1QIB,2JSD,1GKC,1KAP


Conserved Protein Domain Family
ZnMc

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smart00235: ZnMc 
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Zinc-dependent metalloprotease
Neutral zinc metallopeptidases. This alignment represents a subset of known subfamilies. Highest similarity occurs in the HExxH zinc-binding site/ active site.
Statistics
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PSSM-Id: 214576
Aligned: 75 rows
Threshold Bit Score: 46.9599
Created: 12-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1QIB_A         1 RKPKWDK--------NQITYRI-------IgytPDLDPEtvDDAFAR-AFQVWSDVT-----------PLRFSRIhDg-- 51  human
O05859        83 GDKTWRVvpgttpqvGQGTVKVfrytveiE---NGLDPT--MYGGDN-AFAQMVDQTltnpkgwthnpQFAFVRI-Ds-- 153 Mycobacterium t...
AAC33448     115 NSIIFHKn-------SIHPYFYn-----tQ---TTIYPHq-QEVISD-ILSEIAHIT-----------QAKFVAS-Npe- 164 Proteus mirabilis
AAA86729      66 AEVTYSF----------PKWEGkfnqfgnK---NPYEFNelQKEHARkSLDAWSDIA-----------NIKFTEV-Avgn 120 Proteus mirabilis
1KAP_P        72 TKPNDFF---------NTPWKYvsdiyslG---KFSAFSaqQQAQAKlSLQSWSDVT-----------NIHFVDA-Gq-- 125 Pseudomonas aer...
Q07162        70 AALTYSFl--------QSVADSdmp-dnfK---GFVKFNaaQIQQTKlALQSWADVA-----------NVTFSEA-Kd-- 123 Erwinia chrysan...
YP_003883055  75 ANLTYSF---------LNTFSStpn--ghT---GPVKFTpvQMQQAKlSLQSWADAA-----------NLTFTEV-Sp-- 126 Erwinia chrysan...
CAA39139      89 VKLTFSFp-------DYKFSSTnva--gdT---GLSKFSaeQQQQAKlSLQSWADVA-----------NITFTEV-Aa-- 142 Serratia marces...
Q07295        72 ANLTFKF---------LQSARStpd--gdT---GFVKFNaaQVAQAKlALQSWADLA-----------NITFTEV-Tg-- 123 Erwinia chrysan...
AAC38325     253 GLKRYVN----------FHFVLy------T---TEYSCP--SGDAKE-GLEGFTASL-----------KSNPKAe----- 294 Bacteroides fra...
1QIB_A        52 -------EADIMINFGRWEhg--dgYPfdgkdglLAHAFApgt------gvgGDSHFDDd----ELWSLGKGvgys---- 108 human
O05859       154 ------gKPDFRISLVSPTtv--rgGCg------YEFRLEtscynpsfggmdRQSRVFIn---eARWVRGAVpfegdv-- 214 Mycobacterium t...
AAC33448     165 ------fDADIKFGFYDDFhishgsIEfsy--ttRGFATYpsry----stpiKKINIDEqyqysGTIFLNLSshqyykii 232 Proteus mirabilis
AAA86729     121 vdgmkasDVKTDITFGNIYdp---nGTf------QAYATLpntyay-gkdlsGQAWFSd-----YHYAGNTTpelgn--- 182 Proteus mirabilis
1KAP_P       126 -------GDQGDLTFGNFSss---vGG-------AAFAFLpdvp----dalkGQSWYLIn----SSYSANVNpangn--- 177 Pseudomonas aer...
Q07162       124 -------GERATIQFGNYTlt--pdGNtdn--nsQAFGFYpgnw-----kwaGSAWFn------YNQADNQRpdine--- 178 Erwinia chrysan...
YP_003883055 127 -------NQKANITFANYTrn--adGSlnt--dtQAYAAYpgth-----pvsGSAWFn------YNQSSIRNpdtde--- 181 Erwinia chrysan...
CAA39139     143 -------GQKANITFGNYSqd--rpGHydy--gtQAYAFLpntiwq-gqdlgGQTWYn------VNQSNVKHpated--- 201 Serratia marces...
Q07295       124 -------NQSANVTFGNYTrd--ssGRldy--gtQAYAYLpgsg-----sasGTTWYn------YNVDNIRSpdkme--- 178 Erwinia chrysan...
AAC38325     295 -------GYDDQIYFLIRW------GTwdn--kiLGMSWFns--------ynVNTASDFe----ASGMSTTQlmy----- 342 Bacteroides fra...
1QIB_A       109 --------------------------------------------------lflVAAHEFGHAMGLE-HSQDPGA------ 131 human
O05859       215 -----------------------------------------------gsyrqyVINHEVGHAIGYLrHEPCDQQg----- 242 Mycobacterium t...
AAC33448     233 hqhdldnyiktegnigdafnfkdngtvliikktntlietlknnkyqpgtyhykVILHEVGHALGLN-HSWQYLEykd--k 309 Proteus mirabilis
AAA86729     183 -------------------------------------------------ygrlTIIHEIGHTLGLM-HPGDYNAgqn-vp 211 Proteus mirabilis
1KAP_P       178 -------------------------------------------------ygrqTLTHEIGHTLGLS-HPGDYNAgeg-dp 206 Pseudomonas aer...
Q07162       179 -------------------------------------------------fgrnTLTHEIGHTLGLY-HPGDYDAsdg-np 207 Erwinia chrysan...
YP_003883055 182 -------------------------------------------------ygrhSFTHEIGHALGLS-HPAEYNAgegdis 211 Erwinia chrysan...
CAA39139     202 -------------------------------------------------ygrqTFTHEIGHALGLS-HPGDYNAgeg-np 230 Serratia marces...
Q07295       179 -------------------------------------------------ygrqTLTHEIGHALGLN-HPGDYNAge---- 204 Erwinia chrysan...
AAC38325     343 ---------------------------------------------------pgVMAHELGHILGAE-HTDNSKD------ 364 Bacteroides fra...
1QIB_A       132 -LMAPIYTYt-KNFRLs---QDDIKG--IQELYGA 159 human
O05859       243 -GLAPVMMQq--tFSTs---NDDAAK--FDPDFVK 269 Mycobacterium tuberculosis
AAC33448     310 nHVLASLKYsvMGYDIp---TSEHAD--FGGLYPM 339 Proteus mirabilis
AAA86729     212 gYLKSDYAEdsRQYTVmsywDEYETGahFQGAYAG 246 Proteus mirabilis
1KAP_P       207 tYADATYAEdtRAYSVmsywEEQNTGqdFKGAYSS 241 Pseudomonas aeruginosa
Q07162       208 gYKDVTYAEdtRQFSImsywNEGYTGgdFHGYHAA 242 Erwinia chrysanthemi
YP_003883055 212 yKNSAAYAEdsRQFSImsywEVENTGgdFKGHYSA 246 Erwinia chrysanthemi str. 3937
CAA39139     231 tYNDVTYAEdtRQFSLmsywSETNTGgdNGGHYAA 265 Serratia marcescens
Q07295       205 --gNPTYREdtRQFSImsywSEKNTGgdFKGHYAA 237 Erwinia chrysanthemi
AAC38325     365 -LMYATFTGy--lSHLs---EKNMDIi--AKNLGW 391 Bacteroides fragilis
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