Conserved Protein Domain Family
SET

?
COG2940: SET (this model, PSSM-Id:225491 is obsolete and has been replaced by 442183)
SET domain-containing protein (function unknown) [General function prediction only]
Statistics
?
PSSM-Id: 225491
Aligned: 22 rows
Threshold Bit Score: 233.177
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
731707    612 YAKSNKRNLKRHNSLALDHTSLKRKKLSNGIKPMAHLLNEETDSKETTPLNDEGITR--VSKEHDEEDENMTSSSSEEEE 689  baker's yeast
15618787      --------------------------------------------------------------------------------      Chlamydophila pne...
15605470      --------------------------------------------------------------------------------      Chlamydia trachom...
20090531      --------------------------------------------------------------------------------      Methanosarcina ac...
12643617    1 MSPKQEEYEVERIVDEKLDRNGAVKLYRIRWLNYSSRSDTWEPPENLSGCSAVLAEWkrRKRRLKGSNSDSDSPHHASNP 80   fission yeast
19075861      --------------------------------------------------------------------------------      fission yeast
19075578    1 --------------------------------------------------MRQTNTHleTFSLFDDVCTCLLVDKVFYWS 30   fission yeast
1176486    16 RTYTTTDKVISRSSSYSSNSSMSKDYGDHTPLSVSSAASETLPSPQYMPIRTFNTMPtaGPTPLHLFQNDRGIFNHHSSS 95   baker's yeast
6325092       --------------------------------------------------------------------------------      baker's yeast
13476347      --------------------------------------------------------------------------------      Mesorhizobium loti
731707    690 EEAPDKKFKSESEPTTPESDHLHGIKPLVPDQNGSSDVLDASSMYKPTATEIPEPVYPPEEYDLKYSQTLSSMDLQNAIK 769  baker's yeast
15618787      --------------------------------------------------------------------------------      Chlamydophila pne...
15605470      --------------------------------------------------------------------------------      Chlamydia trachom...
20090531      --------------------------------------------------------------------------------      Methanosarcina ac...
12643617   81 HPNSRQKHQHQTSKSVPRSQRFSRELNVKKENKKVFSSQTTKRQSRKQSTALTTNDTSIILDDSLHTNSKKLGKTRNEVK 160  fission yeast
19075861      --------------------------------------------------------------------------------      fission yeast
19075578   31 QIHKVRKLVDRSIERMESCSIINIITKYIIEQTDLDQAAKNILQFRELDPLLRRLSSTSLLAFTRHLKYYLSLYLPSCKF 110  fission yeast
1176486    96 GSSKTASTNKRGIAAAVALATAATIPFPLKKQNQDDNSKVSVTHNESSKENKITPSMRAEDNKPKNGCICGSSDSKDELF 175  baker's yeast
6325092     1 --------------------------------MTIDGDVHEISPFFQVRQTKWGGRACFSNGNIPKGTTVLQVSNFTGTS 48   baker's yeast
13476347      --------------------------------------------------------------------------------      Mesorhizobium loti
731707    770 DEEDMLILKQLLSTYTPTVTPETSAALEYKIWQSRRKVLEEEKASDWQIELNGTLFDSELQPGSSFKAEGFRKIADKLKI 849  baker's yeast
15618787    1 -------------------------------------------------------------------------------M 1    Chlamydophila pne...
15605470    1 -------------------------------------------------------------------------------M 1    Chlamydia trachom...
20090531      --------------------------------------------------------------------------------      Methanosarcina ac...
12643617  161 EESQKRELVSNSIKEATSPKTSSILTKPRNPSKLDSYTHLSFYEKR---ELF-RKKLREIEGPEVTLVNEVDDEPCPSLD 236  fission yeast
19075861      --------------------------------------------------------------------------------      fission yeast
19075578  111 EICSTNQYFSSSKPEACVIARESINAGEDITDLCGTIIKLSPKEER--NIGIGKDFSILHSSRLDSMCLFLGPARFVNHD 188  fission yeast
1176486   176 IQCNKCKTWQHKLCYAFKKSDPIKRDFVCKRCDSDTKVQVNQVKPMIFPRKMGDERLFQFSSIVTTSASNTNQHQQSVNN 255  baker's yeast
6325092    49 ISYEFRKEVCHNCFAYANAKTMKYKLNYDYLRDLVCNAHYQINPKKFLGAGLWFCSEHCRTSYLQIPNIIELIECYEILL 128  baker's yeast
13476347      --------------------------------------------------------------------------------      Mesorhizobium loti
731707    850 NYLPHRRRVHQPLNTVNIHNERNEYTPELCQREESSNKEPSDSVP-QEVSSSRDNRASNRRFQQDIEA-----QKAAIGT 923  baker's yeast
15618787    2 STVTTEPCSSIHISLNNDWRDSQPYSLDRASELLHFRFLPSLVFS-NWKVEQQIETLCHKSEKRRLIS-----PLAKWLG 75   Chlamydophila pne...
15605470    2 TTNSTQ--DTLYLSLHGGIDSAIPYPVRRVEQLLQFSFLPELQFQ-NAAVKQRIQRLCYREEKRLAVS-----SLAKWLG 73   Chlamydia trachom...
20090531      --------------------------------------------------------------------------------      Methanosarcina ac...
12643617  237 FQFISQYRLTQGVIPPDPNFQSGCNCSSLGGCDLNNPSRCECLDDlDEPTHFAYDAQGRVRADTGAVIy---eCNSFCSC 313  fission yeast
19075861      --------------------------------------------------------------------------------      fission yeast
19075578  189 CNANCRFNTSGKRIWLRCVRDIKPGEEITTFYSSNYFGLENCECLcVSCERMGINGFKKLFHTSATSTscsskSSSDVSD 268  fission yeast
1176486   256 IEEQPKKRQLHYTAPTTENSNSIRKKLRQEKLVVSSHFLKPLLNEvSSSNDTEFKAITISEYKDKYVKm---fIDNHYDD 332  baker's yeast
6325092   129 HHFPSMLKRYNYTSEQEEKLNSILISENVIQSSWDEIESKWIPRInNMKSAKRINQLPPTCEDEYCCIr-----FVCESL 203  baker's yeast
13476347      --------------------------------------------------------------------------------      Mesorhizobium loti
731707    924 ESELLSLNQLNKRKKPVMFARSAIHNWGLYALDSIAAKEM-----IIEYVGERIRQPVAEMREKRY-LKNGIGSSYLFRV 997  baker's yeast
15618787   76 KLHKQDL-LCPPAPPVSVCWINAHVGYGVFARDEIAPWTY-----IGEYTGI-LRHRQAIWMDEND-YCFRYPMPLFTLR 147  Chlamydophila pne...
15605470   74 QLHKQRL-RAPKNPPVAICWINSYVGYGVFARESIPAWSY-----IGEYTGI-LRRRQALWLDEND-YCFRYPVPRYSFR 145  Chlamydia trachom...
20090531    1 -------------MSLISVKDAPGKGRGVFAQRNLKKGE------VIETCPVIVLPPEEVNTLELT-QLYNYYFAWGTDS 60   Methanosarcina ac...
12643617  314 SMECPNRVVQRGRTLPLEIFKTKEKGWGVRSLRFAPAGTF-----ITCYLGEVITSAEAAKRDKNY-DDDGITYLFDLDM 387  fission yeast
19075861    1 -------MRIPVIRSPLEIRDTERKGRGVFALEPIPAQT------CIEISPVLMFSKEEYEQHGQY-TVLNEYTYVWSEG 66   fission yeast
19075578  269 LSSLPQSNRYVISEEDRSFLNIWDSGGELSDASSSDLDEE-----FSLFIPRHKKRVWSREKRLLSeMAITNHSPLLNVD 343  fission yeast
1176486   333 DWVVCSNWESSRSADIEVRKSSNERDFGVFAADSCVKGEL-----IQEYLGKIDFQKNYQTDPNNDyRLMGTTKPKVLFH 407  baker's yeast
6325092   204 FNLKYMDPQCITYRAFNMLQSNELSKISKFPVLLHFQKLVfqtlyILLPSHLHRMLSIPLLRHILG-TEYGNAFGLWQEG 282  baker's yeast
13476347    1 MKPARAQ-GSIMLLVDVYLDKSPIQGIGVFAKHHIPMGTL-----IWKLDPRFDRIIDVETYEGES-GPVKNYLDRYSYP 73   Mesorhizobium loti
731707    998 DE---NTVIDATKKGGIARFINHCCDPNCTAKIIKVG-----G----RRRIVIYALRDIAASEELTYDYKFEREK----- 1060 baker's yeast
15618787  148 -----YFTIDSGKQGNVTRFINHSEQPNAEAIGVFSE-----G----LFHVIIRTVAPIYAGQEICYHYGPLYWKhr--- 210  Chlamydophila pne...
15605470  146 -----YFTIDSGMQGNVTRFINHSDNPNLEAIGAFEN-----G----IFHIIIRAIKDILPGEELCYHYGPLYWKhr--- 208  Chlamydia trachom...
20090531   61 R------AA--AIALGYGSLYNHSYTPNAEYQKDFIN-----G------LLKYVCIKDIRKDEEITINYNCDPEDkt--- 118  Methanosarcina ac...
12643617  388 FDdasEYTVDAQNYGDVSRFFNHSCSPNIAIYSAVRN-----HgfrtIYDLAFFAIKDIQPLEELTFDYAGAKDFspvqs 462  fission yeast
19075861   67 K---------QGLALGLGSMFNHDRHPNVYWKKDNRN-----N------YISYYTLREIKTNEELCISYGDHLWFede-- 124  fission yeast
19075578  344 DY---RKFREDLWKKRHGKRKVYQCS-NCSQTFINED----------IQNSSAFCPKCIRHSKLFSLPWPCRHKVnre-- 407  fission yeast
1176486   408 PHw--PLYIDSRETGGLTRYIRRSCEPNVELVTVRPLdekprGdndcRVKFVLRAIRDIRKGEEISVEWQWDLRNpiwei 485  baker's yeast
6325092   283 EAs-dSREYFGYWVFPEASYFNHSCNPNITKYRKGN-------------SMLFTMNRDIKKDEQICIDYSGVLDLptvk- 347  baker's yeast
13476347   74 DR---RDPAYIVFEADDARYMNHDDEPNCDVSSPEE----------------TYALRDIAPGEELTCNYNHFFEAgf--- 131  Mesorhizobium loti
731707   1061 ---------------------DDEERLPCLCGAPNCKGFLN 1080 baker's yeast
15618787  211 -------------------kkREEFIPEEE----------- 221  Chlamydophila pneumoniae CWL029
15605470  209 -------------------kkREEFVPQEE----------- 219  Chlamydia trachomatis
20090531  119 -------------------pvWFDIASQN------------ 128  Methanosarcina acetivorans C2A
12643617  463 q--------------ksqqnrISKLRRQCKCGSANCRGWLF 489  fission yeast
19075861  125 -------------------asSASRISPNEENEDFPLQNIS 146  fission yeast
19075578  408 ------------------lklEKEKEINTKRNLVTSSHSMS 430  fission yeast
1176486   486 inaskdldslpdpdkfwlmgsIKTILTNCDCACGYLGHNCP 526  baker's yeast
6325092   348 ------------------rraFLADSWFFDCACERCKSELQ 370  baker's yeast
13476347  132 -------------------dfLGDRHL-------------- 139  Mesorhizobium loti
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap