1W0R,1VEX


Conserved Protein Domain Family
TSP1

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smart00209: TSP1 
Click on image for an interactive view with Cn3D
Thrombospondin type 1 repeats
Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.
Statistics
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PSSM-Id: 214559
View PSSM: smart00209
Aligned: 151 rows
Threshold Bit Score: 29.0919
Threshold Setting Gi: 2499468
Created: 12-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1W0R_A     112 WSGWGPWEPCSVTCSKg-TRTRRR-ACNHPApkCGGHCPGQAq-ESEACDTqQ-VCP 164  human
O02661     136 WSAWSSWGPCDRSCGSg-LRARFRsPSNPPAasGGAPCEGQRq-ELQACYS---ACG 187  cattle
O08722     249 WSSWAEWSPCSNRCGRg-WQKRTRtCTNPAPlnGGAFCEGQAc-QKTACTtvcpvdg 303  Norway rat
Q26261     277 WSSWSDWSACSSSCHRy--RTRA--CTVPPPmnGGQPCFGDDl-MTQECPA-Q-LCT 326  Caenorhabditis elegans
DAA30265  2537 WAEWEAWGPCSVSCGGg-HRSRRRsCMDPPPknGGAPCPGPPq-ERAPCGL-Q-PCa 2589 cattle
AAB59433    84 LGDFGPWSDCD-PCIE--KQSKVR-SVLRPSqfGGQPCTEPl-vAFQPCIP-SkLCK 134  human
DAA30265  1909 WSAWSPWAECLgPCGSrsVQWSFRsPNNPRPagRGHQCRGLHr-KARRCQT-E-PCE 1962 cattle
NP_510116 1268 WTDWTAWSECTDYCRNg-HRSRTRfCANPKPsqGGAQCTGSDf-ELNPCFD-PaRCH 1321 nematode
CAA29037    21 WSRWSEWTPCN-SCt--kIRHRSRsVEVFGQf-GGKPCQGQPigEQQRCTS-DaVCE 72   rainbow trout
P79755      39 WSRWAPWSSCD-PCTn--TRRRSRgVEVFGQf-AGIACQGSVg-DREYCIT-NaKCN 89   torafugu
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