Conserved Protein Domain Family
Ndh

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COG1252: Ndh (this model, PSSM-Id:224172 is obsolete and has been replaced by 440864)
NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]
Statistics
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PSSM-Id: 224172
Aligned: 55 rows
Threshold Bit Score: 290.305
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
15672811   1 MTKKQIVVIGGGVAGVHATRELSKKLkA--DADITLIDKHSYHTTMTQLHEVAAGRVPFTTVQYDFQKLLGKRKNVSLVT 78  Lactococcus lactis ...
15841282   1 -----MVVIGSGFAGLWAALGAARr-lDelAVPAGTVDVMVVSNKPFHDIRVRNYEADLSACRIPLGDVLGPAG-VAHVT 73  Mycobacterium tuber...
15597887   1 -MKQRILIVGAGFAGMWSALSAVRq-lDrqGR--DDVEVAVLAPQPELRIRPRFYEPDVQRMAAPLGELFAAVG-VRFVQ 75  Pseudomonas aerugin...
17546948   8 AGGPRIVVVGGGAGGLELATRLGDKLgKrrAARVVLVDRNPTHIWKPLLHEVAAGSMDPNTHQLEYAAQAR-WHGFEFQQ 86  Ralstonia solanacearum
15608949   1 --MTRVVVIGSGFAGLWAALGAARr-lDelAVLAGTVDVMVVSNKPFHDIRVRNYEADLSACRIPLGDVLGPAG-VAHVT 76  Mycobacterium tuber...
16264903   1 ---MRLVIVGAGFAGMYAALSAARl-rDieGVSPEELEIALVSPEPTLVIRPRLYEPSPETLTAPLQNVFDAVD-VAYVQ 75  Sinorhizobium meliloti
15897884   1 ----MILILGGGFAGVSAYNQNKENS--------LVVDRKDYFLLTPWIIDFICGMKKLEDIIVKYKKVIL--------G 60  Sulfolobus solfatar...
15899669   1 ---MRVVIVGGGFAGIAAKSKYPN---------AILIDRSEYFLMTPKIVHTLADG--ESALVYRKPDIVA--------- 57  Sulfolobus solfatar...
15899854   1 MQGERVVILGGGFAGIAAKLVYPN---------AILVDEKDFMVVTPRLVEVIEKNLPLSYALIHRKVDVK--------- 62  Sulfolobus solfatar...
17230799   7 PLTHNLVLVGGGHTHAIVLRMFGMKPl--sGVRLTLITPDVETPYSGMLPGHISGVYNRDECHINLQRLANFAQ-AQLSI 83  Nostoc sp. PCC 7120
15672811  79 DSVVSLDKENKQVITKh------------GRYSYDYVIVALGGEPNDFGVPGVKEHGFTLWSLEDAMRIKRHLEKIVQYA 146 Lactococcus lactis ...
15841282  74 AEVTAIDADGRRVTTSt-----------gASYSYDRLVLASGSHVVKPALPGLAEFGFDVDTYDGAVRLQQHLQ---GLA 139 Mycobacterium tuber...
15597887  76 GSAQRIDVAGKRVEYRdae-------gtlAQLDYDRLVLAAGSGVWRPASVAGIDAAFDVDQLEDALRLEAHLH---ALR 145 Pseudomonas aerugin...
17546948  87 GELKGLDRAAKTITVSgcvdadgtevlpeRAIAYDMLVLAIGSVTHFFGVPGTAEHAIALDAASQAERFRRKLISACMRA 166 Ralstonia solanacearum
15608949  77 AEVTAIDADGRRVTTSt-----------gASYSYDRLVLASGSHVVKPALPGLAEFGFDVDTYDGAVRLQQHLQ---GLA 142 Mycobacterium tuber...
16264903  76 GSVEAVDTKAGTVEVVnae-------gerKTLQYHRLVLATGSRLFRPNISGLAEYAFSIDNVDDAIALDRHLH---ELA 145 Sinorhizobium meliloti
15897884  61 N-VQKIDFKNKKVILDn-----------sKELTYDKLIVSLGHHQNLPRLKGAKEYAHKIETLEDAIELKRRLN------ 122 Sulfolobus solfatar...
15899669  58 -EVVNIKFNEKKIITNk------------gEISYDKLIISLGYSQDLSKIKGANEHVMKLESFEDAIKMHNEI----EKA 120 Sulfolobus solfatar...
15899854  63 AKILKVDFKEKKVITTn------------gEIKFDKLIIALGYEQDLSKIKG-AENYGIGFTLENIEKIKS-----FKEG 124 Sulfolobus solfatar...
17230799  84 DTVVDLDVKNHKVICAs-----------hQAVDFDLLSIDIGSTPATISVSGAAEYAVPAKPVSQLLEHWYQML---DSV 149 Nostoc sp. PCC 7120
15672811 147 STEVDDekrRALLTISVAGSGFTGIEMAGELIDWRKKVSTD--WKIPEE-EITINVVEMMPTILNTLDRKQADKAHAYLE 223 Lactococcus lactis ...
15841282 140 GGPLTS----AAATVVVVGAGLTGIETACELPGRLHALFARg-DGVTP----RVVLIDHNPFVGSDMGLSARPVIEQALL 210 Mycobacterium tuber...
15597887 146 DLPDSP----ARNTVVVAGGGFTGIETATEMPARLRAILG---EKAAL----RVIVVDRGAAIGASMGADLSGLIAEASA 214 Pseudomonas aerugin...
17546948 167 QNGVGDa--RAQVDIAIVGAGATGVELSAELRNTAHVLAAYglHKLDPLrDIRIHLIEGSPRILAALSERVSTETTKLLQ 244 Ralstonia solanacearum
15608949 143 GGPLTS----AAATVVVVGAGLTGIETACELPGRLHALFARg-DGVTP----RVVLIDHNPFVGSDMGLSARPVIEQALL 213 Mycobacterium tuber...
16264903 146 KMPASA----ARDTIVVAGAGFTGIEAATEMPSRLRTLFD---KTANP----RVIIIDRSSAVAPDMGEGARPIIEDALR 214 Sinorhizobium meliloti
15897884 123 ----------EVKDITIIGGGATGVELAGNIKGKKIT------------------LVQRRNRLLPTMSTASSKKAEDLLR 174 Sulfolobus solfatar...
15899669 121 R------------TLIVIGGGDLGVEVVGSTIELVSKIKRK-----GKE---RVILINRGARILPHMPPQISLKAENILA 180 Sulfolobus solfatar...
15899854 125 S------------VVTILGGGALGVELAGALRKRGH----------------IVNLVEAESRLLPYLVSDFSREVQRVLE 176 Sulfolobus solfatar...
17230799 150 VQKPQ-----IKRSIAIAGGGAGGVELALSMQAHLHRILKQ---AQQPLsNLEIHLFHRQAQLMSHHHPSVQHQVKQILT 221 Nostoc sp. PCC 7120
15672811 224 KKNVHVLTNHGIVEVAKDHIKVNVGGRdeek-vakELPTHTLIWTTGVQGNTAAKT-DL-NETERGHRLQANEYMQAVGF 300 Lactococcus lactis ...
15841282 211 DNGVETRTGVSVAAVSPGGVTLSSGE---------RLAAATVVWCAGMRASRLTEQl-PvAR-DRLGRLQVDDYLRVIGV 279 Mycobacterium tuber...
15597887 215 ELGVEWCLGRSVAAVDAEGVTLDDGQ---------RIEAKTVVWTVGVRASTLTGQi-PgER-DAQGRLHVDRNLKVLGL 283 Pseudomonas aerugin...
17546948 245 KLNVEVITGERVNQVTDSAVKTASGKS---------IPADLTVWAAGIRAPAILGElG--LPVNKLGQVVVSRTLQAEGD 313 Ralstonia solanacearum
15608949 214 DNGVETRTGVSVAAVSPGGVTLSSGE---------RLAAATVVWCAGMRASRLTEQl-PvAR-DRLGRLQVDDYLRVIGV 282 Mycobacterium tuber...
16264903 215 RLGVETRLNAGVSSLDKSGVTLSTGE---------HIETMTVIWAAGMRANPVTTKi-PgER-DKFDRLLVDGCLRVPSV 283 Sinorhizobium meliloti
15897884 175 ELGVNLMLGVEAIEIKKDSVVTSYG----------EIKTELTIFAGGLKGPQIVGN----LHANKNHRLLVDKNLKSIEY 240 Sulfolobus solfatar...
15899669 181 ELGVEVILDASVEEIRGKTVITSKGE----------FSGDHIFYAGGIKGSNFLTNl---KLSLKDGKINVNEDLSSVDY 247 Sulfolobus solfatar...
15899854 177 NQGVNVILSAKVEEVNQNEVVTTQGR----------IRSDYVIFSAGFSGPKIIKEm---ALSNKNNRMLVDRYLRSIDY 243 Sulfolobus solfatar...
17230799 222 RRGVKLHLRETVSHIAPSTDNQDEELLeiqcesgiKVNCHQIFWVTQASAPQWLKA-TG-LATDERGFILVEDTLQSPTH 299 Nostoc sp. PCC 7120
15672811 301 EGkgIYVAGDVSGYIEPdtgRPTPQIVEAAEQTAHTAAANILADINGGSKHKHESKY-QGTMVSIGSTWGVAKI-GS--- 375 Lactococcus lactis ...
15841282 280 PA--MFAAGDVAAARMDd-eHLSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPW-YVTVLDLGSAGAVYTE-GWerk 354 Mycobacterium tuber...
15597887 284 DD--VYATGDVARAATDdlgNHALMTCQHAIALGRSAGNNVAADLLGVEPIPYSQVK-YVTCLDLGGWGAVFTE-GWdrq 359 Pseudomonas aerugin...
17546948 314 DA--IYAFGDCASCPWPeasASVPPRAQAAHQQATYLYKALCRRLEGKPVEPFGFKD-LGSLVSLGHFSAVGSL-MG--- 386 Ralstonia solanacearum
15608949 283 PA--MFAAGDVAAARMDd-eHLSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPW-YVTVLDLGSAGAVYTE-GWerk 357 Mycobacterium tuber...
16264903 284 PG--VFATGDAARAACDdcgNYALMSCQHATRMGAFAGNNAAAELLGVPPRQYHQKA-YVTCLDLGDAGALFTR-GWdre 359 Sinorhizobium meliloti
15897884 241 ND--VYGAGDCVTFEDK---E-IPMTADIAVAAGRVVMKNILGNEIE--FKPKRLAT--TIRIRNEFFGDFGEN------ 304 Sulfolobus solfatar...
15899669 248 KD--VYGAGVCASTFY-------PSNAEISMQSG---VHAILNAIEG-RDEKFKPMP-LGDIVDIDNNFMGVFM-G---- 308 Sulfolobus solfatar...
15899854 244 DF--VYGAGDCANFKDG----FIPQSAQVSLQAGEVAMNNAIKDEKV----EFKPVQ-RAIVLKIGEDY-IGLIkN---- 307 Sulfolobus solfatar...
17230799 300 PE--VFASGDIATMINH----PRPKAGVFAVRQGKPLFDNLRRKLTGQALKPYKPQQqYLSLIGTGDKRAIATK-G---- 368 Nostoc sp. PCC 7120
15672811 376 MRLTGFWAMLMKNIVYFIYTLQIRSAHYFWRYALDEVFRVKDNR 419 Lactococcus lactis subsp. lactis
15841282 355 VVSQGAPAKTTKQSINTRRIYPPLNGSRADLLAAAAPRVQPRP- 397 Mycobacterium tuberculosis CDC1551
15597887 360 VRFVREEGKKIKTEINGVWIYPPA-ADRAVALAAADPLIPVVA- 401 Pseudomonas aeruginosa PA01
17546948 387 GLIGGTMFIEGMMARLMYTSLYRMHVMALHGFVRMALDTVTHWL 430 Ralstonia solanacearum
15608949 358 VVSQGAPAKTTKQSINTRRIYPPLNGSRADLLAAAAPRVQPRP- 400 Mycobacterium tuberculosis H37Rv
16264903 360 VEMVGEKAKATKQEINTVWIYPPK-PERAAALASADPERVTDL- 401 Sinorhizobium meliloti
15897884 305 -YVEGKFAKILKDISYLESLLLPRRLRE---------------- 331 Sulfolobus solfataricus
15899669 309 LPVRGNFAKLLKRIALAKVYYTINKVNFYNKNLKI--------- 343 Sulfolobus solfataricus
15899854 308 TVISGPIASFIKSFAISSLEGKVKKVNRLILAVFTRGVTSAYF- 350 Sulfolobus solfataricus
17230799 369 -CITLPPHQLCWQ-WKDWLDRRFMQQF----------------- 393 Nostoc sp. PCC 7120
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