3TMK,1G3U,4TMK


Conserved Protein Domain Family
Tmk

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COG0125: Tmk (this model, PSSM-Id:223203 is obsolete and has been replaced by 439895)
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Thymidylate kinase [Nucleotide transport and metabolism]
linked to 3D-structure
Statistics
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PSSM-Id: 223203
Aligned: 70 rows
Threshold Bit Score: 129.332
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3TMK_A     3 GRGKLILIEGLDRTGKTTQCNILYKKLQPN-----CKLLKFPERs-TRIGGLINEYLTDDS-----FQLSDQAIHLLFSA 71  baker's yeast
11498906  54 DGMRFIVIDGMDGAGKDTHAEFVRRRYAERg---sVIVRTHPSD--SLFGRVAKASLLRR------GKFFHLMAAIFYFF 122 Archaeoglobus fulgidus
15595138  59 ILKNFYCIEGIDGSGKTSITNKLKALCNDEs---rYYFTKEPSS--GIIGEMIRKQLMNf-----eNPLEESTFAYLYAA 128 Lyme disease spiroc...
19704658   1 -MGKIIVIEGTDSSGKETQTKLLYERVKKIyd--kTIKISFPNYd-SPACEPVKMYLAGAFgt-daTKVNPYPVSTMYAI 75  Fusobacterium nucle...
20091018   3 QKPMFICITGIDGVGKTTHVNLIMGYLREKgikcqYKWLRSHYFfsLPLLAFCRIAGYTRVst--lGDSQKCSYHEFYKS 80  Methanosarcina acet...
15679111   1 ------MIDGLDGAGKDTHAELIRRRYLERge--hVVFRSHPEDd-NPYGKRAREALLRG------GKVNHIRAAIFYAL 65  Methanothermobacter...
15898045   1 MNILIIAFEGIEGSGKTSHLEATKKYLEKEgy--gVVTFGLQMS--KLIGDRIAQVKRN-------IIFERRTLFLAYVT 69  Sulfolobus solfatar...
14285510   1 MRGLLIAFEGIDGSGKSSQAVLLKDWIEMRr---dVYLTEWNSS--EWIHDIIKEAKKKN-------MLTSITFSLIHAT 68  Sulfolobus solfatar...
15639345   3 ILHNFVVFEGIDGTGTSTQLRALERHFQARk---dMVFTQEPTG--GEIGTLIRDVLQKR------VIMSSKALGLLFAA 71  Treponema pallidum
16331301  25 MAALFIVLEGIDGSGKTTQGDLLLAHFQRQgl--aAVLSPEPTN--GPVGRLIRQALQGDLftyndARQFEAQMGYLFAA 100 Synechocystis sp. P...
3TMK_A    72 NRWE-IVDKIKKDLLEG---KNIVMDRYVYSGVAYSAakGTNGMDLDWCLQP----DVGL---LKPDLTLFLSTQDVDNN 140 baker's yeast
11498906 123 DVIYsLLRYYGR----A---ETVIFVRYLGGVLYLPE--RYARVLYRFFR-------SVLp---TSPYMFYLEAEPEVCM 183 Archaeoglobus fulgidus
15595138 129 DRHDhLYKKGGILEILNtksRKIITDRYLFSSIAYQG---KLGYELNKNFP-------LP------EKVFFIETDPNIAY 192 Lyme disease spiroc...
19704658  76 DRYAsFKQDWEKKYIDD---YVIITDRYVTSNMIHQAskIKNNEKKDEYLKWlvdlEYNKneiPEPDIVIFLKMPIDKAK 152 Fusobacterium nucle...
20091018  81 RFVSaFYPWILFFDTLLfttIKVYIPMFFGTSIVCDRfvYDTLIDLAVAIKDn---EIYK----KPVGKLFLKLIPKNAI 153 Methanosarcina acet...
15679111  66 DVIRsLWLYHWRSNPGP---DTLIFSRYLMGVAYLPG--PLSSVLYRLLS-------RVLp---TTEYMFFLDVSPEESL 130 Methanothermobacter...
15898045  70 DLADqIENYVKPSIDSG---FIALADGYTLTLTSWG---LTRGLEKEWIDDVl---SMLP----KPSISLPLISTPDEIV 136 Sulfolobus solfatar...
14285510  69 DFSDrYERYILPMLKSG---FVVICDRYVYTAYARD---VVRNVDFDWVKRLy---SFAIk----PNFTFYIRVTPEIAL 135 Sulfolobus solfatar...
15639345  72 DRHEhLEGAGGINDCLAe-gKIVLCDRYVFSSLVYQG--MAVSGSFAYELN-----KEFP----LPEVVFYFDAPIEVCV 139 Treponema pallidum
16331301 101 DRHYhLYHPGDGVEAKLaqqCHVITTRYYFSSLAYN---CHTEADWEFVQRLn---QSFP----QPDWVIYLDLPVDLAL 170 Synechocystis sp. P...
3TMK_A   141 AEKSGFGD------------ERYETVK----FQEKVKQTFMKLLDKEIRkgdeSITIVDVTNKg--IQEVEALIWQIVEP 202 baker's yeast
11498906 184 ERVARRSEs-----------EMFENIEd----FRRVRERAFRILKGWK------F--INTNRP---IEETRREIERILSE 237 Archaeoglobus fulgidus
15595138 193 ERIQKNRTq----------sDLFELEKy--kTFEQIALKYLKIFKKLEK----KINVIYINNS---IKDNLDKNAKKIFN 253 Lyme disease spiroc...
19704658 153 ELMENRKNk----------iDGSERKDihevNEDYLKRSYENATAISKKynwcEIECVENNKIk-sIEKINDEIFSKIKE 221 Fusobacterium nucle...
20091018 154 FTMLNLDKsti-------isRRNELKDd--eSFNEHYILYQEFADKFS------IETVNNYGN---VNDVNRLIIDIFTS 215 Methanosarcina acet...
15679111 131 RRLMERDEh-----------EMFENLDd----LTSTREKALRLADGWY------I--INTEDP---IEDVQSRIDEILDR 184 Methanothermobacter...
15898045 137 RRIIKKRGy----------lDPLETGIdi-cIKEDTFEAYIDYINRFQE----ALMSISSRENiiyTDKEFDEVQKEIVR 201 Sulfolobus solfatar...
14285510 136 ERIRKAKRkikpqeagidilGEIPLEEgflkYQSRIVEIYDKIAKEESN-----FITIDGNRP---LKDVQIDIRKILGE 207 Sulfolobus solfatar...
15639345 140 ERITARGLq-----------TELYEYTs---FQEKARKGYETIFRKCRHly-pAMKVIEIDARe-eIEVVHERILHHLRE 203 Treponema pallidum
16331301 171 QRLGDRQQled-------qaPRECYEQr--eKLISVHRNYDRIFAHYQG----QLCRLDASLP---VEQLHQAIITKVEE 234 Synechocystis sp. P...
3TMK_A   203 VLSTH 207 baker's yeast
11498906 238 LDrrf 242 Archaeoglobus fulgidus
15595138 254 LIKF- 257 Lyme disease spirochete
19704658 222 IIGG- 225 Fusobacterium nucleatum subsp. nucleatum ATCC 25586
20091018 216 RMKCC 220 Methanosarcina acetivorans C2A
15679111 185 LDGDV 189 Methanothermobacter thermautotrophicus str. Delta H
15898045 202 RIDNI 206 Sulfolobus solfataricus
14285510 208 YIDNS 212 Sulfolobus solfataricus
15639345 204 YRRLK 208 Treponema pallidum
16331301 235 ML--- 236 Synechocystis sp. PCC 6803
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