Conserved Protein Domain Family
CrfC

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COG0699: CrfC (this model, PSSM-Id:223771 is obsolete and has been replaced by 440463)
Replication fork clamp-binding protein CrfC (dynamin-like GTPase family) [Replication, recombination and repair]
Statistics
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PSSM-Id: 223771
Aligned: 44 rows
Threshold Bit Score: 76.4823
Created: 7-Oct-2002
Updated: 23-Jan-2015
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
15614263  148 TTEQLYTTDGIVYVMDYNHVQSETNLYFLKQLsdekkpivivinqidkhdeqevpfaTFDQSVKDVFKKWGIEFETIYYT 227  Bacillus halodurans
1730891   495 seklvflqeqarlennarektdrlwaiweeesacpmhidtewfkskktrvaapeqkqGRSQLTAQPMPKSEIKMEQEMPL 574  Bacillus subtilis
15791778    2 KELFQKIWQNELQFLNFDAKFQDKSKLDTAEC-------------------------AIILSVNKDNYERYFLLKEFQEL 56   Campylobacter jejuni
15791779      --------------------------------------------------------------------------------      Campylobacter jejuni
15645579      --------------------------------------------------------------------------------      Helicobacter pylo...
15645582   65 SSVLPTGITPETSLATELHYSAKERIEAFSNN-------------------------DEKTESFELNEQSFEAIKENATK 119  Helicobacter pylo...
17231419  143 KTEYLAVLASAFRPQESLDIAVLNEVEILLDT-------------------------PRNQGFKNVEIKPHSNNWKTLIS 197  Nostoc sp. PCC 7120
17231906   80 RGKSTFLNALIGENLLPSDVNPCTAVLTVLRY-------------------------GAEKKVTIHFNDGKSPQTLDFQS 134  Nostoc sp. PCC 7120
15611963    1 ------------------------------------------------------------MRLNEVIGLFKESVDKVFDR 20   Helicobacter pylo...
15611964      --------------------------------------------------------------------------------      Helicobacter pylo...
15614263  228 SMKVAnhplnQFstfaeDVKKRLYYSDSLIPFAKqrlwqsfyygiERRLRDELEQTIEAIHEEMSANGYDPAVLTEKTKL 307  Bacillus halodurans
1730891   575 QDQIK-----RFytlsdILGECSMLLKQTSAFREr-----------VKRLEERKFTLALFGGFSSGKSSFANALVGERVL 638  Bacillus subtilis
15791778   57 CKKID------------LRVDIFSMQNAQICILN------------LFKSGFISKQDLLKALKILEKISKNTEIFDFILQ 112  Campylobacter jejuni
15791779      --------------------------------------------------------------------------------      Campylobacter jejuni
15645579      --------------------------------------------------------------------------------      Helicobacter pylo...
15645582  120 YSYLK-----VY-----LNNEALKNSAPLVFVDM-----------PGFDSPISSHTHAILEYLERGVHFVILTSVEEGNL 178  Helicobacter pylo...
17231419  198 NSKTN-----TN-----QPRVSIYYEGLKKFQEFnqq-----lgnYCNQISQIVQTCHELGFLAKDLIDEVNGLSKKFQL 262  Nostoc sp. PCC 7120
17231906  135 FKYKY-----TI-----DPAEAKKLEQEKKQAFP------------DVDYAVVEYPLTLLEKGIEIVDSPGLNDTEARNE 192  Nostoc sp. PCC 7120
15611963   21 VSAFT------------WEKYKAKNEDEEDDEAN------------YREFEKIK-KMALYFRDYCMFCLDWYELSQEKIQ 75   Helicobacter pylo...
15611964      --------------------------------------------------------------------------------      Helicobacter pylo...
15614263  308 EAERekvlqlpqtllAKGEQEVSKLFQNVTLFpftttdltrdwlesvqpsykVGLLFSKKKTEAERAsrLQKAVADLQDK 387  Bacillus halodurans
1730891   639 PSSP-----------TPTTATINKITKPING---------------------NLNKTANVVFKTEDD--LTAEILQLTGI 684  Bacillus subtilis
15791778  113 EKVQs----------IDQKALFQNDFKELNTIn-------------------LELQKLSFDENLKSR--LQKTLEKFQNL 161  Campylobacter jejuni
15791779    1 -----------------MQINLLNDFIKAY----------------------ENTYSVSFDDSFKGR--IQELCKELNEP 39   Campylobacter jejuni
15645579    1 -----------------MSVNFFKGIFNDNSRae----------------nhQDNHQNNHQ-VGLKE--RYDLIARILNA 44   Helicobacter pylo...
15645582  179 TKRMvrel----knlLEFDKGLSFILSKTNLRtp----------------sqVGEISHYIQ-DQIQD--HLDLTTHLIHS 235  Helicobacter pylo...
17231419  263 HRFRlavi----gefSQGKSTLLNALLGEEIQpmre-------------ipcNGNIVVLKYGTQKRV--IYRYKDGSEKE 323  Nostoc sp. PCC 7120
17231906  193 LSLGyv-------nnCHAILFVMRASQPCTLGerry-------------lenYIKGRGLSVFFLINA--WDQVKESLIDP 250  Nostoc sp. PCC 7120
15611963   76 EEYR-------------DCIDYDNKLLQLHYS--------------------LENLQTLRELKEEADn-NYQESLNDEKL 121  Helicobacter pylo...
15611964    1 -----------------MSINFFNDKFSTT-----------------------ENHHNIEP-VSLKE--RYDLIARILNA 37   Helicobacter pylo...
15614263  388 VKSQLEFHLHRLFQEQIDWERLTNKEEVERAISEVHFKVTPTLFIDHVKIGTTSrey-vfTFTSQltdlickqlkaKALV 466  Bacillus halodurans
1730891   685 PKEPAGRSFTEKWEKAVKKNRLQEEHVKLISNFLLAYEKYQQYIQEQKKLTIPl-----sEL-KPy----------VAEE 748  Bacillus subtilis
15791778  162 EFNIAITGVMNAGKSSLLNALLKEDFLGVSNIPETANLTVLSYGKSEEAKIYFWdkkewqNILESs----------HFNA 231  Campylobacter jejuni
15791779   40 FMHASYALENELKELVFSLDKNVNIAIIGQFSSGKSSLLNLILGRDCLPTGVVP------VTFKP-----------TFLR 102  Campylobacter jejuni
15645579   45 RIENEGLEEYQSVLDNEFLEFASGVDSLKEKEIAL-LTLQEIQKELQLVASYP-------SLFQK-----------TIVA 105  Helicobacter pylo...
15645582  236 NKDNNALLEVADKIDAEKLFSALYLKRLK-------FLNSKLQNSLKSVMESF-------DYSKE-----------KALE 290  Helicobacter pylo...
17231419  324 IPFDEYRQKVSISEDIALNSLNKELKQSDIKEIIVEHSNLALCNSGVEIIDSP-------GLNENp----------ELTA 386  Nostoc sp. PCC 7120
17231906  251 DDVDELKASEDRLRQVFKANLTEYCYVDGQNIYDERVFELSSIQALRRRLKDSQa-----DLTGTgf--------pEFMG 317  Nostoc sp. PCC 7120
15611963  122 QNNLREWRDLKNTPEEENYREFEEIKKMVLYFRDWCMFRLDWYKLRQEEIQKHR------DLMDNd----------NRLL 185  Helicobacter pylo...
15611964   38 KTSNEGLEEYQSILANEFLKFASGVDSLKEKEIAL-LMLQEIQKELQLVASYP-------SLFQK-----------TIVA 98   Helicobacter pylo...
15614263  467 VFQKQQEGIKahvheqleqleeklstlqnVKSYVDKIEEAersfqkqkQHLMEEAERYDDQGQYAKALAVVKNQSNesim 546  Bacillus halodurans
1730891   749 TTACAVKEVT-------------------VYYTCPLTEKG---------ITIVDTPGASSMNKRHTELAFQYIKDAd--- 797  Bacillus subtilis
15791778  232 DLKEFIDKLDk------------------SVNIEDFIKDKpl----iqNIALCELKNFSSAKNKISALIKKIEIKS---- 285  Campylobacter jejuni
15791779  103 YAKEYFLRVE--------------------FEDGSDIITN--------IEKLAFYTDQRNEVKQAKSLHIFAPIP----- 149  Campylobacter jejuni
15645579  106 VGGGFSAGKS--------------------TFLNNLLGLK------------LKLPEDMNPTTAIPTYCLKGKRE----- 148  Helicobacter pylo...
15645582  291 EIQALDLGVK--------------------DIEKTYEKLR------------ANLEEEY-SSVAVGSVVKKVVEE----- 332  Helicobacter pylo...
17231419  387 ITQNLLQDIDaaifv---------tnasrSLTQGERQSLNelrlklngGKDQEPANNLFIVVNFMDLVNTEKSRDQik-- 455  Nostoc sp. PCC 7120
17231906  318 SLNTFLTRER-------------------AIAELRQARTLarqavnhtREAIGRRLPLLDQDVDELKKRIDSVEP----- 373  Nostoc sp. PCC 7120
15611963  186 QLDYSLKNLS--------------------ILKRFKEINE---------KNYQDHLNNEKLQNDLREWRRSKRR------ 230  Helicobacter pylo...
15611964   99 VGGGFSAGKS--------------------TFLNNLLGLK------------LKLPEDMNPTTAIPTYCLKGERE----- 141  Helicobacter pylo...
15614263  547 keatafygiRLPNKSVIADALEEPIKeqdvvfredetkewidRLYQAIEkydtDghpLHHemkKLLERMERyhqqqyVvS 626  Bacillus halodurans
1730891   798 ---------AFFYMTYYQHSFSKGDR----------------SFLRKLG---------------LVKESLS------M-- 829  Bacillus subtilis
15791778  286 ---------HLEFLKNNISIVDTPGLd---------------DVVVQRE--------------IVTNEYLRe-----SdF 322  Campylobacter jejuni
15791779  150 ---------LLEKITLVDTPGLNANE-----------------NDTLTT----------------LDELKN------I-H 180  Campylobacter jejuni
15645579  149 ---------VLMGFSQNGGMVELPHL----------------AFDHQFLn-------------SLGFNLKE------I-M 183  Helicobacter pylo...
15645582  333 ---------VRDQKSYLASLINKPNE-----------------FNSEIEs-------------IMQQSLIK------N-A 366  Helicobacter pylo...
17231419  456 -------krIYNFVEGEKPIITGKNRvhfi--------saqaALRSVMYgyedE---YKKsfdTFIKSIER------F-L 510  Nostoc sp. PCC 7120
17231906  374 ---------EFTKLNHIRDQFQKEIFt---------------TRDTQARkvseS---FRSy--VLNLGNTF------E-T 417  Nostoc sp. PCC 7120
15611963      --------------------------------------------------------------------------------      Helicobacter pylo...
15611964  142 ---------VLMGFSQNGGMVELPHL----------------AFDHQFLk-------------SLGFNLKE------I-M 176  Helicobacter pylo...
15614263  627 LFGAFSAGKSSFAnallgeavlpVSPNPTTATVTTvcrptdqyahrsaiIKMKNRADLDEEIQAVADQLDLKLSlkniqs 706  Bacillus halodurans
1730891   830 DKMFFIINAADLA----------KDKTELETVTDYv-------------SAELVKEGVYEPQLFTVSSKEELVG------ 880  Bacillus subtilis
15791778  323 LIHLMNASQSLTQ----------KDADFLVHCLLNs------------rLSKFLIVLTKADLLSKKDLEEVIVY------ 374  Campylobacter jejuni
15791779  181 GAIWLSLIDNAGK----------KSEedaikanlellgensicvlnqkdklsaeeldnvlnyaksvflkyfneliaisck 250  Campylobacter jejuni
15645579  184 PFMLLSAPSVPFE----------FLCFIDTPGFN------------------SAKQGYTGGD------------------ 217  Helicobacter pylo...
15645582  367 KLEIEKIN-LSFS----------KDFHAEFESLN------------------KLSSDLSVNL------------------ 399  Helicobacter pylo...
17231419  511 ILERGRLKLQPLP----------DQLNKIIQRIINnl----------reFKDELESKIKIAEEGKRKILEQIGEfs---- 566  Nostoc sp. PCC 7120
17231906  418 DFLRYQPELNLLD----------FLSNGKREAFNTa-------------LQKAFEQYITDKFAAWTLTAEKDINv----- 469  Nostoc sp. PCC 7120
15611963      --------------------------------------------------------------------------------      Helicobacter pylo...
15611964  177 PFMLLSAPSVPFE----------FLCFIDTPGFN------------------PANQGYTGGD------------------ 210  Helicobacter pylo...
15614263  707 wkpkRMQVATNQQRSYVNYLSTLQASLkdqewtlgseqVIDLEELalwvgteshacliqevmlyydcDLTRAgvvlvDTP 786  Bacillus halodurans
1730891   881 -----KPESFYNQFSKVRKHLDRFIevdvkkasaaqlsseadklcetvfqlhqsqhqsreekeaqkqclmlsfertaadi 955  Bacillus subtilis
15791778  375 ----TKESLKSRLVDLDENLVEkidflcvsakmasdfykglaskeslqksgmqefenylfnelyagekskialraykkel 450  Campylobacter jejuni
15791779  251 eakdeqsyeksnfqslldfltqldttvlkekfvkrkilnlceiledenqlfvgifdrllnqfqsyekhlllayenflkei 330  Campylobacter jejuni
15645579  218 -----KEASKESLKHAKHILWLISCESg----------EIHEDDLeylqelyeegkqvfivlsradrRTKRQ-----LEE 277  Helicobacter pylo...
15645582  400 -----EHGIELGINALSVIFSKN--------------------------------------------PVTRP-----FAL 425  Helicobacter pylo...
17231419  567 --grDVKICLLTIQLIEKSLEKANVSWgewye--gleeRMLLKSErwnseyklfwkqdklvrdyiqcFVSDL-----SDE 637  Nostoc sp. PCC 7120
17231906  470 ----AFKELSRSAFQYGASYSQVTDQIteklt--gqkvTVNPTTTte-------------------dDKSPS-----WAK 519  Nostoc sp. PCC 7120
15611963      --------------------------------------------------------------------------------      Helicobacter pylo...
15611964  211 -----KEASKESLKHAKHIKR----------------------------------------------------------- 226  Helicobacter pylo...
15614263  787 GVNSIHGRHTNVAFTQLKESDAIFYLtyynhsfskadqyflqqmaKVNEAFHDdklyfVINAADLAASAeelagvvshvk 866  Bacillus halodurans
1730891   956 ekrrnsktiiekvkkdtreqlyhiaqrlsyfandllksafhpglqngdwkknvskamttalheylfeyiqeiktldvrms 1035 Bacillus subtilis
15791778  451 hlelknilseyemqnrlikenkqgvseenqklllelqkqntllkeaqdeisnsiaklknidsgidnlvlllakklkerli 530  Campylobacter jejuni
15791779  331 eilnhqileqlksiserisseifasvkekdayfykeskgflkkdlytrydykapyissddaflamfynsdvmskefkkik 410  Campylobacter jejuni
15645579  278 VVIKIKETLKDNGIEFLGIGAYSSTRyqeykefsekskvfnsleeFLMKLNQR-----SEKQNEILG-Yl---------- 341  Helicobacter pylo...
15645582  426 ILQGLKSLLKDLLTLLPNIIASf----------------------FRNEEKER-----AKLENLIEVRVi---------- 468  Helicobacter pylo...
17231419  638 IDDWVNSQLKNIILEENLQNLNRNIKyeldaiqaefnlldmrdntKFSEKLKLsineiSDQLIELDNIDfstp------- 710  Nostoc sp. PCC 7120
17231906  520 WAMGLLSLSRGNLAGVALAGAGFDWKnillny--------ftvvgIGGIITAVtgvflGPIGFALLGLG----------- 580  Nostoc sp. PCC 7120
15611963      --------------------------------------------------------------------------------      Helicobacter pylo...
15611964      --------------------------------------------------------------------------------      Helicobacter pylo...
15614263  867 qqlkanhmesprlfyvsskqALAAKTTGETSNEdASSFHQFEtmfyQQMINQLkRISAQRIVEEAARFCAKLGdtlaflQ 946  Bacillus halodurans
1730891  1036 gfierhineewldhfqktlnedgyfsvyagdqhsngiqlkevepeieerafeqelkeikspkqffeqkgkatfieavrmk 1115 Bacillus subtilis
15791778  531 defkylknnaqklnlsrilnivdittkdgindilreikfenikkieelktnlslkydflkddfdngfegfkdgisknids 610  Campylobacter jejuni
15791779  411 nelyksfeeikmklkdfinilereillfkaefsniqkdhifqsdknfselrafcnasdeyflkdfkellfksileldlff 490  Campylobacter jejuni
15645579  342 -------------------yEVHSMYEKAIEQD-ANQFKRYQ----SELHSVR-LDLMQKGFDDFSDKIFRRI------E 390  Helicobacter pylo...
15645582  469 -------------------pEIQYKLKKVLPGL-FN-------------------EALQNSLKSLKDRCELEI------T 503  Helicobacter pylo...
17231419  711 ----------------lkgeLMEFTRIGFIPTA-LANVSAVIgnsfASMMMDS-DKFHSEIKLSVLEIGLEKFd-----E 767  Nostoc sp. PCC 7120
17231906  581 --------------------VGFLQADQARKEL-VKTAKKELvkylPQVAHEQsQTVYDAVKECFDAYEREVSk-----R 634  Nostoc sp. PCC 7120
15611963      --------------------------------------------------------------------------------      Helicobacter pylo...
15611964      --------------------------------------------------------------------------------      Helicobacter pylo...
15614263  947 KEEGERKTRRQEVQQIVEMLRDELLTLVptqslreseQEVAELFLYLRQRLRYVLADEFsQFVN 1010 Bacillus halodurans
1730891  1116 ltkiteawikneeeslishytahlrrlqedmgekaiaqitdqketylrgyaegehakeiemayq 1179 Bacillus subtilis
15791778  611 ifqsekfallrlkieklsnlksdlyeletnldtvifdtfkefkmseilnslningaffeflndk 674  Campylobacter jejuni
15791779  491 eklnlkaftnyenatklslaffsrkinesrvlyeldssefvlfypkkseiyervlnelnvyefe 554  Campylobacter jejuni
15645579  391 NLEKEFSEQERSKRESLARLNEVIDLFK---------EGIDKVFDRVSAFTWEKYKEQN-DDEE 444  Helicobacter pylori 26695
15645582  504 HKKQEIALAQKEKEKHLNDLEDQKQILE---------NKINALSDLEQQYLKDQQ--------- 549  Helicobacter pylori 26695
17231419  768 SFDKVYEKIQENIEIFFDTKVESVSRVI---------EGAIYMYEKLLEQQEKSNQAMLeQHYA 822  Nostoc sp. PCC 7120
17231906  635 INDDITARKSELDNLLKQKETREINREG---------ELKRFKSLQEDVIAQLQNIEAAySNLL 689  Nostoc sp. PCC 7120
15611963      ----------------------------------------------------------------      Helicobacter pylori J99
15611964      ----------------------------------------------------------------      Helicobacter pylori J99
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