1VCB,1HV2


Conserved Protein Domain Family
Skp1

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smart00512: Skp1 
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Found in Skp1 protein family
Family of Skp1 (kinetochore protein required for cell cycle progression) and elongin C (subunit of RNA polymerase II transcription factor SIII) homologues.
Statistics
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PSSM-Id: 214704
Aligned: 38 rows
Threshold Bit Score: 85.808
Created: 12-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1VCB_B     16 AMYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQF-AENEt---NEVNFREIPSHVLSKVCMYFTYKVRYTNS----- 86  human
Q15369     16 AMYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQF-AENEt---NEVNFREIPSHVLSKVCMYFTYKVRYTNS----- 86  human
O13292      3 QDFVTLVSKDDKEYEISRSAAMISPTLKAMIEGPFRE-SKGR------IELKQFDSHILEKAVEYLNYYLKYSGVse--- 72  baker's yeast
Q21968      7 VILYKLRSTDGQRFLADRRTIGMIGRIEDLFRNAGLD-LIPAdq-lqPIQLE-IPATVMRKVIEWCDHHKHDPPYdesep 83  Caenorhabditis ele...
Q21969      7 APLYKLKSEDGQIFNVERGPMKFCAFINQKFIDHGVN-DRNCer-aDPILVP-FHSSIVQAVIEWLYHYQDNPLArrdsk 83  Caenorhabditis ele...
Q21367      7 KPVFKIQSCDGQVFAVEDWFIQKSKCFSVVLAQMNNL-VQPH-----PLKTS-ICSFVLVKIIEWCYHHRNEDQDhaq-- 77  Caenorhabditis ele...
NP_508325  68 SKYVKLVSNDDHEFIIKREVAMTSKSLRELFANPTVDlAAAN----NTVYFSDFQSHILQKVCHYLAYKTKYRHSrva-- 141 nematode
NP_596724   3 KEYVRLISGDGFVFILEKEIACLSGTIRAILNEGIFS-EAQK----NECTFPDIRATLLEKVCEYLHYNYRYKNql---- 73  Schizosaccharomyce...
1HV2_A      3 QDFVTLVSKDDKEYEISRSAAMISPTLKAMIEGPFRE-SKGR------IELKQFDSHILEKAVEYLNYNLKYSGVse--- 72  baker's yeast
AAC62260   16 AMDGKLVSSDDDDFIVKREHTRASGIRKAVLSGPGQS-AENEtdqvNFREIPPRCYPKHAKACIYFTYKVHYSNS----- 89  human
1VCB_B     87 ------STEIPEFP-IAPEIALELLMAANFLDC 112 human
Q15369     87 ------STEIPEFP-IAPEIALELLMAANFLDC 112 human
O13292     73 -----ddDEIPEFE-IPTEMSLELLLAADYLSI 99  baker's yeast
Q21968     84 -etndiPDWDASFLmVRHNMLFDIIRAARDFtv 115 Caenorhabditis elegans
Q21969     84 iryhdfSEWDKQFFnVESGVLFALLNASHALGV 116 Caenorhabditis elegans
Q21367     78 ---rilTAWDVQFIrTNSAILLHLAEAAFRLEI 107 Caenorhabditis elegans
NP_508325 142 -----------ppFdIPPDIAMDLLAAANELEC 163 nematode
NP_596724  74 ----diPKFD-----IPPEMVLELLVTAEYLEa 97  Schizosaccharomyces pombe 972h-
1HV2_A     73 -----ddDEIPEFe-IPTEMSLELLLAADYLSI 99  baker's yeast
AAC62260   90 ------STEIPEFL-----TALEVLMASDFLDI 111 human
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