1FVU,1JZN,1FVU,1FM5,1QO3,1HTN,1T8C,1TDQ,1LIT,2PY2,1IXX,1EGG,1DV8,2AFP,3M9Z,1YPO,1MPU,3FF7,1B6E,1HUP,1BUU,3BDW


Conserved Protein Domain Family
CLECT

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smart00034: CLECT 
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C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
Many of these domains function as calcium-dependent carbohydrate binding modules.
Statistics
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PSSM-Id: 214480
View PSSM: smart00034
Aligned: 234 rows
Threshold Bit Score: 42.2018
Threshold Setting Gi: 82013687
Created: 12-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1FVU_B          2 C-----PPDWSSY-----EGHCYRFFKEW-----MHWDDAEEFCTEQqtG--AHLVSFQSKEEADFVRSLTSem----lk 60   jararaca
Q19516         41 C-----PPGWKTFirppgVRICLKIINQN-----ATYLEAQNICRKQ--Yn-SRIHGIENKEEHNWVKMKSRlvi--kqg 105  Caenorhabditi...
Q60767       1240 CpspvqSTPWIPF-----QNSCYNFMITNnrhktVTPEEVQSTCEKL--HpkAHSLSIRNEEENTFVVEQLLyf-----n 1307 house mouse
NP_001023122  283 C-----PVPAVNF-----KGLCYKMCRGL-----VKFEDSCTWCN-------GTMATISSGEENDFVSRVFGsnd---et 337  nematode
NP_507555      43 C-----PTGWEEFer-psGTWCIKMYAa-----lGDRANAISACAAE--E--AVLSGVQNQAELDYMITAFNavdtimam 107  nematode
NP_494586      24 C-----PDTWKWFkr-srGGWCMKVFAa-----iGTQADAEAKCKAE--G--AVVAGVQNTEEIKWMSATLQslq--tnp 86   nematode
NP_494567      25 C-----PTGWTWFlr-srGGWCMKVFTe-----aLNQPSAEAKCKAA--E--AVLAGIQNKEEVAWMSKELT-------- 81   nematode
ADP21890      207 C-----DAGWRRFnr-psGGWCVKVFGa-----rMNQADAQIQCQSH--G--ATLSGLQNSEEAQQISNLALsvi--san 269  nematode
NP_494581      84 C-----LPGWRFTnr-psGGWCMRVFTGi----hDAKIEAERACAAK--G--GTLTGLQNRDDALFIQRSLLali--pqn 147  nematode
NP_494585      44 C-----EPGWKFFnr-psGGWCMKVINEy----kGAKAEAEKECKAV--G--STLSGIQNKAEASYIQSALLaqlpasvn 109  nematode
1FVU_B         61 GDVVWIGLSd-----------------VWNKCRFE-WTDGmeFd--yDdYYLIAe--------yE------CVASKPTn- 105  jararaca
Q19516        106 ASFMWVGARrkswcykteaqlktddkcKSGLNSFE-WDDQ--LtdgsYlFTQWDktisapegimSnnapedCVVMNVHeg 182  Caenorhabditi...
Q60767       1308 YIASWVMLGi------------------tYENNSLmWFDK--Ta---LsYTHWRtgrptv------kngkfLAGLSTDg- 1357 house mouse
NP_001023122  338 TRQIWIGNTe-------------------SSGYLN-WSQG--Q------PTKPNdgl------------dyCISMDLSag 377  nematode
NP_507555     108 DTTFWIGGErtsaclt-----sgltatCTALTSFE-WTDG--SttgtD-GWIWRsgepnn-----aggleiCATVEITy- 172  nematode
NP_494586      87 VGTLWVGAKrtkpcis-----sgltkqCSAITSFY-WSDQ--SavgvQ-GFFWRagepnn-----alggqgCAQVYSTt- 151  nematode
NP_494567      82 -GTMWIGTKrtppcmn-----sgvtkqCSQITSYY-WTDG--StvgvQ-GFYWNsgepnn------qggqgCAKLITSs- 144  nematode
ADP21890      270 SGSVWIGTRrtaacmk----qwlntngCTRTNAFY-WTDG--SatgiA-GFVWDtlqpdn-----eklsqsCAVLLASr- 335  nematode
NP_494581     148 SASVWVGIQrtaactr-----qqitaaCTRTTSFE-WTDG--SatgtD-GFVFQpgqpdn-----illnqnCALLLASr- 212  nematode
NP_494585     110 SGSLWVGIQrvkkcla-----qklsatCSARTAFQ-YTDG--SvtgtD-GFVFQkgqpdn-----mygkqnCAIFLASr- 174  nematode
1FVU_B        106 ---nKWWIIPCTR--FKNFVCE 122  jararaca
Q19516        183 --daPIDDKDCSLp-QAGVLCG 201  Caenorhabditis elegans
Q60767       1358 ----FWDIQSFN---VIEETLH 1372 house mouse
NP_001023122  378 strgKYKYLPCQSt-VINSLCV 398  nematode
NP_507555     173 ---vSLADQRCDRadFNGYACG 191  nematode
NP_494586     152 ---nDMDDVGCGSt-NQGYICG 169  nematode
NP_494567     145 ---sVLDDVACTTelTNGYVCG 163  nematode
ADP21890      336 ---sTVTWGGKFWqpAKMDDNN 354  nematode
NP_494581     213 ---tPTITARGTYyaATLEdvn 231  nematode
NP_494585     175 ---tPTIVS-GSFfaGTLDdtg 192  nematode
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