Conserved Protein Domain Family
Tar

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COG0840: Tar (this model, PSSM-Id:223910 is obsolete and has been replaced by 440602)
Methyl-accepting chemotaxis protein [Cell motility, Signal transduction mechanisms]
Statistics
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PSSM-Id: 223910
Aligned: 323 rows
Threshold Bit Score: 41.1296
Created: 7-Oct-2002
Updated: 23-Jan-2015
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
17228422 472 EELFSITGsQEavpifs---------------qadvpkVEANvNVEQGwlaplenasldtkpwlvggvvgvfsalvvatv 536  Nostoc sp. PCC 7120
15594941 148 SILHNSLAkINnnfyipiaykitdskksnvgyiilyadISEKiAELKEylllllenslleq---------nastenssky 218  Lyme disease spiro...
15594942 151 SNSNFSSLgLKdvrldpiysvpveknskyysrymqidgKIYSiISFPVrdsvstlgvigi----------licfdesldi 220  Lyme disease spiro...
15893672     --------------------------------------------------------------------------------      Clostridium acetob...
15894028     --------------------------------------------------------------------------------      Clostridium acetob...
15894879     --------------------------------------------------------------------------------      Clostridium acetob...
15896781     --------------------------------------------------------------------------------      Clostridium acetob...
15639479 300 ITFSIPVYdEDrrviavlvadviwtwlcditgdfsvggVGRIaVIDEVgtvvahprhe--------------vvaqqtny 365  Treponema pallidum
15639626 143 SCFVPFVSiLArspf-------------------etgpQMAVyVMLSAggcl--------------------------lf 177  Treponema pallidum
15639627 121 LLLSYYLSsVGaal----------------------clIPFFhHPFFYtl------------------------------ 148  Treponema pallidum
17228422 537 sfTATNIAPPqqresl---------rytswaMSLAAGMTGFAAAAFMGSVTIKQVRRTTKDLQAqfda------vrqGSL 601  Nostoc sp. PCC 7120
15594941 219 fnVYIINSSGdafggkdeilknikhifgfnpKTLTEILNTLSQGKANYNTSNSNEIISLARITTsnw--------ylGIK 290  Lyme disease spiro...
15594942 221 ieNQLYSSLKfgsknynffmldrnympifsnLNNLQAKSFSTAYSENFLSKVIAYAKKDSSSSQytfnyerdfyslnFVK 300  Lyme disease spiro...
15893672     --------------------------------------------------------------------------------      Clostridium acetob...
15894028     --------------------------------------------------------------------------------      Clostridium acetob...
15894879     --------------------------------------------------------------------------------      Clostridium acetob...
15896781     --------------------------------------------------------------------------------      Clostridium acetob...
15639479 366 irLAKEDPATyasvaefvekviksdstashvFSYEGLEKIGSSAKMKSTGWTVVVFVPVSEFMGp------------VYT 433  Treponema pallidum
15639626 178 apALHFLLTRplerwaaflplressvranwtRMLLTIAIALFVATLLLVSAPLLVRTDSQNITP-------------AEL 244  Treponema pallidum
15639627 149 qeWAHFIPLRetrl-------------gyysLSREISVVLVSGLFSMFCVGFSSLLLPLHGEQE-------------LAH 202  Treponema pallidum
17228422 602 NVqatvysndelgqlsagfnemarviftTTNEAQRKADEQEEAKENLQRQVIRLLDDVEG--AA--RGDLTVQAEVt--- 674  Nostoc sp. PCC 7120
15594941 291 IDynnifske----------fknmrlvsLSIIFILVIIFILIMISTIKTLIISKIDKLNVviPKvkNGDLTFKIEsk--- 357  Lyme disease spiro...
15594942 301 TDdfltq-----------------glilNVNSIPIMFKSNWVIFVAFLLLSFAIIFYLCNtfVFslINDFNRIVDYqksk 363  Lyme disease spiro...
15893672   1 ---------------------------mKKRGEFIMENSNEVILNLMKTIAENMPVVFDNkaCIl-VTDKEKYIKvv--- 49   Clostridium acetob...
15894028   1 ---------------------------mEKDIMQSFKDVLPVLSELIQEDVATTIVNKDK--IAv-AVYHNNKIPis--- 47   Clostridium acetob...
15894879   1 --------------------------------MINQNVSPEKLAEAFSIVMPYLEVFFDKelAVa-VADKEKYIDvf--- 44   Clostridium acetob...
15896781   1 ----------------------------MEKIFESLIDAAPTIAEAFGGRAAVTIWDRDKcvYAl-DSNKKal------- 44   Clostridium acetob...
15639479 434 LQnyl--------------------lavGIIVVLFSLIVVYAVARKIVRPLRSTVRVLED--IAygEGDLTVRLPvv--- 488  Treponema pallidum
15639626 245 LTmag---------------------tfGLCASAVSCMEFLLCAYLTSREITRLRVLAEC--IG--TGDYTCADVPre-- 297  Treponema pallidum
15639627 203 VVit-----------------------hNLPCASLICVLSVIVMIRIGRHLDLANQGILTfiQNrlSGDASAASMRvv-- 257  Treponema pallidum
17228422 675 -----ADVLGAVA--DAFNLTIQN----LRDIVQQVKVAAKEVTK--------------GATNSETFARALSSDALRQ-- 727  Nostoc sp. PCC 7120
15594941 358 ----gKDSISSTIn--LFGHFIEN----LKNVINSLQERVKLLKEngdhlfseinkthnTIKNSNQYIEKTQEEVEKQve 427  Lyme disease spiro...
15594942 364 sdpfsLESPLEVKysSSIISYISSkldnLSSKSNESFEKIKFYSEdlneyleqietaisNTESIDSSILVYEQLRDTFsr 443  Lyme disease spiro...
15893672  50 ----kSSGLSLNV--NEGEPITND----LKQIINSGTPTTKDINE--------------SSLKIPIRRYTLPIKNGHGef 105  Clostridium acetob...
15894028  48 ---fnTGDLVPND--NPLCIAMEK----NRVISAVVPKEVYGVS----------------FKAIAYPINDSNGRVVG--- 99   Clostridium acetob...
15894879  45 ----cTDKMP-IR--TNANESIPK----GGAVYDSLNSGENIIKKv-------------PKEVYGIYFKSYAIPIKDE-- 98   Clostridium acetob...
15896781  45 ----aAKAGDKFD--VDFIKNVG-----AYDIVFNKKKTYTTIFNr-------------EEHGEDLRVTMIPAINENKe- 99   Clostridium acetob...
15639479 489 ----gGDEVSLLC--QYFNQTMEK----IRFAIATVGSSSDDMRRigdelasnmtetasAVNEITANIDGVKHRVDLQvs 558  Treponema pallidum
15639626 298 ----tRTSIGLLA--RSLSSLRDKdrafFSRFLQLTQSSSAIAHTaetdiahleeaartTKEEIDHVNENVTAQTATIss 371  Treponema pallidum
15639627 258 ----rRNEFGFLT--QSLNKMHKS----TRFFLIASRGKMARARKiansfvrnartscaAINEIISQAHKAEDKIKHQsr 327  Treponema pallidum
17228422 728 -----AEELGVTLNSVQVMTDSIQ-------RVA---EAAREAEK----VARDASTIALKGGEAVENTVAGILEIRETVA 788  Nostoc sp. PCC 7120
15594941 428 fisntTNIIESLSKNISSLDNSIEtq---aaSVEqssSAIEEMIG----GIQSITEITQKAAKSTEELKRFSDDGRKKQE 500  Lyme disease spiro...
15594942 444 ----fEKSIVDILKGFESIADPINdhnkyisEISsnfEESVSFFYsidkNLEIFNKVATINSTDIENIKSKVFDLNIVFE 519  Lyme disease spiro...
15893672 106 ---igSISISKSIDAKNKLLDLSS-------DLA---DTISNVSA----AVEESTANIQTLSENNKDILVNVHKAI---- 164  Clostridium acetob...
15894028 100 -----AIGVGKSLENKIKIEGIAE-------NLF---SSLSQING----AIDEIAQGSQRLSSVIVDVLSEANVTN---- 156  Clostridium acetob...
15894879  99 -----SGEVKGIVVGGKSLEKSIKl-----yDLS---KNIAEGMS----QIASVIENLTLGVQELVRLNENTNNIVN--- 158  Clostridium acetob...
15896781 100 -----VVGLVSVSMDLENAVSVKNst----lELK---SSLEQTNL----TISEITNSAVLLSEKLNRIIENTDVTK---- 159  Clostridium acetob...
15639479 559 gvseaTDTVERIIKTIKGLNSSIEtq---avNVAqssSSVEQMVA----NIVSITQTLERSDEAVHSLAIATADGRDTLV 631  Treponema pallidum
15639626 372 ----sKEIVGTMVEGVGRLNASVEae---seTVTrsiTLVEQMVE----KIHSIEKIIESNDARVGRLREETNRAGNLTN 440  Treponema pallidum
15639627 328 tifetQKHVQHIVGNIDRFNGHIG-------EQVdtvTDAASSVEqmvrNIESVTQVLSDNSNVIETLLLEAKLAQDATI 400  Treponema pallidum
17228422 789 EttrKVKRLAESSQEISKIVALISQIASRTNLLALNASIEAARAGEAGRGFAIVADEVRQLADKSAKSLKEIEQIVMQIQ 868  Nostoc sp. PCC 7120
15594941 501 EvitQIKEIFKNSTRLQEANSLISSIASQTNLLSMNAAIEASHAGEAGKGFAIVAEEIKDLAEQVTSQSESVASSINEIM 580  Lyme disease spiro...
15594942 520 NvnkNFADLLSQTNSLQSVNKLLVSISAQTNMLAMNAAIEAAKAGDAGKSFAVVAEEIRKLAINSGKYSKTIKDELKTVD 599  Lyme disease spiro...
15893672 165 ----------EHTKNSGSVLKFVQGVAKETNLLGINAAIEAARAGEAGKGFSVVAQHIRKLSNSTSDSIKEINEVL---- 230  Clostridium acetob...
15894028 157 ----------NKINETDSTIGAIKNIASQSNLLALNAAIEAARAGESGKGFSVVAQEMRKLSQNSSESAKKVSEML---- 222  Clostridium acetob...
15894879 159 -------SAIETTRNTDDILGFVQSISKQTNLLGINAAIESARAGEIGKGFSVVAQEIRKLSNSSSESIGKVDSVL---- 227  Clostridium acetob...
15896781 160 ----------KLIGESNEAVALIGSIAKQSNLLGLNAAIESSKAGEFGKGFSVVAGEMRKLASNSGESSRRILSAL---- 225  Clostridium acetob...
15639479 632 SssgITQKISEESGSLLEASSVIQHIASQTNLLAMNAAIEAAHAGEAGKGFAVVADEIRKLAEESSTQGKTITETLKTLS 711  Treponema pallidum
15639626 441 RsleLTQNISKSSKALLQASLVIRKIASQTTLLAMNAAIEAAHAGQDGRGFAVVADEIRKLAEESNEQGKIISSVLVQLT 520  Treponema pallidum
15639627 401 QsadVGREVLHASEALAEAGAVIQHIASQTNLLAMNASIEATYCKESGQGFEVVASEIRRLAEDASKQGKHISAVLRDVK 480  Treponema pallidum
17228422 869 SETGSVMTAM-------EEGTQQVIKGTK--------LAEEAKRS-------LENIIQVANRIDILVRS---IT---SDT 920  Nostoc sp. PCC 7120
15594941 581 DSITKTVNTSel----tNKAFNQIFDSIN--------LVVQVIEEin---htMQEQSIGSQEILKALNTmreIT---YEV 642  Lyme disease spiro...
15594942 600 SIIAVINSEIdtiyknfIDIQDNVDNNFSrh-----eKVDLTLAKh------FKEIGEFKERYLSHDTK---IRdakNMY 665  Lyme disease spiro...
15893672 231 ---------------------------------------KNIEES-------VQQIADKIRNSNESFDT---QA---AAL 258  Clostridium acetob...
15894028 223 ---------------------------------------LEMRNS-------IQSIISQINEVNVVAEG---HA---AAT 250  Clostridium acetob...
15894879 228 -----------------------------------------------------KEITKAINNIYDDTKN---TR---GAF 248  Clostridium acetob...
15896781 226 ---------------------------------------DQMSNN-------IKVIIDTINELGEIATN---QA---ASL 253  Clostridium acetob...
15639479 712 VEIDTLSTSS-------KAVEEQFDTIFR--------LSDQVRTMsrslteaMKEQSDGSREVLAAIKS---INaatVDV 773  Treponema pallidum
15639626 521 EKIEHIAQQAeslskqfSNLFVLAEEVKQ--------RESTVMHAmeeqssgGEYIRRSMEAITGNRRR---IRggiSLM 589  Treponema pallidum
15639627 481 TEIEKVSESAlavqaqfALIFSITTDIKAqeevisqsMVEQTKDSv-----hVLHAIQHITEITRTLQE---NS---GAI 549  Treponema pallidum
17228422 921 VEQT----ETSRAVAQVMQSVELTAQETS----QEAQRVSGAL--------QNLVGVS-------RDLISSVERFRV 974  Nostoc sp. PCC 7120
15594941 643 KIGSndmfRGNKEIISTIKLLGEINITVSnsmkGLKEEINTLVeaierikvLGTTNSSh-----iSGISESINQFKT 714  Lyme disease spirochete
15594942 666 KEIFnnhyFISGKFNNFSQDLKEFKVSKMn--lDAVSSLQEYS--------SLVKSSKdk----iLKTKELIQKIND 728  Lyme disease spirochete
15893672 259 EEIS----ASVQEVNNNAKTVEETARTL------------------------------------------------- 282  Clostridium acetobuty...
15894028 251 EEIN----ATIDEITTASQTLVEESKNI------------------------------------------------- 274  Clostridium acetobuty...
15894879 249 DEQV----SAFEQVNASIQELNSTSQILR----DLAENL-------------------------------------- 279  Clostridium acetobuty...
15896781 254 EEVS----ATVEQISANSQILVDNMDMN------------------------------------------------- 277  Clostridium acetobuty...
15639479 774 KEGSadmlKGGEVIAREMQRLDDLTSEIAr---SMNEMAAGAIein--navHEVNEITqrskqsiSSLADEVEKFKV 845  Treponema pallidum
15639626 590 LKDGelvlKDMNELAHNTGGITVAMHDMA----ASTSRILDAVts-----vKIIASENkn---amDMLTNQLTQLRL 654  Treponema pallidum
15639627 550 LDNSkhveEAMLALSRITSEIDSSVSSMH----KNSEQVKKYAss-----iTEIGQKNk------DSITDLVTELSN 611  Treponema pallidum
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