1BKE,1BKE,1BKE


Conserved Protein Domain Family
ALBUMIN

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cd00015: ALBUMIN 
Click on image for an interactive view with Cn3D
Albumin domain, contains five or six internal disulphide bonds; albuminoid superfamily includes alpha-fetoprotein which binds various cations, fatty acids and bilirubin; vitamin D-binding protein which binds to vitamin D, its metabolites, and fatty acids; alpha-albumin which binds water, cations (such as Ca2+, Na+ and K+), fatty acids, hormones, bilirubin and drugs; and afamin of which little is known; these belong to a multigene family with highly conserved intron/exon organization and encoded protein structures; evolutionary comparisons strongly support vitamin D-binding protein as the original gene in this group with subsequent local duplications generating the remaining genes in the cluster
Statistics
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PSSM-Id: 237982
Aligned: 59 rows
Threshold Bit Score: 149.783
Created: 1-Nov-2000
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
binding sitebinding site
Conserved site includes 6 residues -Click on image for an interactive view with Cn3D
Feature 1:binding site
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                      
1BKE       386 KQNCELFeqLGEYKFQNALLVRYTKKVPQVSTPTLVEVSRNLGKVGSKCCkhpe-akrmPCAEdYLSVVLNQLCvlhekt 464  human
1BKE       194 RLKCASLqkFGERAFKAWAVARLSQRFPKAEFAEVSKLVTDLTKVHTECChgd----llECAD-DRADLAKYICenq--d 266  human
1BKE         2 SEVAHRFkdLGEENFKALVLIAFAQYLQQCPFEDHVKLVNEVTEFAKTCVade---saeNCDKsLHTLFGDKLCtvatlr 78   human
113581     411 KKMCAAEaaVSDDSFEKSMMVYYTRIMPQASFDQLHMVSETVHDVLHACCkdeqghfvlPCAEeKLTDAIDATCddydps 490  Atlantic salmon
AAB27041   619 HRLCLDAhqLGEEKLADRIMIGLAQRISVASFVNISSVALHFAQSVIKCCdad---hekTCFMeQEFALEDQVCsdseal 695  sea lamprey
S59517     417 KSNCDSYkeLGDYFFTNEFLVKYSRMMPQAPTSFLIELTEKVGKVAEKCCnlds-nhqvSCALeNTDKVMGSICkyhnkh 495  monocled cobra
AAC63407   146 AQLCSSLqaLGAQKFLGRMVLVFSQRAPNATFDQISKLSHRFHSYAQTCCgeg---wspGCFAeQRHLIHDEMChdmeal 222  sea lamprey
3023295     39 SRLCGGLngLGEDAYRSHCVVYYTKRMGVVSLDHVEELANHCLRIVKQCCaeg---aadDCLQtELAAVQEQVCtrmsea 115  sea lamprey
3023295    436 DWWCRMSdlLGTDRFNLLLIVTYSQRVPQATFEQVEEISHHFALITRKCCshr---kngSCFLeERYALHDAICrdeawl 512  sea lamprey
3023295    241 QNLCKALksLGKEKFEDRIIVRFTQRAPQAPFELIQKLAHRFEVLAEKCCelg---hsdRCLVeERYTVDDELCleqsfv 317  sea lamprey
Feature 1                                                                    #  ##  #          
1BKE       465 pvSDRVTKCCTESLVNRRPCFSALEvdetyvpke-----fnaetftfhADICTLSEKERQIKKQTALVELVKHKPKaTKE 539  human
1BKE       267 siSSKLKECCEKPLLEKSHCIAEVEndempadlp-----slaadfvesKDVCKNYAEAKDVFLGMFLYEYARRHPDySVV 341  human
1BKE        79 etYGEMADCCAKQEPERNECFLQHKddnpnlp---------rlvrpevDVMCTAFHDNEETFLKKYLYEIARRHPYfYAP 149  human
113581     491 siNPHIAHCCNQSYSMRRHCILAIQpdteftppe-----ldassfhmgPELCTKDSKDLLLSGKKLLYGVVRHKTTiTED 565  Atlantic salmon
AAB27041   696 shIPSVSRCCELHPFDRSVCFHSLRstqastlasthvavgkddslpghVEECQAFASGNHSLTDQVMFEFARRHPRaSVS 775  sea lamprey
S59517     496 fiNDQICHCCNSSFISRWECISNLGpdlsfvppt-----fnpktmdnpEKLCSTSEDTVQKSKKGLLSELVKSKPNiSEE 570  monocled cobra
AAC63407   223 srVPAMAKCCQISGSARAKCMETIPrgkpvldv--------alarfdgHKVCQMNAEAPQELLGRMLYEFGRRHTDaSVG 294  sea lamprey
3023295    116 kdVPLVGRCCALAGSERHDCFHHAGgvaegegawphalpvtsppeydsVTVCALHATANARLYDTLLWEFSRRYPSaSDS 195  sea lamprey
3023295    513 sgLAEVSRCCAMDGRARILCFDELSshlnasve--------erpelcsTSLCSKYHDLGFEFKQRVAYGFGQRFPKaAMG 584  sea lamprey
3023295    318 atCPRLSSCCSLSGSSRAQCLETVPvletsdkas------patptlpiSEQCTLWAGKPVEFHKRVVWQISHRYPTtGVA 391  sea lamprey
Feature 1           #  #                          
1BKE       540 QLKAVMDDFAAFVEKCCKA--DDKETCFAEEGKKL 572  human
1BKE       342 LLLRLAKTYETTLEKCCAA--ADPHECYAKVFDEF 374  human
1BKE       150 ELLFFAKRYKAAFTECCQA--ADKAACLLPKLDEL 182  human
113581     566 HLKTISTKYHTMKEKCCAA--EDQAACFTEEAPKL 598  Atlantic salmon
AAB27041   776 QVESLARLYSELARACCALtdADQESCLHTARSQA 810  sea lamprey
S59517     571 ELAATILTFREIQKLCCEA--ENKKECFDKKGQEM 603  monocled cobra
AAC63407   295 EAKKIITEWMDGVKDCCAGnhSEEQACLVSKKAAI 329  sea lamprey
3023295    196 HLIALANEFITGLTTCCLVe-EEHGACLATLREDF 229  sea lamprey
3023295    585 QMRDLISKYLAMVQRCCDA--MSDFKMDVEEVELR 617  sea lamprey
3023295    392 QVEALAHHYLEHLTICCAS--EDKDTCIATEVAEF 424  sea lamprey

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