1G0U,1FNT,1FNT,1RYP,1FNT,1G0U,1RYP,1G0U,1G0U,1PMA,1PMA


Conserved Protein Domain Family
PRE1

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COG0638: PRE1 (this model, PSSM-Id:223711 is obsolete and has been replaced by 440403)
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20S proteasome, alpha and beta subunits [Posttranslational modification, protein turnover, chaperones]
linked to 3D-structure
Statistics
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PSSM-Id: 223711
Aligned: 79 rows
Threshold Bit Score: 124.332
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1G0U_1    14 STYGAYNTQIANAGASPMVNTQQPIVTGTSVISMKYDNGVIIAADNLGSYGSLLRFNGVERLIPVGDNTVVGISGDISDm 93  baker's yeast
19173194   1 ----------------------MITKTGTTIVGMKYKTGVILAADTRSTQGPVVSDKNCVKIHQITDKIMCCGAGTAAD- 57  Encephalitozoon cun...
19074754   1 ------------------MMSNEKEMTGTTIIAIKYDDGVLIGADSRTSMGAYVSSRVTDKLTQITDKIFVCRSGSSAD- 61  Encephalitozoon cun...
15827688   1 MSFPYFISPEQAMRERSELARKGIARG-RSVVALAYAGGVLFVAEN--P-----SRS-LQKISELYDRVGFAAAGKFNE- 70  Mycobacterium leprae
15841601   1 MSFPYFISPEQAMRERSELARKGIARA-KSVVALAYAGGVLFVAEN--P-----SRS-LQKISELYDRVGFAAAGKFNE- 70  Mycobacterium tuber...
15609247  30 rrQAPELLPASISGGAPLAGGDAQLPHGTTIVALKYPGGVVMAGDRRSTQGNMISGRDVRKVYITDDYTATGIAGTAAV- 108 Mycobacterium tuber...
1346786    8 kgfdFEYYQRNLLLQEKGFPTPKATSTGTTIVGVIAKDCIVLGADTRATAGPIIADKNCKKLHLISPNIWCAGAGTAAD- 86  fission yeast
17380244   1 ----MATTVKDTMNVDINAIKKGEIRMGTTITALRYKDGVILAADSRTTMGAYIANRVTDKLTQLTDNIWCCRSGSAAD- 75  fission yeast
1172606    1 ---------MNGIQVDINRLKKGEVSLGTSIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDKIWCCRSGSAAD- 70  baker's yeast
130879     2 aglsFDNYQRNNFLAENSHTQPKATSTGTTIVGVKFNNGVVIAADTRSTQGPIVADKNCAKLHRISPKIWCAGAGTAAD- 80  baker's yeast
1G0U_1    94 qhIERLLKDLVtENAYDNPLADAEe-------ALEPSYIFEYLATVMYQRRSkm-nPLWNAIIVAGVQSn---GDQFLRY 162 baker's yeast
19173194  58 --ASRVARMAS-RELRLFQNKYLR--------LPLVSHFRKVCTQHLHKYgg----gIGAALIVGG-IDs---EGCHLYE 118 Encephalitozoon cun...
19074754  62 --TQMISSYLR-MYLSMYSQLEDS--------IPQVQRAAALASKIIYENp-----sLLAGLIVAGYDDk---PR--VFN 120 Encephalitozoon cun...
15827688  71 --FDNLRRGGIqFADTRGYAYDRR--------DVTGRQLANVYAQTLGTIFTeqakPYEVELCVAEVAHygetKPPELYR 140 Mycobacterium leprae
15841601  71 --FDNLRRGGIqFADTRGYAYDRR--------DVTGRQLANVYAQTLGTIFTeqakPYEVELCVAEVAHygetKPPELYR 140 Mycobacterium tuber...
15609247 109 --AVEFARLYA-VELEHYEKLEGVpltfagkiNRLAIMVRGNLAAAMQGLla---lPLLAGYDIHASDPq---SAGRIVS 179 Mycobacterium tuber...
1346786   87 --TEFVTSMIS-SNIELHSLYTNR--------KPRVVTALTMLKQHLFRYqg----hIGAYLVLGG-YDc---KGPHLFT 147 fission yeast
17380244  76 --TQTVADLLK-YYLSMYRIQFGH--------DPSVHTAATLASEMCYQNkn----mLSAGLIVAGYDEk---TGGDVYS 137 fission yeast
1172606   71 --TQAIADIVQ-YHLELYTSQYG---------TPSTETAASVFKELCYENkd----nLTAGIIVAGYDDk---NKGEVYT 131 baker's yeast
130879    81 --TEAVTQLIG-SNIELHSLYTSR--------EPRVVSALQMLKQHLFKYqg----hIGAYLIVAG-VDp---TGSHLFS 141 baker's yeast
1G0U_1   163 VNLLGVTY--SSPTLATGFGAHMANPLLRKVVdresdIPKTTVQVAEEAIVNAMRVLYYRDARSSRNF------SLAIID 234 baker's yeast
19173194 119 IHPHGSEn--SALFVSLGSGSLGAIATLESRY-----Ra-MDKDEAIDLACDAVKAGILNDLYSGSNI------DVCVID 184 Encephalitozoon cun...
19074754 121 ISLGGSLt--ERDWAIGGSGSAFIYGYCDVNW-----RSgMSLEEGIRFVRNAVSCAINRDNASGGCI------RMSAIS 187 Encephalitozoon cun...
15827688 141 ITYDGSINd-EPHFMVMGGTTESIANALKESY-----AENASLTDALGIAVAALRAGSADAAGSDQPTlgvaslEVAVLD 214 Mycobacterium leprae
15841601 141 ITYDGSIAd-EPHFVVMGGTTEPIANALKESY-----AENASLTDALRIAVAALRAGSADTSGGDQPTlgvaslEVAVLD 214 Mycobacterium tuber...
15609247 180 FDAAGGWNieEEGYQAVGSGSLFAKSSMKKLY-----SQvTDGDSGLRVAVEALYDAADDDSATGGPD------LVRGIF 248 Mycobacterium tuber...
1346786  148 IAAHGSSd--KLPYVALGSGSLAAISVLETKY-----QPdLERHEAMELVKEAIEAGIFNDLGSGSNC------DLVVID 214 fission yeast
17380244 138 IPLGGSLh--KQPLAIGGSGSAFIYGFCDANF-----REnMTQEEAVEFLKNAVALAMERDGSSGGTI------RMVILN 204 fission yeast
1172606  132 IPLGGSVh--KLPYAIAGSGSTFIYGYCDKNF-----REnMSKEETVDFIKHSLSQAIKWDGSSGGVI------RMVVLT 198 baker's yeast
130879   142 IHAHGSTd--VGYYLSLGSGSLAAMAVLESHW-----KQdLTKEEAIKLASDAIQAGIWNDLGSGSNV------DVCVME 208 baker's yeast
1G0U_1   235 KN---TGLTFKKNLQVENMKWDFAKDI 258 baker's yeast
19173194 185 Ys----GVEFLRNYRRIGVSEN-TDTL 206 Encephalitozoon cuniculi
19074754 188 Rt----------GVQRYFYPGDKVLQ- 203 Encephalitozoon cuniculi
15827688 215 ANrprRAFRRIIGSGLEALLREKDSKG 241 Mycobacterium leprae
15841601 215 ANrprRAFRRITGSALQALLVDQESPQ 241 Mycobacterium tuberculosis CDC1551
15609247 249 Pt---AVIIDADGAVDVPESRIAELAR 272 Mycobacterium tuberculosis H37Rv
1346786  215 Ee---KATPY-RGYSKPNERATKQSKY 237 fission yeast
17380244 205 Kd----------GMERKFFAIDTANPI 221 fission yeast
1172606  199 Aa----------GVERLIFYPDEYEQL 215 baker's yeast
130879   209 Ig---KDAEYLRNYLTPNVREEKQKSY 232 baker's yeast
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