Conserved Protein Domain Family
COG3291

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COG3291: COG3291 (this model, PSSM-Id:225828 is obsolete and has been replaced by 442520)
PKD repeat [Function unknown]
Statistics
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PSSM-Id: 225828
Aligned: 83 rows
Threshold Bit Score: 71.8431
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
20093372 2663 AFNANVTEGEVPLTVQ-FSDESTGS-----------PTSWFWDFGDG--AN------------STEQNPSHTYPSAGNYT 2716 Methanosarcina ac...
20089234  454 NAEGESSKTDSVNVLQaPEMVRPVAdfstnttqgpaPLAVQFTDRSQnaVSwswdfdndgqpdSTVQSPVYVYEAPGDYT 533  Methanosarcina ac...
20089377  494 wqgsrnnywrilmynistskktlittnkstqefpsiygntivwtddrngnglpgnsdiyiynlsidmetqvttdksdqkn 573  Methanosarcina ac...
20090061   94 YIEAPTLDENLPAGWDvTVIENNGAtfqnsetfkasTLEWIWVENLQagGKk----------tVEYRVTVPSNTEPGNFT 163  Methanosarcina ac...
20090280  186 ynnsfgvSGDPDLMIE----D------------------ISWEPENP------------------HENENVTFKVT-LKN 224  Methanosarcina ac...
20091122  574 gkdiymydlstatetrittsvsasnlaiyddrivwdenrrfngnpeiymwnlststeskitsnepyqsviyvalpaiygd 653  Methanosarcina ac...
20091170  379 N---DVSSDSMLQTITvVEPATPVAnftsncttghqPLSVAFKDTSTgvRTswawdf-gdgntSTRQNPVHEYSKVGNYS 454  Methanosarcina ac...
20091708  477 kefttenVIDRFPLVAvAPPVVPVAnfstnvssgyaPLAVQFTDLSEdaTGrswdf--gdgnnSSEQNPIHSYSMVGSYT 554  Methanosarcina ac...
20091819      --------------------------------------------------------------------------------      Methanosarcina ac...
15678103   78 stiinldqgrrvglsfnsmasppspsgtgtgtlqkagylqvaknvkafmesygrspnyastaigqvrpesliyanariin 157  Methanothermobact...
20093372 2717 VNLTVEN---AAGSDFELKSDYIEVSd----ASGSTVTLYFDPTS--SSVAENESTEISIVASNFPAGLSGYN--LTVAI 2785 Methanosarcina ac...
20089234  534 VNLTVSNpngTASKTLGIEVLEPEEDe-----gLPVADFSANVTSgyYPLTVLFTDLSQN-ATGRSWDVNGDG--VEDSN 605  Methanosarcina ac...
20089377  574 paiygnkivwedwrngnpdiylcivsvekaelkppVADFNINVTSgySPLSVQFTDLSKN-AVSRVWDFNNDG--VTDSI 650  Methanosarcina ac...
20090061  164 ISGNVSAy--SISAVPVTGASEIIVT-----YPSPEAEFSATPLSgnVSLAVQFTDLSTNNPDSWQWDLNGNG--SIDST 234  Methanosarcina ac...
20090280  225 VGLASSG---NCSVKCYLDGNEISFS--------TVSGLEADSTT---SFTFNWVPTSSG-SMDLKVVVDSEGqfVEFTE 289  Methanosarcina ac...
20091122  654 rivwddnrngnadiymftlasaevpdsggndsespAAEFTSNVSSgnAPLSVLFTDLSQY-ATGRSWDFNNDG--ISDSS 730  Methanosarcina ac...
20091170  455 VRLTVENdegSNST---QKINYITVLp-----qPPSANFYSNVTSgnVPLTVQFCDSST--GTPASWNWDFGD--GYTST 522  Methanosarcina ac...
20091708  555 VNLTVSNpngTDSKTAVITVLEEGGDednetEILPVANFTVDKTGgyYPLTVLFTDTSQN-ATGRSWDINGDG--VEDSN 631  Methanosarcina ac...
20091819    1 -------------------------Mg-----eLPVFSFNVSPQEgyAPLAVQFNDTST--GNVTSWLWDFED--GDNST 46   Methanosarcina ac...
15678103  158 fynstgrlpnyvtvEYVTGKGGIIVR--------PRADYTYTIQG----YNVQFQDKSTGTIQYYKWDFGDQ----STST 221  Methanothermobact...
20093372 2786 DDPAVAEIIDIEYPTWALITENST-LPGTSIYMKTID------------------------LEDSVKEGAADVMLATLTV 2840 Methanosarcina ac...
20089234  606 EASFAYTYTSRGTYEAKLTATNEN-GTNTKTMEIDVKkkssggs-----------ssggggGGGGSPEPARNVETKELAQ 673  Methanosarcina ac...
20089377  651 DANVVYVYTAPGTYTVNLTVSNEK-SAVSKTRTIDVLkksss--------------ggssgGGGGSPEPAKNVETKELSQ 715  Methanosarcina ac...
20090061  235 DKNPTWIYETPGTYTVTLTASNSTyGNDTETKTGFITvteeasssegsssrssgssgggggGGGGSPESSRNVELKEVAN 314  Methanosarcina ac...
20090280  290 ENNEKTGIFKVISYTNSSSPSSPSpGSGSSSSSSSSGg-----------------------GAGGSPEPASNVEIKELAQ 346  Methanosarcina ac...
20091122  731 EIAPVYVFSDPGIYTVKLTVNNAN-GTDSKTTTITVErkssgg-------------ssgsgGGGGSPEPAKNVEVKELSQ 796  Methanosarcina ac...
20091170  523 EQNPVHTYCTAGTFNICLAVSNAG-GTSSKAASITVMeesssegsnsgg-sshssssrssgGGGGSPEPAKNVEVKELSQ 600  Methanosarcina ac...
20091708  632 ETSFSYTYTSRGTYTAKLTAINAN-GTDIKTTTITVEkkssgg-------------ssgggGGGGSPEASSNVEVKELSQ 697  Methanosarcina ac...
20091819   47 SQNPSHEYTGSGTYSATLNVSNIY-GYDAVIWTDYIEvgeeddssgs-----gssggtssgGGGGSPEHASNVEVKELAQ 120  Methanosarcina ac...
15678103  222 QKNPVHAYKP-GTYKVTLTVQGYG-ITDTKTITLEVM----------------------------LAT---VHVNSTATS 268  Methanothermobact...
20093372 2841 SGKE-------SGSANLSIGVKRLEDD--SGDSIEPALLAGTIEVTLLSPLPDQEYAPKDLDGDGLYEDLTGNGEFSFVD 2911 Methanosarcina ac...
20089234  674 VFIIngnavkfDFTKNATCVAYVGFDSirNAGKTTTIVEQLKTKSTLVSELSKGEVYKYFNVWVGNSGYATSKNIENPVV 753  Methanosarcina ac...
20089377  716 AYITngkaikfDFAKNATCVMYVSFDSkkTAGKTTTIVEQLKNKSALVSELPEGEVYRSFNVWVGNNGFATEKNIENSVI 795  Methanosarcina ac...
20090061  315 EQVFkgihtcyTFQGETNEIVSIEFDPkkNFGKTTTIVEMLKNTSSIVEEPAPGTVYKNLNIWVGNSGFSSSDNLENARI 394  Methanosarcina ac...
20090280  347 QFVSngnhakfIFAKNVTSIAYIEFDPkkTVGKTTTIVETLKGKSTLVTELPTGKVYKNTNIWVGNEGTASSENIENAVV 426  Methanosarcina ac...
20091122  797 VFITndkavkfDFVKNATCVVYVGFDAkkTAGKTTTIVEELKGKSSLVSELPSGDVYKSFNVWVGNSGYATSENIENPVI 876  Methanosarcina ac...
20091170  601 VFITndnpakfNFPKNATAIVYLSFDSkkTVGKTTTIVEMLKNKSTLTPETPEGEVYNYLNIWVGNSGYATEKNIENPVV 680  Methanosarcina ac...
20091708  698 VFITndkaikfNFAKNATCVVYVGFDAkkTAGKTTTIAEQLKNQSTLVSGTPSDKVYKFFNIWVGNSGYATSKNIENPVI 777  Methanosarcina ac...
20091819  121 EFVTigdrikfEFTKNATAVMYVKFDSkrNIGKVTTIVEQL--------------------------------------- 161  Methanosarcina ac...
15678103  269 SGKP----------LNLTFKIP-------LNDTVKWISIGaissglfnetiflvedgiayklaevtnpfyqansqsqrei 331  Methanothermobact...
20093372 2912 IVAYFHNMDWIEENMPVEYFDFNGNGRIDFDDVVDMFGMI 2951 Methanosarcina acetivorans C2A
20089234  754 CFKVEKSWLQNENIDQDSIVLNRYNDEKNWEQLTANRTAE 793  Methanosarcina acetivorans C2A
20089377  796 GFRVEKAWIQDEKIDQISILLNRYNDKK-WEQLPANLSGE 834  Methanosarcina acetivorans C2A
20090061  395 NFRVNGTWLSENRISETTMTLYRYSDDT-WNALPTNLTGE 433  Methanosarcina acetivorans C2A
20090280  427 GFKVEKTWINSNGVDSSSVKLWAFED-EKWVELPTSQTDE 465  Methanosarcina acetivorans C2A
20091122  877 CFKVEKAWLQDKNIDQASIALNRYSDEK-WEQLPANLSGE 915  Methanosarcina acetivorans C2A
20091170  681 CFRVEKGWIQDKGIDQASVVLNRYGEKK-WNELPGTLLRE 719  Methanosarcina acetivorans C2A
20091708  778 GFKVEKAWVQDEKIDQSSIILNRYSNKT-WEQLPASLSGE 816  Methanosarcina acetivorans C2A
20091819      ----------------------------------------      Methanosarcina acetivorans C2A
15678103  332 vwqviaglnrlieiytklgaepqvneylnnfnltqaekif 371  Methanothermobacter thermautotrophicus str. Delta H
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