Conserved Protein Domain Family
Gem1

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COG1100: Gem1 (this model, PSSM-Id:224025 is obsolete and has been replaced by 440717)
GTPase SAR1 family domain [General function prediction only]
Statistics
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PSSM-Id: 224025
Aligned: 114 rows
Threshold Bit Score: 52.2703
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
731284     1 MTKET---IRVVICGDEGVGKSSLIVSLTKAEFIPTIQDVLPPISIPRDFSSSPtyspKN-TVLIDT-SDSD-LIALDHE 74  baker's yeast
3123259    4 TYLRE---YKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYRKKCEIDg----eGAlLDVLDTaGQEEySAMREQY 76  fission yeast
19114543   2 TTELR---RKLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDg----rHIeLALWDTaGQEDyDRLRPLS 74  fission yeast
19114092  12 KKPIY---RKIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIHDIFVDg----nSIeLSLWDTaGQEEyDQLRSLS 84  fission yeast
9297040    1 --MAPiksRRIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTFSKNIKYKGQ----EFaTEIIDTaGQDEySILNSKH 74  fission yeast
134042     1 --MRD---YKLVVLGAGGVGKSCLTVQFVQGVYLDTYDPTIEDSYRKTIEIDNk----VFdLEILDTaGIAQfTAMRELY 71  baker's yeast
730509    12 NKPIE---RKIVILGDGACGKTSLLNVFTRGYFPEVYEPTVFENYIHDIFVDs----kHItLSLWDTaGQEEfDRLRSLS 84  baker's yeast
1710014    6 SNIRE---YKLVVVGGGGVGKSALTIQLTQSHFVDEYDPTIEDSYRKQVVIDd----eVSiLDILDTaGQEEySAMREQY 78  baker's yeast
1710013    6 STIRE---YKIVVVGGGGVGKSALTIQFIQSYFVDEYDPTIEDSYRKQVVIDd----kVSiLDILDTaGQEEySAMREQY 78  baker's yeast
132536     6 GNSIR---RKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDg----rRVeLALWDTaGQEDyDRLRPLS 78  baker's yeast
731284    75 LKSADVIWLVYCDH--ESYDHVSLFWLPHFRSLG--LNIPVILCKNKCDSISNVNANAMVVSENsd-------------- 136 baker's yeast
3123259   77 MRTGEGFLLVYNITsrSSFDEISTFYQQILRVKDk-DTFPVVLVANKCDLEAERVVSRAEGEQlak-------------- 141 fission yeast
19114543  75 YPDSHVVLICFSVDapESLDNVQEKWISEVLHFC--SNLPILLVGCKVDLRNDPKTIEELSKT----------------- 135 fission yeast
19114092  85 YSDTHVIMICFAVDsrDSLENVITKWLPEVSSNC--PGVKLVLVALKCDLRGADEEqvd--------------------- 141 fission yeast
9297040   75 SIGIHGYVLVYSITs-KSSFEMVKIVRDKILNHTgtEWVPIVVVGNKSDLHMQR-------------------------- 127 fission yeast
134042    72 IKSGMGFLLVYSVTdrQSLEELMELREQVLRIKDs-DRVPMVLIGNKADLINERVISVEEGIEVsskwgrvp----fyet 146 baker's yeast
730509    85 YSDTQCIMLCFSIDsrDSLENVQNKWVGEITDHC--EGVKLVLVALKCDLRNNENESNAITPNNiqqdnsvsndngnnin 162 baker's yeast
1710014   79 MRNGEGFLLVYSITskSSLDELMTYYQQILRVKDt-DYVPIVVVGNKSDLENEKQVSYQDGLNmak-------------- 143 baker's yeast
1710013   79 MRTGEGFLLVYSVTsrNSFDELLSYYQQIQRVKDs-DYIPVVVVGNKLDLENERQVSYEDGLRlak-------------- 143 baker's yeast
132536    79 YPDSNVVLICFSIDlpDSLENVQEKWIAEVLHFC--QGVPIILVGCKVDLRNDPQTIEQLRQE----------------- 139 baker's yeast
731284   137 --ddIDTKVEDEEFIPILMEFKEIDtCIKTSAK--------------------TQFDLNQAFYLCQRAITHPISPLFDAM 194 baker's yeast
3123259  142 --smHCLYVETSAKLRLNVEEAFYS-LVRTIR------------------------RYNKSEEKGFQNKQAVQTAQVP-A 193 fission yeast
19114543 136 ----SQKPITFEEGQVVAQKIGAYK-YLECSAK--------------------LNEGVNEVFETAARASML---KFKPAS 187 fission yeast
19114092 142 ----hskIIDYEEGLAAAKKINAVR-YLECSAK--------------------LNRGVNEAFTEAARVALAAQPRGTKDG 196 fission yeast
9297040  128 ------AVTAEEGKALANEWKCAWT---EASAR--------------------HNENVARAFELIISEIEKQANPSPPGD 178 fission yeast
134042   147 sallRSNVDEVFVDLVRQIIRNEMEsVAVKDARnqsqqfskiespstrlpssaKQDTKQSNNKQSSKGLYNKSSQGQAKV 226 baker's yeast
730509   163 stsnGKNLISYEEGLAMAKKIGALR-YLECSAK--------------------LNKGVNEAFTEAARVALTAGPVATEVK 221 baker's yeast
1710014  144 --qmNAPFLETSAKQAINVEEAFYT-LARLVRD--------------------EGGKYNKTLTENDNSKQTSQDTKGSGA 200 baker's yeast
1710013  144 --qlNAPFLETSAKQAINVDEAFYS-LIRLVRD--------------------DGGKYNSMNRQLDNTN-EIRDSELTSS 199 baker's yeast
132536   140 ----GQQPVTSQEGQSVADQIGATG-YYECSAK--------------------TGYGVREVFEAATRASLMGKSKTNGKA 194 baker's yeast
731284   195 VGELKPla----vmALKrifllsdLNQdSYlddnEILgLQKKCFN 235 baker's yeast
3123259  194 STAKRA----------------------Sa----VNNsKTEDEVS 212 fission yeast
19114543 188 VP--KT----------------------K---------KKKHCIL 199 fission yeast
19114092 197 ADES----------------------------------HGTGCII 207 fission yeast
9297040  179 GKGCVIa-------------------------------------- 185 fission yeast
134042   227 KQSTPVnekhkpshAVPksgssnrTGIsATsqqkKKKkNASTCTI 271 baker's yeast
730509   222 SDS------------------------------------GSSCTI 230 baker's yeast
1710014  201 NSVPRN----------------------SGghrkMSNaANGKNVN 223 baker's yeast
1710013  200 ATADRE----------------------Kk----NNGsYVLDNSL 218 baker's yeast
132536   195 KKNTTE----------------------K---------KKKKCVL 208 baker's yeast
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