Conserved Protein Domain Family
PrpB

?
COG2513: PrpB (this model, PSSM-Id:225311 is obsolete and has been replaced by 442003)
2-Methylisocitrate lyase and related enzymes, PEP mutase family [Carbohydrate transport and metabolism]
Statistics
?
PSSM-Id: 225311
Aligned: 36 rows
Threshold Bit Score: 220.232
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
18312937  10 LYERvlkNPGAEFRRLLKTEPYIFTTGVYTPLQAKLAQIAGLKAVYISGYSCSVgYLGAADLNILT-LEEYIWIARHIAN 88  Pyrobaculum aerophilum
19552286   1 -MSDl-kSLATKFASDHESGKLLVLPTVWDTWSAGLVEEAGFSGLTIGSHPVAD-ATGSSDGENMN-FADYMAVVKKITS 76  Corynebacterium glu...
1731249    1 ----------MSFHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSS-SGGHPDGHRAT-RGANIALAAALAP 68  Mycobacterium tuber...
1731249    1 ----------MSFHDLHHQGVPFVLPNAWDVPSALAYLAEGFTAIGTTSFGVSS-SGGHPDGHRAT-RGANIALAAALAP 68  Mycobacterium tuber...
15598878   1 MTSq--rQRAERFRDLHQGPGMLVLPNPWDAGSAKMLASLGFDALATTSAGLAF-SLGRRDAEGAVsRTEALENARAIVA 77  Pseudomonas aerugin...
17546167   1 MPTq--tEKAQAFRTLHERSGAFVIPNPWDPGSARLLAVLGFEALTSTSAGFAF-SRGLPDYGAG--RDAILAHVADLAA 75  Ralstonia solanacearum
15964191   1 --MSq-eERALAFGALHRKGDPVVLYNIWDAGSAQCVAEAGAKALATGSWSVAA-AHGYGDGQKLP-LPLLLETVREIVA 75  Sinorhizobium meliloti
15966102   1 MEKq--qDKHLKFRALHDREGAFVIPNPWDAGSARILAAVGFEALATTSAGLAF-SIGRRDSAAALaRDVILQNARDIVE 77  Sinorhizobium meliloti
13472467   1 -MIDq-aERARTFHSLHVKGNPIVLYNAWDPGSAKIVEKAGAKAIATGSWPVAA-AFGYADGEKIP-LELALDNIRRIVQ 76  Mesorhizobium loti
13474454   1 ------mDKGKIFRDLHAS--TFVMPNPWDPGTTKLLGSFGFKALATTSAGFAF-SRGLPDGAVT--FEQMIHHCREVTA 69  Mesorhizobium loti
18312937  89 AVTIPVVADAESGFGS-LFNAMRAVKEFWRAGVAAIHVEDQVFPkrcghlAGKQVMPLDDAVAMFKAIDRVRRNidPDFF 167 Pyrobaculum aerophilum
19552286  77 AVSIPVSVDVESGYGL---SPADLIAQILEAGAVGINVEDVVHS------EGKRVREAQEHADYIAAARQAADVagVDVV 147 Corynebacterium glu...
1731249   69 LQCY-VSVDIEDGYSDePDAIADYVAQLSTAGIN---IEDSSA---------EKLIDPALAAAKIVAIKQRNP---EVFV 132 Mycobacterium tuber...
1731249   69 LQCY-VSVDIEDGYSDePDAIADYVAQLSTAGIN---IEDSSA---------EKLIDPALAAAKIVAIKQRNP---EVFV 132 Mycobacterium tuber...
15598878  78 ATDLPVAADLENGYGDaPQDCATTIRLAAEAGLVGGSIEDASGR------AGQPIYEFSAALERVAAAVEAARAlpFPFT 151 Pseudomonas aerugin...
17546167  76 ATDLPVAADLENGFGDdPQTVAETIRLAGATGIVGGSIEDATGR------ADAPIYSLEASAERIRAAVEAARSlsFPFT 149 Ralstonia solanacearum
15964191  76 ATDLPLSVDFEGAYSEdPAQAAANVAQVIDAGGIGINFEDQMVG-------RGGVHPIDKQAARIRAIREMAERqgIALF 148 Sinorhizobium meliloti
15966102  78 ATELPVSADLEDGFGKdPLCCAETISLAAGVGLVGGSIEDATGD------AADPVFEFGLAVERVAAAAEEARk--HPFI 149 Sinorhizobium meliloti
13472467  77 AVDLPVTMDLEGGYGVePEVVAQTVTRALQAGAIGFNFEDQIVG-------GTGLHDITVQVKRVEAAAAAVKAsgIPAF 149 Mesorhizobium loti
13474454  70 ATGLPVSADLEKGKGDsAERAAETIFAAEAAGLAGCSIEDHTGD------PDRPIYDFSHAVERVAAAVEAARAlrRDFV 143 Mesorhizobium loti
18312937 168 IIARTDAIGASNvep--ekqIDEAIKRAKAYINAGADMVWAEFTRPddIDAITKFAEGVRkefpdvpLAFNYSSSFRWhk 245 Pyrobaculum aerophilum
19552286 148 INGRTDAVKLGAdvf--edpMVEAIKRIKLMEQAGARSVYPVGLST--AEQVERLVDAVS-------VPVNITAHPVDgh 216 Corynebacterium glu...
1731249  133 NARVDTYWLRQHa------dTTSTIQRALRYVDAGADGVFVPLAND--PDELAELTRNIP-------CPVNTLPVPG--- 194 Mycobacterium tuber...
1731249  133 NARVDTYWLRQHa------dTTSTIQRALRYVDAGADGVFVPLAND--PDELAELTRNIP-------CPVNTLPVPG--- 194 Mycobacterium tuber...
15598878 152 LCARAENFLHGRe------dLDDTLRRLRAYADAGADVLYAPGLNR--REQIVAVLEAVAp------KPINVLVGSPR-- 215 Pseudomonas aerugin...
17546167 150 LTARAENHLHGRn------dLADTIRRLQAYQDAGADVLYAPGLKT--HEEIATVLREVD-------RPVNVMMGFAD-- 212 Ralstonia solanacearum
15964191 149 INARTDLFLQESdaarhaalMEDAIARAEAYADAGASGFFAPGLAD--RDLIARLCAASP-------LPVNVMMKPG--- 216 Sinorhizobium meliloti
15966102 150 LTARAENFLCGRa------dLDDTIRRLVAFEEAGADVLYAPGLPD--IEAIRTVCSAVK-------RPVNVVMGLAG-- 212 Sinorhizobium meliloti
13472467 150 LNARTDIFLKAKpdahdkalLDQAIERAHAYEKAGASGFFAPGLGD--EGLIEALCKAVA-------LPVNIIALAH--- 217 Mesorhizobium loti
13474454 144 FTARAENFLWGKs------dLDDTIKRLQAFEKAGADVLYAPGIGD--VEMVRTLCSAVS-------KPVNVMAKPG--- 205 Mesorhizobium loti
18312937 246 AKIPVrfKWLAELGYKYIFITLGALHAETYAVYNFVKDLATRQeEALWELQKLKEghpTESHHKLGDFDYFKE 318 Pyrobaculum aerophilum
19552286 217 GAGDL--ATLAGLGVRRVTFGPLWQKWLAATSAQQLKGWA--------------------------------- 254 Corynebacterium glutamicum...
1731249  195 --LTI--ADLGELGVARVSTGSVPYSAGLYAAAHAARAVSDGE-QLPRSVPYAEL---QARLVDYENRTSTT- 258 Mycobacterium tuberculosis
1731249  195 --LTI--ADLGELGVARVSTGSVPYSAGLYAAAHAARAVSDGE-QLPRSVPYAEL---QARLVDYENRTSTT- 258 Mycobacterium tuberculosis
15598878 216 LELSL--DELEALGVKRVSLGSNLARVAFGAFHQAAQALARR--DLEATRAAMPF---DRINDLFR------- 274 Pseudomonas aeruginosa PA01
17546167 213 GNLSV--AELAALGVKRVSVGGALARAALGAFLRAAEELRATG-TFAFAHDAAGT---ARLNGLFAPFAPTLA 279 Ralstonia solanacearum
15964191 217 -APDI--ATLAAAGVGRVSYGPFPYREMIARLRGEAEKVYRAS------------------------------ 256 Sinorhizobium meliloti
15966102 213 QVYTV--EQLQEAGVKRISVGGSFARAALAALMSAAREVKEHG-TFTYAKSAMPA---REAASYMLDVKR--- 276 Sinorhizobium meliloti
13472467 218 -VPPR--QRLAELGVARISHGPVPYRQMAEWLEAKARLAISG------------------------------- 256 Mesorhizobium loti
13474454 206 --FTI--ADLAKAGVKRISLGPWLTNFAYGMLETATREIQQDG-TFGFTRAAMPF---GKLQALFGKSQD--- 267 Mesorhizobium loti
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap