      house mouse
Feature 1                                                                                      
1G29_1         --------------------------------------------------------------------------------      Thermococcus lit...
1JJ7_A         --------------------------------------------------------------------------------      human
CAA91229       --------------------------------------------------------------------------------      Lactobacillus he...
Q9K974         --------------------------------------------------------------------------------      Bacillus halodurans
AAG27593   617 -------------knameyvfgstfvckttdvakevafnrdirtpsvtlegdifqpsglltggsrkgggdrlrklhdlae 683  thale cress
NP_683234      --------------------------------------------------------------------------------      Thermosynechococ...
NP_775360  709 falrdtlvakdleqatrvafqkdkrwrvvtlqgqiieqagtmtggggrvmkgmmgssfcadvtqeqldkmesalnkevtq 788  zebrafish
NP_781259      --------------------------------------------------------------------------------      Clostridium teta...
CAG07476       --------------------------------------------------------------------------------      Tetraodon nigrov...
AAH90630       --------------------------------------------------------------------------------      house mouse
Feature 1                                                                                      
1G29_1         --------------------------------------------------------------------------------      Thermococcus lit...
1JJ7_A         --------------------------------------------------------------------------------      human
CAA91229       --------------------------------------------------------------------------------      Lactobacillus he...
Q9K974         --------------------------------------------------------------------------------      Bacillus halodurans
AAG27593   684 aeselqghqkrladvesqikelqplqmkftdvyaqlelktydlslflkraeqnehhklgeavkkleeeleeaksqikeke 763  thale cress
NP_683234      --------------------------------------------------------------------------------      Thermosynechococ...
NP_775360  789 lqdcqkrknqleekvhkarcelrdmkntlekytatiqslteqelhlkpqikdleanviaaapdkakqkqmeksleayrkd 868  zebrafish
NP_781259  553 ----deikeqrdmilqnmsdlngvitssneiisdyklklekslgkiieeywkkdilnfisikgkeialevenlkeklkqi 628  Clostridium teta...
CAG07476   532 ---lchqykvhdvpvgteqtkamitqvcsssflmpafrfqgritrlmnvssssqvieelnlrgavhhgrkvhaeeacekr 608  Tetraodon nigrov...
AAH90630   596 ----aleidnavvanslidmrsietvlliknnsvaravmqsqkppkncreaftadgdqvfagryyssestrpkflsrdvd 671  house mouse
Feature 1                                                                                      
1G29_1         --------------------------------------------------------------------------------      Thermococcus lit...
1JJ7_A         --------------------------------------------------------------------------------      human
CAA91229       --------------------------------------------------------------------------------      Lactobacillus he...
Q9K974         --------------------------------------------------------------------------------      Bacillus halodurans
AAG27593   764 laykncfdavsklensikdhdknregrlkdlekniktikaqmqaaskdlkshenekeklvmeeeamkqeqssleshltsl 843  thale cress
NP_683234      --------------------------------------------------------------------------------      Thermosynechococ...
NP_775360  869 feaasnkagkveaevkrlhtlivdinshklkaqqdkldqintqldqcssavtkaqvaiktagrnlkksedgvsrleqeis 948  zebrafish
NP_781259  629 eednkkkiniknslikleeeieennilleklneeykdsfakvkseessilaiekeipekfrsvpelnkkiknienkllel 708  Clostridium teta...
CAG07476   609 lreiderlkalqketaaldrrdnellaekkhlselkgkrrqleqkistkqdslrqmeqnitdlkkieeetkgkvsevnsq 688  Tetraodon nigrov...
AAH90630   672 seisdleteienkkghiitlqqrlsalekdikrneellkrcqlhykeikmkirkniseirelenieehqsvdiatledea 751  house mouse
Feature 1                                                                                      
1G29_1         --------------------------------------------------------------------------------      Thermococcus lit...
1JJ7_A         --------------------------------------------------------------------------------      human
CAA91229       --------------------------------------------------------------------------------      Lactobacillus he...
Q9K974         --------------------------------------------------------------------------------      Bacillus halodurans
AAG27593   844 etqistltsevdeqrakvdalqkihdeslaelklihakmkecdtqisgfvtdqekclqklsdmklerkklenevvrmetd 923  thale cress
NP_683234      --------------------------------------------------------------------------------      Thermosynechococ...
NP_775360  949 eneklmeelteqlkkleeqageimqstssaekalpevqdqhravvqeikalqeqehalqkeflsvrlkvehidtaitech 1028 zebrafish
NP_781259  709 nqllekarkeyevinneyislktnkksklenlqellkeieknkdnmnkkiiecglkdynnylavklsedqlksldediqd 788  Clostridium teta...
CAG07476   689 kvamvkvfidsiklkakltmekvylalkmveltaektklendfregasllrsmdqkcsqleqrraqlteqckghmkrams 768  Tetraodon nigrov...
AAH90630   752 eenkikmqmveknmeqqkenmenlkslkieaenkydtiklkinqlseladplkdelnladsevdsqkrgkqhyedkqkeh 831  house mouse
Feature 1                                                                                      
1G29_1         --------------------------------------------------------------------------------      Thermococcus lit...
1JJ7_A         --------------------------------------------------------------------------------      human
CAA91229       --------------------------------------------------------------------------------      Lactobacillus he...
Q9K974     288 --------------yldklefdptrlemiesrlhelqklkrkygdsvdaiveyastieeqldsilhkddrikqleqslet 353  Bacillus halodurans
AAG27593   924 hkdcsvkvdklvekhtwiasekqlfgkggtdydfescdpyvarvkleklqsdqsglekrvnkkvmamfekaedeynalis 1003 thale cress
NP_683234      --------------------------------------------------------------------------------      Thermosynechococ...
NP_775360 1029 nkikhwqkeasklclhhidgvpaeelpalnpdqlqdignpdvikneialledrcanmkpnlgaiaefkkkeelylqrvae 1108 zebrafish
NP_781259  789 ynqnikiikfnlnrainnskdlefidldiikeklekvnqeknqlnreynivfsrldnniktlkeikklnekisekeddyk 868  Clostridium teta...
CAG07476   769 icrmqskdslpedlrnvrlcffgggkqafaklpdtpdeiesrlseersraecftslsenvrmrwfrrdqeikqlekelee 848  Tetraodon nigrov...
AAH90630   832 ldtlnkkrreldmkekelqekmsqarqicperievkksasildkeinrlrqkiqaehashgdreeimkqyqearetyldl 911  house mouse
Feature 1                                                                                      
1G29_1     115 --------------------------------------------------------eidqrvrevaellgltellnrkpr 138  Thermococcus lit...
1JJ7_A     127 -----------------------------------------------------aavksgahsfisglpqgydtevdeags 153  human
CAA91229   336 --------------------------------------------------------ftdakidewleklqlkqhldqvvy 359  Lactobacillus he...
Q9K974     354 mrldlevesaaltnirkqiameltesiheqlralymektsfevkfhetaegkkpfrengvddvefylstnpgepvkplak 433  Bacillus halodurans
AAG27593  1004 kkntiendkskitkvieeldekkketlkvtwvkvnqdfgsifstllpgtmakleppedgnfldglevrvafgkvwkqsls 1083 thale cress
NP_683234  201 erlaplaqdwhrvlsgdretltlsyeshvplgdgtseaivaafsealatrraieflqktslvgphrddvgfclnaqsarq 280  Thermosynechococ...
NP_775360 1109 lddittqrdsfkrgcedlrkqrlhefmagfniitnklkenyqmltlggdaelelvdsldpfsegimfsvrppkkswkkiy 1188 zebrafish
NP_781259  869 iigelarisngdnderitferyvlaayfdeiiaaanirlskmtggrfllsrkeekgkgrrqeglelevfdnytgkarhvk 948  Clostridium teta...
CAG07476   849 kenaleayrkniaeakerwlnplkllveqinekftaffrsmncagevdlhseneedydkygirirvkfhsnthlheltpy 928  Tetraodon nigrov...
AAH90630   912 dnkvrtlrrfiklleeimthryktyqqfrrcltlrcklyfdnllsqraycgkmnfdhknetlsitvqpgegnkasfndmr 991  house mouse
Feature 1                                          ##                                  #       
1G29_1     139 eLSGGQRQRVALGRAIVRk-----------pQVFLMDEPLSNLDakl-rvrMRAELKKLqrql-gvtTIYVTHDQVEAmt 205  Thermococcus lit...
1JJ7_A     154 qLSGGQRQAVALARALIRk-----------pCVLILDDATSALDans-qlqVEQLLYESpery-srsVLLITQHLSLVeq 220  human
CAA91229   360 sLSGGQQKKLQILLMLMTk-----------hNVLLIDEPLSGLDhes-vdlVLQLMQECqekl-qqtFLIISHQIDALad 426  Lactobacillus he...
Q9K974     434 vASGGEISRIMLALKTIFsnh-------qgvTSVIFDEVDTGVSgrv-aqaIAEKIRHIsvg---sqVLCISHLPQVAam 502  Bacillus halodurans
AAG27593  1084 eLSGGQRSLLALSLILALllf-------kpaPLYILDEVDAALDlsh-tqnIGRMIRAHfph---sqFIVVSLKEGMFnn 1152 thale cress
NP_683234  281 fASQGQQRTLVLALKLAElalves--vvgdtPLLLLDDVLAELDlqr-qgiLLEVMGDRyq-----tLMTTTHLAPFAap 352  Thermosynechococ...
NP_775360 1189 nLSGGEKTLSSLALVFALhhf-------kptPLYFMDEIDAALDfkn-vsiVACYIYEQtkn---aqFIIISLRNNMFem 1257 zebrafish
NP_781259  949 tLSGGESFKASLSLALGLadviqsyaggislDTIFIDEGFGTLDpesldnaIETLVELQngg---rlVGIISHVPELKer 1025 Clostridium teta...
CAG07476   929 hQSGGERSVSTMLYLMSLqel-------nrcPFRVVDEINQGMDptn-errVFDIVVRTackettsqYFFITPKLLQNln 1000 Tetraodon nigrov...
AAH90630   992 aLSGGERSFSTVCFILSLwsi-------aesPFRCLDEFDVYMDmvn-rriAMDMILKMadsqrfrqFILLTPQSMSSlp 1063 house mouse
Feature 1                          
1G29_1     206 mgdrIAVMNr--------GV 217  Thermococcus litoralis
1JJ7_A     221 a-dhILFLEg--------GA 231  human
CAA91229   427 fcdyRLVFAd--------QQ 438  Lactobacillus helveticus
Q9K974     503 adthLYISKkevg--grvTT 520  Bacillus halodurans
AAG27593  1153 a-nvLFRTKfvd----gvST 1167 thale cress
NP_683234  353 w-rqQAQILkvt---agtIA 368  Thermosynechococcus elongatus BP-1
NP_775360 1258 a-drLIGIYkth----npTK 1272 zebrafish
NP_781259 1026 i-dsILEIIptk----egSK 1040 Clostridium tetani E88
CAG07476  1001 y-aeEMTVLcvh---ngaYM 1016 Tetraodon nigroviridis
AAH90630  1064 s-skLIRILrmsdpergqTT 1082 house mouse

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