Conserved Protein Domain Family
release_prfH

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TIGR03072: release_prfH 
putative peptide chain release factor H
Members of this protein family are bacterial proteins homologous to peptide chain release factors 1 (RF-1, product of the prfA gene), and 2 (RF-2, product of the prfB gene). The member from Escherichia coli K-12, designated prfH, appears to be a pseudogene. This class I release factor is always found as the downstream gene of a two-gene operon. [Protein synthesis, Translation factors]
Statistics
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PSSM-Id: 213768
Aligned: 8 rows
Threshold Bit Score: 307.084
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_010993114   4 TYLQITSGRGPVECCRVVALVLEKILREAQKRKLRVEILEKETGPVNRTLLSVVVALEGAGCDVLADEWEGTVLWIARSP 83  Bacteroides fra...
WP_000602085   2 ILLQLSSAQGPDECCLAVKKALDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGEKAMAFSERWCGTLLWICTSP 81  Salmonella ente...
WP_011095119   2 ILLQLSAAQGPDECMLATAKALHALTRDAARQGIECEIIETEVGKRAGTLRSALVLLNGEQAEPLAASWCGTLQWTCNSP 81  Pectobacterium ...
WP_011107793   5 VYLQITSGRGPAECCRVVALVLERIVRQAQASGLKMEMIEREVGPVNRTLLSATIALQGAASGELADEWEGTVQWIAQSP 84  Bacteroides the...
WP_010966654   1 MWLQISAGTGPVESCRFVYLFLNLVKKECKYRNIKIEVLDFVPGEKIGTLKSVFLKLSGEGAKTYASSITGTHLLIWESE 80  Clostridium ace...
WP_011060393   2 MLLQLSSAQGPAECELAVTHALRRLHHEAEAQNVRLGIIEQVASQARDAHRSVLVSLDGEHAANLARRWTGTLLWICKSP 81  Pseudomonas pro...
WP_011003997   2 ILLQFSSAQGPAECELAVLKGLACLQRESALAGVRVEVLEQEDGEHPGTLRSALVSLEGDAEAAVAQRWEGTIQWTCPSP 81  Ralstonia solan...
WP_003114116   2 ILLQLSAAQGPAECCLAVAKAFERLCLEAAQAGVEVEVIEEVAGERPRTWRSLLLGLRGTAAEALAERWCGGIQWICPSP 81  Pseudomonas
WP_010993114  84 YRIHHRRKNWFVGVQTFllS--ESCEATEDDIRYETLRASGPGGQHVNKTESAVRAVHIPSGISVVASDQRSQWQNKKLA 161 Bacteroides fra...
WP_000602085  82 YRPHHGRKNWYVGIGRF--S--ADEHIQSDEIRFETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLA 157 Salmonella ente...
WP_011095119  82 WRKGGGRKNWFIGVARF--H--QEQAFADDEIRFETTKSSGPGGQHVNKTESAVRATHVASGITVKVQSERSQHANKRLA 157 Pectobacterium ...
WP_011107793  85 YRIYHKRKNWFVGVHSFvlS--ESQEATERDFRYETLRASGPGGQHVNKTESAVRAVHIPSGMSVVASDQRSQWQNKKLA 162 Bacteroides the...
WP_010966654  81 YRKNHRRKNWFIAVNSF--SyeTNEDLNDKDIIIEKMRSSGKGGQHVNKTETAVRITHKKTGIVVNSSEERSQFANIKLA 158 Clostridium ace...
WP_011060393  82 LRPAHRRKNWYFAGQPF--C--ALEEAEGGEIRFEAMRASGPGGQHVNKTDSAVRATHVATGISVKVQSERSQHDNKRLA 157 Pseudomonas pro...
WP_011003997  82 YRPRHARKNWFFGVARC--A--APAATLPSEIRFETARASGPGGQHVNKTESAVRAIHLATGISVKVQTERSQHANKRLA 157 Ralstonia solan...
WP_003114116  82 YRARHARKNWFIGAERF--A--APPASLEGEIRFETLRSSGPGGQHVNTTDSAVRATHLASGISVRVQSQRSQHANKRLA 157 Pseudomonas
WP_010993114 162 TERLLVKLTAWNIEQAMIQAQTNWSNHNSLQRGNPVKIIQEELR 205 Bacteroides fragilis
WP_000602085 158 RLLIAWRLEQQRQNECAALKSERRLFHHQIERGNPLRIFKGMAF 201 Salmonella enterica
WP_011095119 158 CYLIAYRLEALQQQQHAELRAQRRLFHHQIERGNPVKVFKGEDF 201 Pectobacterium atrosepticum
WP_011107793 163 TERLLVKLSSWTMEQAMIQAQENWSNHNHLQRGNPVKVIREPLI 206 Bacteroides thetaiotaomicron
WP_010966654 159 KARLIIELKKLSDERRKRNRSERWTAGINIVRGNPVNVYTYKEL 202 Clostridium acetobutylicum
WP_011060393 158 RLLIQQRLADRQEQSVQELRLQRRDAHHRVERGNAVRTFSGSAF 201 Pseudomonas protegens
WP_011003997 158 VLLLAHKLASHDAAASAAQRAHRRTLHHQVARGNPRRVFKGERF 201 Ralstonia solanacearum
WP_003114116 158 ILLIARRLADQASSAADALRAERRRAHGRISRGAARRVFRGERF 201 Pseudomonas
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