Conserved Protein Domain Family
MutS

?
COG0249: MutS (this model, PSSM-Id:223327 is obsolete and has been replaced by 440019)
DNA mismatch repair ATPase MutS [Replication, recombination and repair]
Statistics
?
PSSM-Id: 223327
Aligned: 59 rows
Threshold Bit Score: 317.304
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
19075844  369 SAWATFKPFEKQFWKIKKDLMDTVVFFQKGKFYELYENDAAIGHQVFSLKLTDRVN-----MKMVGIPEASFDYWASQFI 443  fission yeast
15896285      --------------------------------------------------------------------------------      Clostridium aceto...
15896798      --------------------------------------------------------------------------------      Clostridium aceto...
15927623      --------------------------------------------------------------------------------      Staphylococcus au...
19112759    9 ANERTDEARMFNFYEKMPKDTNTVRVFDRGEFYVAIGEDASFVAQNAYHTTSVLKHhnvsnTSYCNLSPSLFIKFAEDVL 88   fission yeast
19112758      --------------------------------------------------------------------------------      fission yeast
13541505      --------------------------------------------------------------------------------      Thermoplasma volc...
13541506      --------------------------------------------------------------------------------      Thermoplasma volc...
14318519    1 -------------------MSESNLSSFISTNYFNLRSAANSSNSISKPSTKKSIRnqkspTNISSWALKKKTLQIAETT 61   baker's yeast
2506880    11 SDVSEERNFYKKYTGLPKKPLKTIRLVDKGDYYTVIGSDAIFVADSVYHTQSVLKNcq--ldPVTAKNFHEPTKYVTVSL 88   baker's yeast
19075844  444 A-KGYRIARVDQLETALGKEIkdrqrtqkeekVVQR--GLTQVLTSGTLVDEAMLtSDLstyCMAIKESLQSDNEEp--- 517  fission yeast
15896285      --------------------------------------------------------------------------------      Clostridium aceto...
15896798      --------------------------------------------------------------------------------      Clostridium aceto...
15927623      --------------------------------------------------------------------------------      Staphylococcus au...
19112759   89 SnLAKRVEIWGANSAKTGFELlkq-----aspGNMQ--MLEDLLVSENYQESTAI-SDSs--VSSVLLAVTTRVKQdq-- 156  fission yeast
19112758      --------------------------------------------------------------------------------      fission yeast
13541505      --------------------------------------------------------------------------------      Thermoplasma volc...
13541506      --------------------------------------------------------------------------------      Thermoplasma volc...
14318519   62 WeNNEKDSTHSHYLMTGSMAS-----------RTAT--SLSRYSTNASLLGPSID--------CVLCCIYEVPRDIs--- 117  baker's yeast
2506880    89 QvLATLLKLC--LLDLG-YKVe----------IYDKgwKLIKSASPGNIEQVNEL-MNMnidSSIIIASLKVQWNSqdgn 154  baker's yeast
19075844  518 -SFGICFIDTSTGGFHMCEFTddihRTKLDTLLTQVRPKELILEKSKISQK---------SIRAIKYCvssssiwnFIKP 587  fission yeast
15896285    1 ---------MDKNEEFLRRIEn---FKSEKSKLKQNYNMMSLLRFIVF------------IMAISFTY--------FLVK 48   Clostridium aceto...
15896798      --------------------------------------------------------------------------------      Clostridium aceto...
15927623      --------------------------------------------------------------------------------      Staphylococcus au...
19112759  157 rIIGVAFIDPILKKLGVSEFVdsdaYTNFEALIVQVGAKECIISQSGHESTngnsavsinTAEINRLRniiegcgaLVTT 236  fission yeast
19112758      --------------------------------------------------------------------------------      fission yeast
13541505      --------------------------------------------------------------------------------      Thermoplasma volc...
13541506      --------------------------------------------------------------------------------      Thermoplasma volc...
14318519  118 tRIGLCIINCNTGQMYLSDFMdsqiYIRVVHKLQIYQPTEILIPSSSLAPT---------VSKLATMIkfnvaetvKIEE 188  baker's yeast
2506880   155 cIIGVAFIDTTAYKVGMLDIVdnevYSNLESFLIQLGVKECLVQDLTSNSNs--------NAEMQKVInvidrcgcVVTL 226  baker's yeast
19075844  588 YTEFWDNERVEREIIAGDYFKNGLEGAPKILksylseKPLAISAFGALFWYLrq----lkLDKDMCSMGNFDEYDASQQS 663  fission yeast
15896285   49 NPSIFILLG---TILSFVLFVYILKIHEKIS--------DRLEVANNLVEVN---------EKYLKRIDGTWTSFQDFGE 108  Clostridium aceto...
15896798    1 ---------MDEDKLYMYSAIATLALG--IS---------AFVFFQLAIGYK----------NYIYFLGTALSIAAIFLA 50   Clostridium aceto...
15927623    1 ------------------------------------------------------------MSTNQTFLIFVIAIILLTSV 20   Staphylococcus au...
19112759  237 IRSSEFSARDVELELSKVLDSPVTHALVPELg-----LQLAMASCNALLRYLgpallnpdMEDDRENTSRKLHLYHHNLE 311  fission yeast
19112758      --------------------------------------------------------------------------------      fission yeast
13541505      --------------------------------------------------------------------------------      Thermoplasma volc...
13541506      --------------------------------------------------------------------------------      Thermoplasma volc...
14318519  189 GSRKCFNSQDGLAAITKYLMDDTKKDLKIEEii---dKTFALCAASAAISYMeei---isKSSRNLNAFRKLRIQFEGTE 262  baker's yeast
2506880   227 LKNSEFSEKDVELDLTKLLG-DDLALSLPQKy-----SKLSMGACNALIGYL--------QLLSEQDQVGKYELVEHKLK 292  baker's yeast
19075844  664 TSLLMNGQTLKNLEIFSNS------------FDGGSEG------TLFHLLCRCVTPFGKRLFHTWLCHPLRSGTAINARL 725  fission yeast
15896285  109 EFQDEEYPYLGDLDIFGKK-------------------------SLFQLINTCVTFLGRKKLAETLKKPDKNIEKIRMRQ 163  Clostridium aceto...
15896798   51 FYMKAKIIHKLNYERFKRY-----------------WGe-----FQKRKRNTRNVKKFFEFHKEDNADEFNVDEQTWEDL 108  Clostridium aceto...
15927623   21 IGIVGRYMSRQRLLKSMET------------LWQTISP------LEAFIRPNSHFDYEYKLYKEKFESHSLVDDKTWSDL 82   Staphylococcus au...
19112759  312 QYMRLDIAAVRSLNLLPPP------------NGNAHKTm-----SLYGLLNHCRTAMGARNLRRWIVQPLLDAKSIERRH 374  fission yeast
19112758      --------------------------------------------------------------------------------      fission yeast
13541505    1 -----------------------------------------------MVFNSILWPDKKAESLFDSDPDFFADLNLDMII 33   Thermoplasma volc...
13541506    1 ---------------------------------------------MNVDLLFNDTDGRVNESVPWNSNDLEKDLDLEILY 35   Thermoplasma volc...
14318519  263 NTMLIDSKTVRGLELVENK--------------LDKNGi-----SLWKFLDTTSTKMGQRSLRNSILQPLTDRGSIEMRL 323  baker's yeast
2506880   293 EFMKLDASAIKALNLFPQGpqnpfgsnnlavSGFTSAGnsgkvtSLFQLLNHCKTNAGVRLLNEWLKQPLTNIDEINKRH 372  baker's yeast
19075844  726 DVVELIADNP-VIRDTIWG---FLHKLPDLERLISRVHAGRSKPADFVRVLEGFQRINSAFDQLREEFMEV-----AEGT 796  fission yeast
15896285  164 KAVEELKD------------------KIDFCQNVESQGNSNELGTDPSELFNDLENTEHLFKNFLVEAFIR------ILP 219  Clostridium aceto...
15896798  109 NMNKVFELADrTLTSPGEe---MLYKIFKTPEFSKEKLLERNSIIKIFQNNKEVREKVGLELIKLGRKKENg----VTDL 181  Clostridium aceto...
15927623   83 NMNAIFHKMN----YNLT----AIGEMKLYACLRGMLSITNKSLLSLFNDNAEFRKNVTYHLALIGKTVYP-----TFPD 149  Staphylococcus au...
19112759  375 DLVSALVEDA-EARQLLLDddhLLRSIPDIPKLCRRLTRGSASLEDVVRIYQMAKALPKIVTVLDSLTSEH------KDL 447  fission yeast
19112758      --------------------------------------------------------------------------------      fission yeast
13541505   34 DGITSGYTDY-NLRPFFI----TMPRSLDTVKYRQEIFKDLLNSEVFALMKDFSEKMNTIYKWVSTADRLG-----GYQK 103  Thermoplasma volc...
13541506   36 NVMAGKDTYV--FDVCRRt---ILNSVNDKSTIIYRQDVLKDAIRNQNIIRKIYSTIVTAESEAKRSYFWIs----RSNP 106  Thermoplasma volc...
14318519  324 EALEELKAND-DLLQKLRl---EMKSLPDLDKLFSRLLCINHSAIKPDQRINYVLLLKETLQSVKSLKDALn---dQLIQ 396  baker's yeast
2506880   373 DLVDYLIDQI-ELRQMLTSe--YLPMIPDIRRLTKKLN-KRGNLEDVLKIYQFSKRIPEIVQVFTSFLEDDsptepVNEL 448  baker's yeast
19075844  797 LLGEIIqSAPN----MKEELEAWTRAFNWQKASEEGv--------FEPEIGFEAEYDTSQKYQSe-LKNELYALLEQYkK 863  fission yeast
15896285  220 VVS---------------IVVSIVIIYMKLKAYYWV----------IAALFVLHMLINIMGYLK--VAPQLRIIYKIR-K 271  Clostridium aceto...
15896798  182 IWKDIEvDYKY------KYVFNFLFWGTLASILTIP----------ILKYGYIILLAAFILMNTi-EHNKFKNKVELY-- 242  Clostridium aceto...
15927623  150 QITPVK-----------RQNILFLCPFLPVISFAVI----------FINSQVGILLFLMSCLFN--IILSATLKRTYEdD 206  Staphylococcus au...
19112759  448 VDKVYTnVLNNhcknLEKLIELVETTIDLEALDSHQ---------YIIRAEFDEELLDLRQRLD--ELQHSIFEEHKR-V 515  fission yeast
19112758    1 --------------------------------------------------------------------LRGRSSHYTElS 12   fission yeast
13541505  104 QGWLLEaALFY-------FNTMADFSLKLDNLDFKSq-------gLLMLREYLRELVHTDAFIVa-SREANTVKSLLSaI 168  Thermoplasma volc...
13541506  107 EFALHEsISIL------KIYLTAIENIRDVGREALP---------LLHSNGLKQLFTMIMQEFNheYVAEVLNHLEILrF 171  Thermoplasma volc...
14318519  397 SRLISEtKKIFnndaIMEIEKLINSCINEDCVWASSaiqllnqrsYAVKSDSNGLLDVSRQIYKe-VKEEFFREVEDLtA 475  baker's yeast
2506880   449 VRSVWLaPLSHhvepLSKFEEMVETTVDLDAYEENNe--------FMIKVEFNEELGKIRSKLD--TLRDEIHSIHLD-S 517  baker's yeast
19075844  864 QLRCSSLN---FKNIGKEVYQ---VEVPSDVKVPVNW-------CKMSGTKKTNRYYNDELRKKIKKLLEAEELHLAIMS 930  fission yeast
15896285  272 DLKSYFRIl--DIIENEDFKSd-yLKELKSVLYFENK-------PAYRIFKSLISITEKLEFKNNIFGYVIFGIIMLWDY 341  Clostridium aceto...
15896798  243 VQSLGYLN---GIINTANRIS---KINCPEIKYYTDSlk----aTSSKLMKVAKKTAGIERVEGVDIIGDALYNILPIEE 312  Clostridium aceto...
15927623  207 LKSIFYAS---NVLKQG--YT---ISKIKHAPQPEVNf-----kQFRTARHLTSVLAEVNDEDIGAMVIKLVKLIFMLDY 273  Staphylococcus au...
19112759  516 GSDLHQDTekkLHLEQHHLYGw--CLRLTRTEAGCLRgrs-shyTELSTQKNGVYFTTKRLHSLNNSYMD---------- 582  fission yeast
19112758   13 TQKNGVYF---TTKRLHSLNNs-yMDHQKSYRYHQNGl------AREVIKIAATYGPPLEAIGQVIAHLDVILSFAHAST 82   fission yeast
13541505  169 RYEMLIES---SKVTIRRDKGkddYNEIVKKLFDKFT-------NRNATSKSLKRFYETSMNQVEAAVLELIARLFPEEF 238  Thermoplasma volc...
13541506  172 HNGISVRG---SLGFANSLIGy--NLLMPDAKSNKILd-----kISLIRERHYTYVLPDRDEIGAQELADMRAKSIRETA 241  Thermoplasma volc...
14318519  476 KNKINLDH------NYDSARGf--YLRIKRQEFTDDVatlpdvfISRTIKKNYIECTTLNIIKKNARLKEVMEEILLLSE 547  baker's yeast
2506880   518 AEDLGFDPdkkLKLENHHLHGw--CMRLTRNDAKELRkhk--kyIELSTVKAGIFFSTKQLKSIANETNILQKEYDKQQS 593  baker's yeast
19075844  931 RMQEKFYIRFDSNYEQWLA-LIKYTASIDCFFSLSQAAaaLGEPYCRPEIIEQKDg-hLYFEELRHPCINASAAST--FV 1006 fission yeast
15896285  342 QCVFEFERWKDRYGKIVSK-WVDAIGEFESLSSLSVIFr-LNSHMVFPELSESGLv--FSGKEVGHPLIGEEKR-----V 412  Clostridium aceto...
15896798  313 RKFFNSINDIRKLRKELKE-LYKALGEIDALMSIASFRq-WIQYYCEPEFVDNGRi--IKCSEIYHPLLENPVS------ 382  Clostridium aceto...
15927623  274 VLFHSIQKSYTTHMNELKN-CFDYIAELDNHYALAMYRr-TLECYTEPQIDDTNDg--IVFSELTHPLIADAVA------ 343  Staphylococcus au...
19112759      --------------------------------------------------------------------------------      fission yeast
19112758   83 VAVIPYVRPNIVDSSIAQE-KHGQSSNILDIVSLEDTP--NFEEIRRTLENNHCAr--LYLKQARHPCLEAQDDVK--FI 155  fission yeast
13541505  239 KALSSFYENHKNFIDPTTAqMYRELQFYLSYIEYISPLekTGLKFCIPEVGTVRDi--YCIECFDLALAQRLLQSGsvVI 316  Thermoplasma volc...
13541506  242 AILTESAQNVLAFIDRIKEgVAFYLGCLNLLDELTKIG--APISFPVPENNENNG---MYYTGIYDVALCLRTKTVp--V 314  Thermoplasma volc...
14318519  548 ETVDELLDKIATHISELFM-IAEAVAILDLVCSFTYNL--KENNYTIPIFTNN-----LLIRDSRHPLLEKVLKN---FV 616  baker's yeast
2506880   594 ALVREIINITLTYTPVFEK-LSLVLAHLDVIASFAHTSsyAPIPYIRPKLHPMDSerrTHLISSRHPVLEMQDDIS--FI 670  baker's yeast
19075844 1007 PNDVVLGGeSPNMIVLTGPNMAGKSTLLRQVCIAVIMAQLGCWVPAKRASITPMTSIYTRLGANDDIMSARSTFMVELSE 1086 fission yeast
15896285  413 NNDVDMNN---KIFVITGANMAGKTTFLRTVGINLVLAYAGAPVCASNLKCSVVD-IYTSMRITDDLNNGMSTFYVELMR 488  Clostridium aceto...
15896798  383 -NSIDLDG---KGIMLTGTNMAGKSTFLRTIGLNSLLAQT-IYTCAAKVYKTSFFKIMTSISPEDNISSGKSYYFREAEA 457  Clostridium aceto...
15927623  344 -NDFSLSQn----ILLTGSNASGKSTFMKSIAINIILASAIQTVTASKFVYQPGI-VFTSMANADDVLSGDSYFMAELKS 417  Staphylococcus au...
19112759      --------------------------------------------------------------------------------      fission yeast
19112758  156 PNDVNLEHgSSELLIITGPNMGGKSTYIRQVGVITVMAQIGCPVPCEVADLDIIDAILARVGASDSQLKGISTFMAEMLE 235  fission yeast
13541505  317 ANDFRLSR-NENIIVVTGPNSGGKTTFARSIGQVFFLAMLGLPIPGSKAKLFQVDNIYTHFEKSEDLENLRGKLEDDLIR 395  Thermoplasma volc...
13541506  315 RNSLSAEH--DSIIFITGANRGGKSTLLRAIGQAQLMMQCGMFVAAESFSAYIASGIFTHFKREEDSGMSMGKLEEEMNR 392  Thermoplasma volc...
14318519  617 PNTISSTKhSSSLQIITGCNMSGKSVYLKQVALICIMAQMGSGIPALYGSFPVFKRLHARVCN-DSMELTSSNFGFEMKE 695  baker's yeast
2506880   671 SNDVTLESgKGDFLIITGPNMGGKSTYIRQVGVISLMAQIGCFVPCEEAEIAIVDAILCRVGAGDSQLKGVSTFMVEILE 750  baker's yeast
19075844 1087 TKKILDECGPKS--LVILDELGRGTSTYDGHAIAYAVLHHLVSNIGCLGFFSTHYqSLCVDFMHH--RQVRLMQMAa--- 1159 fission yeast
15896285  489 VKKMIENVKKKTpmIFLIDEIFHGTNSNDRIAGAKKVLKILNEN-WIFGLISTHD-FELCELESDekRRIKNYHFS---- 562  Clostridium aceto...
15896798  458 LKRIINQCSDDRpvLCIIDEIFRGTNPIERVNASAEILNYIEKH-NTLTLVATHD-LELTEILKEd-YLCCYFSED---- 530  Clostridium aceto...
15927623  418 IKRIVEIPDNQKi-YCFIDEIFKGTNTTERIAASESVLSFLHEKSNFRVIAATHD-IELAELLKQr---YENYHFN---- 488  Staphylococcus au...
19112759      --------------------------------------------------------------------------------      fission yeast
19112758  236 TATILRAATPRS--LIIIDELGRGTSTTDGFGLAWAITEHIVTQIGCFCLFATHY-HEMTKLSEEi-TTVKNLHVT---- 307  fission yeast
13541505  396 MRKILDSATERS--LIIINEMLSSTASKDAISIGTKIIDLINKK-NSICVYVTFF-EELARIRGV----IS--MVS---- 461  Thermoplasma volc...
13541506  393 MSLIIDHIKAGG--RLFLNESFSSTNVREGSEIAKQVINALLDS-GVKVIFVTHF-NELAESYLGs-VYNPTFLRA---- 463  Thermoplasma volc...
14318519  696 MAYFLDDINTET--LLILDELGRGSSIADGFCVSLAVTEHLLR-TEATVFLSTHF-QDIPKIMSKk-PAVSHLHMD---- 766  baker's yeast
2506880   751 TASILKNASKNS--LIIVDELGRGTSTYDGFGLAWAIAEHIASKIGCFALFATHF-HELTELSEKl-PNVKNMHVVahie 826  baker's yeast
19075844 1160 --AVDEKIRr--VTFLYKLEDGICPKSYGMNVASMAGLPEKVIDAAEEKASELEQAS-----------ASFIN------- 1217 fission yeast
15896285  563 --ETYLEDK---IIFDYKLKDGPSDTTNAKYLMKMIGINVE--------------------------------------- 598  Clostridium aceto...
15896798  531 --IDDEGLQ-----FDYKLKYGICKTRNAVKLLKYLEYPNEIIQKTNDRLAKIL-------------------------- 577  Clostridium aceto...
15927623  489 --EVIENNN---IHFDYKIKPGKANTRNAIELLKITSFPAKIYERAKDNVSNG--------------------------- 536  Staphylococcus au...
19112759      --------------------------------------------------------------------------------      fission yeast
19112758  308 --AYVGDSEskdVALLYNVCEGASDRSFGIHVAKLAHFPPKIIEMASNKAAELEAEDsgaqgdtqevkSKKEGmaiv--- 382  fission yeast
13541505  462 --QVDPIAPe--IRTFRVVRSDPNGLAYATAIAERYGLTYKKIIERVRK------------------------------- 506  Thermoplasma volc...
13541506  464 --ERLDNGK----RTFKILQADPITTSFGYDIFLKVFGESAKT------------------------------------- 500  Thermoplasma volc...
14318519  767 --AVLLNDNs-vKMNYQLTQKSVAIENSGIRVVKKIFNPDIIAEAYNIHSLLKIAKAr----------TENEDsng---- 829  baker's yeast
2506880   827 knLKEQKHDdedITLLYKVEPGISDQSFGIHVAEVVQFPEKIVKMAKRKANELDDLKtnned-lkkakLSLQEvnegnir 905  baker's yeast
19075844 1218 -----ASDDIALMSdf----lQVLRISKSIEPLTAVN----------IPLILDSFE 1254 fission yeast
15896285      --------------------------------------------------------      Clostridium acetobutylicum
15896798      --------------------------------------------------------      Clostridium acetobutylicum
15927623      --------------------------------------------------------      Staphylococcus aureus subsp. aureus N315
19112759      --------------------------------------------------------      fission yeast
19112758  383 -rdimRQWRSNVKPemt--qqQMMDQFQKVIGSFAQqi-------nsNNWLQSRVS 428  fission yeast
13541505      --------------------------------------------------------      Thermoplasma volcanium
13541506      --------------------------------------------------------      Thermoplasma volcanium
14318519  830 ---vvDQKTINQMKrih-nlvAILKECAGNEKEPLTLgkl----keiNSDFIENFE 877  baker's yeast
2506880   906 lkallKEWIRKVKEeglhdpsKITEEASQHKIQELLRaianepekenDNYLKYIKA 961  baker's yeast
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap