Conserved Protein Domain Family
COG1579

?
COG1579: COG1579 (this model, PSSM-Id:224495 is obsolete and has been replaced by 441187)
Predicted nucleic acid-binding protein, contains Zn-ribbon domain [General function prediction only]
Statistics
?
PSSM-Id: 224495
Aligned: 13 rows
Threshold Bit Score: 151.364
Created: 7-Oct-2002
Updated: 23-Jan-2015
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
15639485   2 VPANVFENLRALQ-VVLAQKNRLETEIA--EAPKFLVAQEELLTRCKESFIEKNVEYESVREEVARLTTELCKAEKRRED 78  Treponema pallidum
15595058   1 MMENNIDTLKKLE-VIYKSKFELEERRK--SIPKYLEAKKNQIEELSKVLVDLQQKFKEYQKEDSALKLDIQDINSRKSK 77  Lyme disease spiroc...
15894586   1 -MNNNVELAYLIQeNYDLIKESKKILRDg-SYIYLLKKLKSEFETAKKNYVNRKTELAKIKQSYSAISIELRKEREKMET 78  Clostridium acetobu...
15618436   1 -MHDALLSILAIQ-ELDIKMIRLMRVKK--EHQKELAKVQSLKSDIRRKVQEKELEMENLKTQIRDGENRIQEISEQINK 76  Chlamydophila pneum...
15605123   1 -MHDALQSILAIQ-ELDIKMIRLMRVKK--EHQNELAKIQALKTDIRRKVEEKEQEMEKLKDQIKGGEKRIQEISDQINK 76  Chlamydia trachomatis
19553437   3 LDPSLHKTLLQLAtTLRTQNANSAPKTT--PEQEAVDKAVAELSRNRDAASAAQMAVDDMENEILRIQSDERKLRRRKKD 80  Corynebacterium glu...
15792055   1 -MNKYLEQLVLLS-KIDQEIDSYEPKID--SINKTLKDAELKIEKINADLEKIDEEIKDIENQKIQNNAHISEFSAKIKD 76  Campylobacter jejuni
15805322   3 SELTPLQRLHRIQ-AIDLNLDRLRAEEG--NFPDDLRAARAEQDRLNNDLEDTEITLEGFEKKVRQHELDLASLREQLAR 79  Deinococcus radiodu...
15645574   1 -MNTHLKQLIEIS-HLDKEIDSLEPLIR--EKRKDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNTKIAS 76  Helicobacter pylori...
18202759   1 -----------MS-KLDDELSRIAHRANylPQREAYERMRVERTGANDRLVAVQIALEDVDTQVFLLESEIDAMRQREDR 68  Mycobacterium leprae
1722934    3 AGVAQQRSLLELA-KLDAELTRIAHRAThlPQRAAYQQVQAEHNAANDRMAALRIAAEDLDGQVSRFESEIDAVRKRGDR 81  Mycobacterium tuber...
15606457   1 MTKEEAKLLVKIQ-EIDLETERVNHRLK--KIEEEVKKLKEELEALLKEKETLLKRKEELENLKKQLQEEVKEAEEKLKV 77  Aquifex aeolicus
15611959   1 -MNTHLKQLIEIS-HLDKEIDSLEPLIR--EKRKDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNAKIAS 76  Helicobacter pylori...
15639485  79 AEVAM--DNISTQREYDALDREIQEAKRQEVALRSEVARSDVAYKRLAEEIKLDQEDIVQQERELTENKARVDAEVRGKR 156 Treponema pallidum
15595058  78 AEEKI--DSIKTQREYEALEKELQVIIDDEVTIRKKMTHVNGLKTKIEKEILDVNEKHIKEEECFRAESSSFELELLEIE 155 Lyme disease spiroc...
15894586  79 NEYKLynKAGSNLNMIEKLEGAIEIEKQNLKNLEDEAVDLLDEEEKLKKEIEDLRLKLVNIKDNFYDYKEKSSEKVEKAR 158 Clostridium acetobu...
15618436  77 LENQQ--AAVKKMDEFNALTQEMTTANKERRSLEHQLSDLMDKQAGGEDLIVSLKESLASTENSSSVIEKEIFESIKKIN 154 Chlamydophila pneum...
15605123  77 LENQQ--AAVKKMDEFNALTQEMTAANKERRTLEHQLSDLMDKQAGSEDLLISLKESLSSTENSSSAIEEEIRENIRKIN 154 Chlamydia trachomatis
19553437  81 GQDAL--GAETDEERRRDLNHDVYTAKSRIADLMSELQEAHNEIHALRNNRDLAQSRVKDTERKVADARAAAEAAAAATP 158 Corynebacterium glu...
15792055  77 LSKKS--GVVKTEKEANALKIEEDIAKEQLDAANDEIVRLDKILENKETYKKELEEEKIKQEQNINEIRVSIKSEMEVLE 154 Campylobacter jejuni
15805322  80 AREDQe-KNAFDSRAQSQYGSRIQQLEERAEELEEDLAPLRERVQELSGKASGLRDQHRALRPQLGELEDRDEGRIQGLR 158 Deinococcus radiodu...
15645574  77 IQKKM--SEIKSERELRSLNIEEDIAKERSNQANREIENLQNEIKHKSEKQEDLKKEMLELEKLVQQLESLVENEVKNIK 154 Helicobacter pylori...
18202759  69 DRLLLn-SGATDAKQLSDLQPEFGTWQRRKNSLEDSLREVMKRRGELQDQLTAELGAIERMQTDLVGARQTLDVAFAEID 147 Mycobacterium leprae
1722934   82 DRSLLt-SGATDAKQLADLQHELDSLQRRQASLEDALLEVLERREELQAQQTAESRALQALRADLAAAQQALDEALAEID 160 Mycobacterium tuber...
15606457  78 TEEKL--MKVTRDVEYKALLREKSKLEDKILKKSYEIDQIEEELEKITKEIEEKVPRIERQVKEIEEELKDLELEESIAH 155 Aquifex aeolicus
15611959  77 IQKKM--SEIKSERELRSLNIEEDIAKERSNQANREIENLQNEIKHKSEKQEVLKKEMLELEKLALELENLVENEVKNIK 154 Helicobacter pylori...
15639485 157 EQVLRLQEEERRLSPDLDRDVLFKFERIIKSKQGVGIVPVRGNVCAGCHMILPAQFSTGVRE--GNSIVYCPYCSRILYY 234 Treponema pallidum
15595058 156 KKLLEIESEELNCASKMNEDFLFKFQRIIRNK-SNGVVPLVNNVCKGCHMILPIEFANKVRRe-PNDIKFCPYCSRILYY 233 Lyme disease spiroc...
15894586 159 QEMIAAKTKIEEIKSKIPKELFEEISHLMSKS-SCAVAKLNGEICGGCRMKVSSMTIDDLIN--NNSIVHCDNCGRILYY 235 Clostridium acetobu...
15618436 155 EEGKALLEQRTELKHATNPELLSIYERLLNNKKDRVVVPIENRVCSGCHIVLTPQHENLVRK--KDRLIFCEHCSRILYW 232 Chlamydophila pneum...
15605123 155 EEGRSLLSQRTQLKETTDPELFSIYERLLNNKKDRVVVPIENRVCSGCHIALTPQHENLVRK--QDHLVFCEHCSRILYW 232 Chlamydia trachomatis
19553437 159 E-GEDPAVVIAHLEEKLPSEALAEFHAQRLEN-GVGAALFNGRSCSGCAMVLPATGISDIRNtpKDEVPQCPECGSYLIT 236 Corynebacterium glu...
15792055 155 KDRMSVYDKKTKLVSEMNQKVLSFYEKIRKWAKNTAVVPVKKQACYGCFMKIYDKTYLSVVK--GEEIVTCPHCGRILYK 232 Campylobacter jejuni
15805322 159 DQGEGERQERASLVEHLDARTVKEYDMIRKAKKGVGLAEVRGGRCSACNVMLPVNVQQKVAQa-KLPPVKCPSCGRFLIR 237 Deinococcus radiodu...
15645574 155 ETQQIIFKKKEELVEKTEPKIYSFYERIRRWAKNTSIVTIKKQACGGCFIRLNDKIYTEVLT--SGDMITCPYCGRILYA 232 Helicobacter pylori...
18202759 148 QVGQPHSSQCDVLIAELAPALSAPYERLCAGG-GLGVGQLQGHRCGACRSEIGRGELSCISVdvDDEVVKYPESGAIQLL 226 Mycobacterium leprae
1722934  161 QARHQHSSQRDMLTATLDPELAGLYERQRAGG-GPGAGRLQGHRCGACRIEIGRGELAQISAaaEDEVVRCPECGAILLR 239 Mycobacterium tuber...
15606457 156 RKIHEYVQKREEVKREIPEHLLKFYEENKKHFEGLVIVPTEDEACAGCGIKIPSVLLSKMIK--EDSIEQCPSCGRFVYY 233 Aquifex aeolicus
15611959 155 ETQQIIFKKKEELVEKTEPKIYSFYERIRRWAKNTSIVTIKKQACGGCFIRLNDKIYAEVLT--SGDMITCPYCGRILYA 232 Helicobacter pylori...
15639485 235 EETDEP 240 Treponema pallidum
15595058 234 QDKVQI 239 Lyme disease spirochete
15894586 236 DESEGK 241 Clostridium acetobutylicum
15618436 233 QESQVN 238 Chlamydophila pneumoniae CWL029
15605123 233 QELQSP 238 Chlamydia trachomatis
19553437 237 DIS--- 239 Corynebacterium glutamicum ATCC 13032
15792055 233 EQEEQN 238 Campylobacter jejuni
15805322 238 LDA--- 240 Deinococcus radiodurans
15645574 233 EGAYEN 238 Helicobacter pylori 26695
18202759 227 DKGFFQ 232 Mycobacterium leprae
1722934  240 LEGFEE 245 Mycobacterium tuberculosis
15606457 234 KL---- 235 Aquifex aeolicus
15611959 233 ESTHES 238 Helicobacter pylori J99
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap