Conserved Protein Domain Family
ABCF_EF-3

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cd03221: ABCF_EF-3 
ATP-binding cassette domain of elongation factor 3, subfamily F
Elongation factor 3 (EF-3) is a cytosolic protein required by fungal ribosomes for in vitro protein synthesis and for in vivo growth. EF-3 stimulates the binding of the EF-1: GTP: aa-tRNA ternary complex to the ribosomal A site by facilitated release of the deacylated tRNA from the E site. The reaction requires ATP hydrolysis. EF-3 contains two ATP nucleotide binding sequence (NBS) motifs. NBSI is sufficient for the intrinsic ATPase activity. NBSII is essential for the ribosome-stimulated functions.
Statistics
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PSSM-Id: 213188
Aligned: 109 rows
Threshold Bit Score: 121.402
Created: 12-Jan-2005
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
O94489     435 LCNCEFSLAYgak-ilLNRTRLRLKRgrRYGLCGPNGSGKSTLMRAIvng--qveGFPTHLr---TVYVEHdideseadt 508  fission yeast
NP_295358   78 IALSHAAKEYgpl-tvLQDITFAVEPgdRVGLVGRNGAGKSTLLRLLtgqllpdgGEVRHApnvrARALQQdpvfpagat 156  Deinococcus radi...
P23212       6 IKFNQINHKLtdl-rsLNIDHLYAYQfeKIALIGGNGTGKTTLLNMIaqktkpesGTVETNg--eIQYFEQlnmdvendf 82   Staphylococcus e...
NP_630594    4 LEAAHLEYYLpdgralLGDVSFRVGEgaVVALVGPNGAGKTTLLRLLagelkphgGTVAVGg--gLGVMRQfvgsvrdet 81   Streptomyces coe...
NP_691620    6 FELENIELTYldk-eiLKIDRLAIHQfdRIGIVGKNGSGKSSLLKLLagkikpnkGIVHQHa--sYAYFEQmeapdlhlt 82   Oceanobacillus i...
NP_349608    4 LEINNLKKYFkdr-liLEINNLKIYSgdKIGVVGVNGAGKTTLLNILsgkikaeeGVVKLQa--sYSYISQlddmys--- 77   Clostridium acet...
CAC96152     4 IEINQLKIEIgdr-tlVEIPHLLVDKkaRIGIIGQNGLGKTTLMEVIagvkeatsGNITSYg--kLAYIKQlhtd----- 75   Listeria innocua
AAB95639     4 IDMKNVKKYYadk-liLNIKELKIYSgdKIGIVGKNGVGKTTLLKIIkglieideGNIIISekttIKYISQleephskii 82   Staphylococcus a...
NP_775053    5 IKARNIRLDYagr-dvLDIDELEIHSydRIGLVGDNGAGKSSLLKVLngeivlaeATLQRFg--dFAHISQlggieietv 81   Citrobacter freu...
NP_784040    4 INLKNIQKDMagr-plFTIDRLVANAgdKIGVVGRNGAGKSTLAHLLtgtdrdytGQIMVDe--pVSYVAQiap------ 74   Lactobacillus pl...
O94489     509 psvdfilqdpavpikd-----------------------------------------rdeivkalkensftdelinmpig 547  fission yeast
NP_295358  157 idtvlesafrdldaleaelaaaaaamssgseaa------ilhhealleqfarrggyerrsrkeqvtlafgfrgrehdpvt 230  Deinococcus radi...
P23212      83 ntldgs-------------------------------------------------------------lmselhipmhttd 101  Staphylococcus e...
NP_630594   82 tvrdllvsvapprireaaravdtaehaimtvddeaaqltyaqalsdwaeargyeaetlwdmcttaalgmpydkaqwrqvr 161  Streptomyces coe...
NP_691620   83 gnedp--------------------------------------------------------------allgklhvpsqld 100  Oceanobacillus i...
NP_349608   78 ----------------------------------------------------------------------------qrek 81   Clostridium acet...
CAC96152    76 ------------------------------------------------------------------------------ks 77   Listeria innocua
AAB95639    83 dgky----------------------------------------------------------------asifqvenkwnd 98   Staphylococcus a...
NP_775053   82 edram---------------------------------------------------------------lsrlgvsnvqnd 98   Citrobacter freu...
NP_784040   75 ------------------------------------------------------------------------------tf 76   Lactobacillus pl...
O94489     548 sLSGGWKMKLALTRAMFKnPDILLLDEPTNHLDvvnvawLENFLVNQKDvsSIIVSHDSGFLdhvvqaIIHYEr-FK 623  fission yeast
NP_295358  231 gLSGGERTRLGLAALLVEnPDVLLLDEPTNHLDivmvewLEGFLGRYPGa-VLVISHDRQFLdnvtkeTAYLRg-GT 305  Deinococcus radiodu...
P23212     102 sMSGGEKAKYKLANVISNySPILLLDEPTNHLDkigkdyLNNILKYYYGt-LIIVSHDRALIdqiadtIWDIQedGT 177  Staphylococcus epid...
NP_630594  162 tLSGGEQKRLVLEALLRGtDEVLLLDEPDNYLDvpgkrwLEERLAETRKt-VLFVSHDRELLaraaekIVSVEp-GP 236  Streptomyces coelic...
NP_691620  101 sISGGEQTRLKLTQLLSEyREALFIDEPTTHLDqdgvafIQSELEYYYGa-LVLVSHDRTLLdqlvstIWEIHd-GS 175  Oceanobacillus ihey...
NP_349608   82 nLSGGERTKLKIKNSFKEnAEILMADEPTANLDiaasnkLEKMLLDFNGa-LILVSHDRELLdkvcnkIIEIEn-GK 156  Clostridium acetobu...
CAC96152    78 tQSGGEKTRKAIQHAMRQnPSILLADEPTSNLDvesvkhLERQWSDFHGa-LMIISHDRAFLdalcteIWEIKn-QE 152  Listeria innocua
AAB95639    99 nMSGGEKTRFKLAEGFQDqCSLMLVDEPTSNLDiegielITNTFKEYRDt-FLVVSHDRIFLdqvctkIFEIEn-GY 173  Staphylococcus aureus
NP_775053   99 tMSGGEETRAKIAAAFSQqVHGILADEPTSHLDlngidlLIGQLKAFDGa-LLVISHDRYFLdmvvdkIWELKd-GK 173  Citrobacter freundii
NP_784040   77 dQSGGQAMLTRIRQALSArPTILILDEPSSNLDethqqwLINQLQRFRGl-LLLISHDRQLLnavttqTWAVEh-QK 151  Lactobacillus plant...
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