1NTL,3GNM,2QHR,2IG2,1IGT,1IAO,1F58,2RGS,1IAO,1TCR,2HJK,1OW0,3P73,1CD1,1K8I,1YPZ


Conserved Protein Domain Family
IGc1

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smart00407: IGc1 
Click on image for an interactive view with Cn3D
Immunoglobulin C-Type
Statistics
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PSSM-Id: 214651
View PSSM: smart00407
Aligned: 50 rows
Threshold Bit Score: 63.1015
Threshold Setting Gi: 439896
Created: 12-Jul-2011
Updated: 16-Jan-2013
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1NTL_A    466 KVSLTCMITDFFPEDITVEWQwNGQ-PAENYKNTQPIMNTNGSYFVYSKLNVQKsNWEAGNTFTCSVLHEGLHNH 539 house mouse
CAB98264   15 EATLRCWALGFYPAEITLTWQrDGEdQTQDTELVETRPAGDRTFQKWAAVVVPS---GEEQRYTCHVQHEGLPKP 86  human
P21612     19 KNVLNCFAAGFHPPKISITLMkDGv-PMEGAQYSDMSFNDDWSFQRLVYADF---TPSSDAVYTCKVDHETLKEP 89  turkey
NP_999143  40 PNYLNCYVSGFHPPQIEIDLLkNG--EKMNAEQSDLSFSKDWSFYLLVHTEF---TPNAVDQYSCRVKHVTLDKP 109 pig
NP_571238  39 PNTLICYVSSFHPPDISIELLkNGQ-VMSDTKQTDLAFEKGWQFHLTKSVAF---TPEKGDEYTCSVRHMKETKK 109 zebrafish
P55077     17 PNILNCYVSQFHPPHIEIEMLkNGK-KIPEIEMSDLSFSKDWSFYILAHTEF---TPTDSDTYSCRVTHVSMKEP 87  Ryukyu mouse
AAA37391  221 HRQLVCHVSGFYPKPVWVMCM-RGDqEQQGTHRGDFLPNADETWYLQATLDV---EAGEEAGLACRVKHSSLGGQ 291 house mouse
2HJK_A    198 EATLRCWALGFYPAEITLTWQrDGEdQTQDTELVETRPAGDRTFQKWAAVVVPS---GEEQRYTCHVQHEGLPKP 269 human
3P73_B     20 KNVLNCFAAGFHPPKISITLMkDGVp-MEGAQYSDMSFNDDWTFQRLVHADF---TPSSGSTYACKVEHETLKEP 90  chicken
1K8I_A    113 PNTLVCFISNLFPPTLTVNWQlHSApV-EGASPTSISAVDGLTFQAFSYLNF---TPEPFDLYSCTVTHEidryt 183 house mouse
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