Conserved Protein Domain Family
PRK11789

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PRK11789: PRK11789 
1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD
Statistics
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PSSM-Id: 236984
Aligned: 297 rows
Threshold Bit Score: 285.931
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
296112740   3 SAFVIQHGIL-Q--G--ATFIKSDNFNARPADKTglITGIVIHNISLPPSQFGQvnangvHHVKAFFQNQLNPDDHVYFQ 77 
33599494    3 RLLLDRHGWLiP--GpaVTRAPSPNVNARPAGTQ--ISLLVIHNISLPPSQFGG------PYVADLFLNRLDYSADPWLE 72 
33595206    3 RLLLDRHGWLiP--GpaVTRAPSPNVNARPAGTQ--ISLLVIHNISLPPSQFGG------PYVADLFLNRLDYSADPWLE 72 
33591337    3 RLLLDRHGWLiP--GpaVTRAPSPNVNARPAGTQ--ISLLVIHNISLPPSQFGG------PYVADLFLNRLDYSADPWLE 72 
187476959  13 LPQLDRHGWLhP--AptVTLLPSPNVDARPPGAQ--VSLLVLHNITLPPGEFGG------PYVADLFLNRLDLNAHPWFA 82 
163858647   2 YLQLDRHGWLaPapG--VRLLPSPNCDARPAGLP--VSLLVIHNISLPPGRFGG------PHVAGLFQNRLDYTAHPWFE 71 
300309720  10 AWSIDGEGWC-Q--G--ARREPSPNCDDRPEGVV--SQLLVIHNISLPPGEFGG------SYIADLFCNRLDFDAHPYFD 76 
152980729  13 AFQIDAAGWA-V--G--AQHLPSPNFDARVEGTE--IALLVIHNISLPPGQFGG------PFIADLFLNRLDYEADPYFD 79 
304310411   6 PTFAVQNGRL-T--S--ARQVSSPNFNARPEPHE--ISLLVIHCISLPPAQYSG------DAIERFFMNQLDATEHPYFE 72 
134095934   1 -----------M--D---------------------ISLLVIHNISLPPEQFGG------PFIADLFLNQLDYAADPYFE 40 
296112740  78 GIHTLKVSAHLFIERNGSVTQFVNFNDRAWHAGQSAYLGRQNCNDFTIGIELEGADDIPFEAVQYQALGQIIVAIYDAYP 157
33599494   73 RLRGLHVSAHFFIRRDGAIIQFAATEARAWHAGVSRFRGRDNCNDFSIGIELEGTDILPYADAQYAMLARLAQVLRARYP 152
33595206   73 RLRGLHVSAHFFIRRDGAIIQFAATEARAWHAGVSRFRGRDNCNDFSIGIELEGTDILPYADAQYATLARLAQVLRARYP 152
33591337   73 RLRGLHVSAHFFIRRDGAVIQFAATEARAWHAGVSRFRGRDNCNDFSIGIELEGTDILPYADAQYATLARLAQVLRARYP 152
187476959  83 RLKGLRVSAHFFVRRDGNIVQFASIHDRAWHAGVSRFAGRERCNDFSVGVELEGTDRLPYTDAQYTTLSKLARRLRARLP 162
163858647  72 RLRGLRVSAHFFINRQGEIVQFVATEARAWHAGVSRFGKRERCNDFSLGVELEGTDTLPYTDAQYTALAKLARLLGSRYP 151
300309720  77 QLRPLRVSAHFLIRRDGEVVQFVPAHRRAWHAGVSSFEGRERCNDFSIGIELEGTDFTPFTPAQYDALLGLSQALVSRYG 156
152980729  80 QLRPLRVSAHFLIRRDGTVMQFVSANDRAWHAGASSFCGQERCNDFSIGIELEGTDFEAFADEQYAALAALTVALKAAYP 159
304310411  73 TIADLQVSAHLLIRRDGEVVQFVDFDQRAWHAGKSCFEGRENCNDYSIGIELEGTDTDEYTEHQYAALAAITKVLMQAHP 152
134095934  41 QLKLLRVSAHFLIRRDGNVMQFVSARDRAWHAGASSFCGQERCNDFSIGIELEGTDFQPFEEAQYIALASLTVALKQAYP 120
296112740 158 AT-RRHLMGHSDIAPHRKTDPGKYFDWQKLRTLVA 191
33599494  153 L---ADARGHEHIAPGRKTDPGRAFNWVRFGRESG 184
33595206  153 L---ADARGHEHIAPGRKTDPGRAFNWVRFGRESG 184
33591337  153 L---ADARGHEHIAPGRKTDPGRAFNWVRFGRESG 184
187476959 163 I---RAAWGHEDIAPGRKTDPGPAFDWPRFARGAG 194
163858647 152 L---RAAWGHEHIAPGRKTDPGPAFNWTRFGRMAG 183
300309720 157 L---SAVAGHEHIAPLRKTDPGPFFDWQRYREEMM 188
152980729 160 LL---HVTGHEHIAPGRKTDPGPFFDWAGYEERYL 191
304310411 153 KLtPARIAAHSTIAPERKTDPGPGFDWPRYLRLIV 187
134095934 121 L---RHVSGHEQIAPGRKTDPGPFFNWTEYQALYR 152
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