Conserved Protein Domain Family
COG5617

?
COG5617: COG5617 (this model, PSSM-Id:227904 is obsolete and has been replaced by 444348)
Uncharacterized membrane protein [Function unknown]
Statistics
?
PSSM-Id: 227904
Aligned: 7 rows
Threshold Bit Score: 672.619
Created: 7-Oct-2002
Updated: 23-Jan-2015
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
15895789   24 LIFVRNLIILFIFSLITLVAINRNGQYPWG-SDTYGHLYKANILFDSIKKGTL-FLNYDRNWYNGVQPYRYWAPFPYYIL 101  Clostridium aceto...
15895841  193 rVLISLFIIMFLGTSLMVYLKNIEG-YPWG-VDTYGHLFKADFLYKSIRQGNL-YPLFTNYWYNGIQPFRYWAPFSYYLL 269  Clostridium aceto...
15895852  188 kVLASALLFGVLAVLLSLYMAKEKG-YPWG-IDTYGHIFKADFLYRSLKDGNM-YPLFTKLWYNGIQPFRYWAPFPYYIF 264  Clostridium aceto...
20093965    5 DVLCALVAFLVGAVVSSPSLDYGWNWFPSG-ADARGHMTKVWMLEKLWSMGDVpYPKWSEYWYCGYPFLWFYPPLAYFIP 83   Methanopyrus kand...
20094035    2 FGDSRLVLALLVILVGATIANAGNLMYPLLsRDSRAHVLKIWYTYHMLADGRW--DPWCPMWYSGFPYLTYYGSLGYLLG 79   Methanopyrus kand...
20094875    1 -------------------------------------------MSELFERGHW--SYWCPVWYCGFPFLLYYPPLFYLVG 35   Methanopyrus kand...
14521868    1 MKRKLYYLTLATISVIEYIPLYLAPSPPALqINGNGHLFKV----HKLMTSGW--KPWIEDWYAGYPFLRFYPPLSYLTA 74   Pyrococcus abyssi
15895789  102 AVINMFTN-NMITTFDVFVELVF-MVGGMGWLFWGYYTRRQNIAIVLAILWFFIPDNLRVLFSEGNIPFVTVISISPMVF 179  Clostridium aceto...
15895841  270 AACEFLVRgNVSGAYLIFISLIF-FIGALGWLIWGIRERSIFISLVLGILWFFLPENLKVLFYEGNIPRALITALLPYLF 348  Clostridium aceto...
15895852  265 ALLEFLTGgNVSQAYIMFIGLMF-FVGAFGWLLWGNREKRVFICFIFGVLWFLLPENIRIFFFEGNIPRVVIAALIPYLF 343  Clostridium aceto...
20093965   84 ALMTHLAKtDVLTAWKWWTWLAYsLAGPSVYASARLMGASPLGSLIAAVAYQTSYNHIEITFTEGRIPTVAAIVFYALVP 163  Methanopyrus kand...
20094035   80 AAVDAIVK-DPVRTFVVCLIVASaLIGVGVYALVRARGYARKVAVICALLGLTSGGFMKALNWEGVYPTILSLGFGFLAL 158  Methanopyrus kand...
20094875   36 GALNLPLG-DPVQTLRILGLTAVyLLVVGIFFACRQLGFTTFEAALSTLLFLTSPSILWEINRGGIFPMMMSLGFGLLAL 114  Methanopyrus kand...
14521868   75 GVLGKVLG-SDTKGYAATLMLTS-FLGALALHHY--LKSTGREPCISPLIFLLFPWHLTVSYIEGNFPRANAIHLAPLFL 150  Pyrococcus abyssi
15895789  180 FYYYKSM-MGKKIRDYLRLAMLMSILTLTHAMISAIVGMALFIVGLAYAISKKRYYEN-IISLVYALLGMLCSSFWLYPA 257  Clostridium aceto...
15895841  349 YFLWDFVnYGRKW-SILPMTLFMTLITMTHLMVAAMVVTASFVFLFIYSIIFKKVIKP-LQCLTAMGIGIAICGIWLYPA 426  Clostridium aceto...
15895852  344 YFLWGFVeKGKKA-SIIAMAGIMLLIIMCHLMVAAMLGITTFIFLLIYAVLSKKFLRS-IQSIAAMLLCFAIAGIWLYPA 421  Clostridium aceto...
20093965  164 GLLVAVY---RRVWERGRWAGYLALVLSLTILMHHSSGLAAITVCLAYVAL--R-----------------ISRSWTLWA 221  Methanopyrus kand...
20094035  159 SCYERWLr-GEKR-HLAYATLLLVPACYSHPLGGLLSGGLILTRGIAEAVLREKLRTPrFLLQSTAPVAIGIAIAFSHYA 236  Methanopyrus kand...
20094875  115 GLLERTLsRGFTPKSALGVIALITLSLFTHPIGGMTCQGALILRVLLEVVPEGSLRPNqWFRALTDRQNLPLLLPAALPL 194  Methanopyrus kand...
14521868  151 LSLYWLRe--KRERYLIASALGISIVALTHYSILPLLIITGILILWDDLRTMTALGNG----IKVLGAVIGLTSFWYVPF 224  Pyrococcus abyssi
15895789  258 LKGGIMSIDKGAVSDVMQSLTYPLTVSLDPLLRFKD---IEMYYFGLSFGIVILFGILFATRNEIA-----PFVAALIIL 329  Clostridium aceto...
15895841  427 LKGGLTSMDSEATSEVMKFFSAKFTDALNPFIRLTQegrNGMFYYGLSIFVVAVLGIILSKKKSLP-----GFITSVVIF 501  Clostridium aceto...
15895852  422 LKGGLVSMDTDSTSEVMRALSTPFTTSLDPLIRLTAagrSGFFYYGVSIFVISCLGIFLSNKKSVP-----GFLTVIIVF 496  Clostridium aceto...
20093965  222 VG--------------KEEL--PSILPEVPGHAWVL------FAILLSVLAVS-WWLMPALEYRTY-----SYTTKPKWW 273  Methanopyrus kand...
20094035  237 AAIYYKRFLS------ELWLYPPGSVAGVLKDLTVG----GKWSTGLLVTVTGIVGVAYEIRRRT------GFGLFVLFW 300  Methanopyrus kand...
20094875  195 LLAAPQYLPMLLYRGYISPLVTPAPQTPLDCIVTLLs--CPMWSPLPFFILLSVLGAYYALRRSGPgirlyGALTCLIFC 272  Methanopyrus kand...
14521868  225 LFD-------------KKWVEFWNISENKALFKSFSl--NPTLLKSPFGILLILLLLIFAIFAIK------NLVDRKKVI 283  Pyrococcus abyssi
15895789  330 VGTTKSALPLLVKLPMNQLFWMRRFTAFAIAMIFIGLITWIKL----RKSILIIILISLVVDSSAS-----FYILGYNRP 400  Clostridium aceto...
15895841  502 LGSTTAFLPIVSKLPLNQLFWMIRFAPIAYALFTISLLNWKSL----KRYIKLIVLIIIIADSSLS-----FRFSLYPKG 572  Clostridium aceto...
15895852  497 LGTTTAFVPVLLKLPLNQLLWMMRFTPIAYGLFIMSLINWGKC----KKVFMAIFLSLIILDSSLS-----FNFVLFPSE 567  Clostridium aceto...
20093965  274 ISMSSVHDPWEFFVPD---YWKTRYAKYVGAIQFL--LGWAG---------------LILAARRRP-----RTFLPFAIM 328  Methanopyrus kand...
20094035  301 G-MVSIVVTFAFVLGY---WKYLPLGKNMLAERYTTVLMPMLL----AVTAAPVVRQLLRSVKAAW-----AAPLGVAGL 367  Methanopyrus kand...
20094875  273 ASVFSLLAFWSIYKVAPGGQLITHRLPGVLFPLFGALILGCVIrhrpKVFATLAIPQLLLFAVYVWsytqpVDLDSVREG 352  Methanopyrus kand...
14521868  284 LAGLYLYLSLGFYSPT---TWLYSFPLLSIVPPYR----WFDL----EALIIPLLIGESLKRVQRK-----SMVALVIIP 347  Pyrococcus abyssi
15895789  401 YPGDIAKTIDIACSIAKQRVGVLDN------------STYGSFPTYYISy------------nSVNGVKQQVYGWAWQG- 455  Clostridium aceto...
15895841  573 KNLEAIKVLSKAKAVTKQRISLMDD------------STFASYASYYIC--------------NGKDKSAYSYGWAWQG- 625  Clostridium aceto...
15895852  568 KSNTVESIIESAKKVTNQRIALLDS------------SMFGSYPSFYIP--------------SIGKETAYSYGWAWQG- 620  Clostridium aceto...
20093965  329 TGVALLLSFGLVLQKPMERIGFEP-------------KWFLMFSAVILC--------------TFVAFVVDNFRFLRR-- 379  Methanopyrus kand...
20094035  368 LLSGSVGALTYVPPEPPHVTSSAMK------------LWKWMGDSWPDDs-------------YTARCDADPYTHLFD-- 420  Methanopyrus kand...
20094875  353 HIPSPVVHLWKAMDLLPRCVGAGLTspqsllwtlvaaGGFFTLDTKPTEdakcalhylrhqggPYDRVTFDPFTHVPLYr 432  Methanopyrus kand...
14521868  348 FTVLAFMNVPKINPYPQDLIKICEN----------------IK-EEPGD--------------DWRIFVLTDVGEAIN-- 394  Pyrococcus abyssi
15895789  456 ATTANNIVTLNTALENHYFGLMFDRALEVgadTLVIRKRLITK-KSQYKELDKYAAKVGYVKYTENDDAMIYMYP----V 530  Clostridium aceto...
15895841  626 AATSSNIVLLNTALENGYYKYMFDRSLEMgcdTVVLRKSVIKDnRKSFSDIDYGAKLSGYKLCFENADSYIFHKS----T 701  Clostridium aceto...
15895852  621 ASTSKNIVLLNTALENGYYNYMFDRSIEMgcdTVVIRKASLEKkKSSFKLIDEAAKKLNYFLYNETVEGYVYHRE----T 696  Clostridium aceto...
20093965  380 HTVLIMICSMMVVDAAIGLKYAY-RPVHY---TVSELSALLWM-REHTGPWDR-VATVGYRALWG-MEPYITG------A 446  Methanopyrus kand...
20094035  421 ASVPISPIYSGHPTIMGWFSQGDPMFFSL---AARWEWELGWVyDPNTLKTSLWATNTRYLLTKSSLLSKKLSQEpgfvL 497  Methanopyrus kand...
20094875  433 CDSAFVPIESGHYSLLGWFNQGDPAFYSL---AWYVEWQHSWVfYPNAVLTVFHLANVRYVISGSPKWTASLERLpefhR 509  Methanopyrus kand...
14521868  395 ---SYLPAICKKPTLNGWYHEGSPTKAGE----R--RMIYILTyGGNLTPYLK-AYAVRFLITPKEINGYEMVLRig-kY 463  Pyrococcus abyssi
15895789  531 KGTFGTEVNYEGIAIGSYASNITYLFPEFEVGTKPYFDDYTYgeLKNKKAVYLAGFKYRDRDKAEELFLKLSRSGVKVL- 609  Clostridium aceto...
15895841  702 PKAFGVITKYEGLCIGKSAKEIQLLYPSFKIGSSNNLEDYSLndLMKYKIIYLSGFSYNNRSKAEGIVKKLSKKGVRVI- 780  Clostridium aceto...
15895852  697 PKTFGVVTKYYGISIGRSAEEIPLEYTGFKSGASYSIDDYRLeeLQKYKIIYLSGFNYKNKAKAENMISKLSKMGIKVV- 775  Clostridium aceto...
20093965  447 PSVFGWYR--EGTPIRDVVVQYQRSFKRVEPNKALKIGDV----LGVRFLILSSRKPYAKR-----MITELERVGVRPI- 514  Methanopyrus kand...
20094035  498 RKKAGDYRVFEFLGHGGSACVVPHPIAVVDRRLGLRTENAYY--TTLLNFVATPGNRYVFVDATFCDARKFDRVIVRPLt 575  Methanopyrus kand...
20094875  510 LTDFGRYTVFSTSVSPGPAELVPRPILVIDDILRRPNPYY----TMVLNIIPDGGTRRIFVEGSPEDVARFRQIIVRTDr 585  Methanopyrus kand...
14521868  464 KVYKGDTSFFQPVSVIVMGKYYELPFDFVYIKDTKIISGQ------PNVVVLYIGQPSKEEESMLWKFIKNGGTVIWVP- 536  Pyrococcus abyssi
15895789  610 -IDITGME-D--SG---FLNVTGQPIVIKN-------------------KFDELYFN----GNKLNTA-KFPSDYPSWNA 658  Clostridium aceto...
15895841  781 -VDMNRIPtDniTDrmiFLGVISEPIVFDN-------------------KMPDLFFN----KERYVADvKFKEEYKKWNT 836  Clostridium aceto...
15895852  776 -IDMNRIPsDetTNrmsFLGVTAQPITFDK-------------------KLPDLFYE----NEKYVSG-AFKKEYTKWNT 830  Clostridium aceto...
20093965  515 -RDYRWVKvYefNPtmgYEIDDIKSVFLGN-------------------KYRYMRLC----KLLRYDP-KYAPAYAFTRI 569  Methanopyrus kand...
20094035  576 pGDVDRAVkLarEGrkvLLILPVSDTRVAR-------------------AVERLGVR----VSPASPP-SFVPLRKYLPS 631  Methanopyrus kand...
20094875  586 pDTLDEVLrKmkSGr-vLVIVPANDYATARylaerfglhvrpvivcpwePLPSMKVCnrliDAYRFVGiTVPGATPEERT 664  Methanopyrus kand...
14521868  537 -ETKGEFLgIkaEIr-aISNDELRSSLFNVs------------------RFSPFSYNhrswYAPVFSSnIVRPLISVGNY 596  Pyrococcus abyssi
15895789  659 NFLNGVNNRKDYVVVDHRLIKYVGN--KDNKNLTFIGLNIPYFVFLTKDEGLMKVLEQALDMKSYE-LPKRVVKDVKIQI 735  Clostridium aceto...
15895841  837 VYLTNTQNVKGFSWINDKKIAFLASgiKDNKNVYFLGFNLMFNGMTNEDSKSLDIMNEIIGKELTN-VPKREIVPLKVSY 915  Clostridium aceto...
15895852  831 VYLQNVSDIKGFSWIKDKKLTFMGKgtGDNKNITFVGFNLMFHAMTNEDNGALSIMDNVMGSNKE--TPTRTIVPLNVKY 908  Clostridium aceto...
20093965  570 PDCDLVRYAHPQVVVMDRHPSPEEVrvLKEFGVKEILVLDRYHKFKTKIFGINIVHDRPLRIVKM--LPKRNLKPIRVDL 647  Methanopyrus kand...
20094035  632 AYRVDGRWWKDVRVGHGLVRVCGVDvvYFTMRFHRLIKEVQTEGYRMPRLPTDEERKFVNGVLRGFdSGKPTQVHLEYRG 711  Methanopyrus kand...
20094875  665 WFLFNGRPWVDVKLGKVEVRVCGVDfvDLAGTLHQT----LYYGAGAYPLPPKWERALLNEVLRGFdSGKPRPVKFKAVE 740  Methanopyrus kand...
14521868  597 TLIGEVRIGNGTLYLAGGNLIFHALsyKSSYEISIIRALIGNMDKSTIVNYKLLERSDGRLVAEIN-STERTLIRVSEAY 675  Pyrococcus abyssi
15895789  736 KDNNIKVKGSSKEI-VPIAALDSFVKLKGNYN-SENNLIHLK-SSSVEVKIIYPHMGVGIVISIIIIALTTALSIYIKLK 812  Clostridium aceto...
15895841  916 NKNSIKINSPKKSVnTTIAFLDAYMSDKKIY--MDQNLLNVReKGVTNISVTYPYLKKGIALSLMGLIGLIIL-IVFVFK 992  Clostridium aceto...
15895852  909 SKNSIVIDSRDKDVnTTLAFLDSYKSKDKIY--SDQNLLKVG-KGKTEIQVTYPYLAKGMILSLMGILGFLVL-IMVVYR 984  Clostridium aceto...
20093965  648 GHAWFKVYGRGWVW-VKVPYFPCWIPDRGVRLgGIDNMILLRvPSPTTVKFVWNPHPLWIALSAFSLCVSLYLTFSRQWR 726  Methanopyrus kand...
20094035  712 DPAVMRVCGNGWVY-LKVKYFPAWRSSDGPVYpASCGQMLVRaHGDTVLRYELPQSLSYGSY-AAAVLGTLALGAMLLWM 789  Methanopyrus kand...
20094875  741 -PDDVRVRGKGYIL-VKIGYHPAWHANAPTYR-GSGGLIIVRsTGVTRLRFGFTWWERMLWWGAFAIGLMGSTWLYLRGR 817  Methanopyrus kand...
14521868  676 -----YPYWKGYINgREVRLFRDYRTGLMIFT-FPRNGTLVIeFKDPFLPLRRYSLVGWIILTAYLVIETGKTYKKRYLH 749  Pyrococcus abyssi
15895789  813 NKDMLEE 819  Clostridium acetobutylicum
15895841  993 GKGECIE 999  Clostridium acetobutylicum
15895852  985 GGRHSEE 991  Clostridium acetobutylicum
20093965  727 T------ 727  Methanopyrus kandleri AV19
20094035      -------      Methanopyrus kandleri AV19
20094875  818 DEGR--- 821  Methanopyrus kandleri AV19
14521868  750 SIFEGRR 756  Pyrococcus abyssi
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap