1RFN,1APQ,1EMN,1HAE,1YUF,1GL4,1XDT,1G1T


Conserved Protein Domain Family
EGF

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cd00053: EGF 
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Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium.
Statistics
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PSSM-Id: 238010
Aligned: 862 rows
Threshold Bit Score: 25.1298
Created: 1-Nov-2000
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1RFN_B       2 TCni--knGRCE--QFCKNsa---dnKVVCSCT-EGYRLaen----qkSCE 40   human
2494288    485 ECvt--nqHNCDenALCFNtv----gGHNCVCK-LGYTGng------tVCK 522  chicken
CAC38842  2249 ACq----hSLCHndGVCHNtn----pGFFCECRnDGLKGa--------RCQ 2283 Caenorhabditis elegans
NP_506228  711 ECqr--gdHNCDqhAKCTNrp----gSFSCQCL-QGYQGdg------rSCI 748  Caenorhabditis elegans
1174423     77 KCpetfdaWYCLndAHCFAvkiadlpVYSCECA-IGFMGq--------RCE 118  fruit fly
AAD25092   262 ACas---tNLCLngANCRNann--hhGFSCECA-EEFHGe--------YCQ 298  Caenorhabditis elegans
AAF58809  1000 NCln--npTLCDmnAQCRStn----sGLVCVCN-QGFFGng------sLCQ 1037 fruit fly
128199     671 PCyi--gtHGCDtnAACRPgp---rtQFTCECS-IGFRGdg------rTCY 709  human
NP_506228  835 ACg----sYVCDvnAECMPep---sgGSECVCK-AGFSGng------vTCE 871  Caenorhabditis elegans
1711488    205 ECasa-ddNDCDpnANCTNta----gSFTCECDtELYDNspnteepgrVCI 250  Strongylocentrotus purpuratus
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