1XYF,1ABR,1HWM,2AAI,1CE7,2AAI,1HWM,1ABR,1CE7,1DQG


Conserved Protein Domain Family
RICIN
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cd00161: RICIN (this model, PSSM-Id:238092 is obsolete and has been replaced by 467293)
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Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture.
Links
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Statistics
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PSSM-Id: 238092
Aligned: 104 rows
Threshold Bit Score: 33.2479
Created: 1-Nov-2000
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
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Q-X-W motifputative sugar
Conserved site includes 9 residues -Click on image for an interactive view with Cn3D
Feature 1:Q-X-W motif
Evidence:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
Feature 1                                                ###                                   
1XYF_A     313 GQIKGVg---sGRCLDVPnast--tdgTQVQLYDCHsa--tNQQWTYTd---AGELRVy----gDKCLDAAgtg----ng 374  Streptomyces oli...
1HWM_B      13 RRIVGRd----GLCVDVRngyd--tdgTPIQLWPCGtq--rNQQWTFYn---DKTIRSm-----GKCMTANgln----sg 72   Sambucus ebulus
1HWM_B     142 TLIVGYn----EMCLQANge------nNNVWMEDCDvt-svQQQWALFd---DRTIRVnn--srGLCVTSNgyv----sk 201  Sambucus ebulus
BAB85111   726 TYVRIVnr-asDKCMDIPgngsdmvngTDVILYDCErd-awDQRWSFDa---DKRMFSnka-npSLCLDNRgqay---ne 796  Shewanella algae
BAB39313   189 VYIRIKnr-aqDEYLTVTgnla-dtraTSVCISPYSgk--dTQIWHYC----RGLFKSka---sDTCLDVIggrd--tpg 255  crab-eating macaque
Q9Y4K1    1588 IYFRLRnk-atGLFMSTNgnl---edlKLLRIQVMEdvgadDQIWIYQ----EGCIKCri--aeDCCLTIVgslv--tsg 1655 human
BAB13774   419 GDYNIFnldlpNQVVDFSnqp----dlLVHGHEFCDn---eNQTWHFTynstYHAYKIwsgrksNLLLTWDsnat--ske 489  cabbage butterfly
5902922    267 GEFMIEsikdkNSFLDLSkn-----vnGGVIHSNLYsg-gdNQIWVFSyddnKKAYRIqs--yqNSYLYLSwdsnasske 338  Pieris rapae
5902922    570 GDYNIFndnfpNIAIDFTnq-----egSLIHGHNFCsn--nNQKWSFVfdgkRKAYRIksgvrsNLWLSWDsnas--ske 640  Pieris rapae
282374     730 GYFNISskknfNKIITMNsn-----ktQAVIFDNIGi---nNQSWKLKyndnKNAYQIhil-dnFLYFQGGhn------- 793  Bacillus sphaericus

Feature 1                     ###                                                   ###  
1XYF_A     375 tKVQIYSCWg--GDNQKWRLNsd-----gSIVGVq-sGLCLDAVgggt-angtLIQLYSCsng----snQRWTR 435  Streptomyces olivaceov...
1HWM_B      73 sYIMITDCStaaEDATKWEVLid-----gSIINPs-sGLVMTAPsgas--rttLLLENNIha-----asQGWTV 133  Sambucus ebulus
1HWM_B     202 dLIVIRKCQg--LATQRWFFNsd-----gSVVNLk-sTRVMDVKesdv--slqEVIIFPAtgn----pnQQWRT 261  Sambucus ebulus
BAB85111   797 gEIVVWECVd--SDNLRWDYDg------rFIRSAhdaNIVADAYgrg---ndaQVGQWQFhgg----anQQWLL 855  Shewanella algae
BAB39313   256 aKVALWTEHg--QFRQKWRLNqn-----gTISSYlsdQLVLDVKggny-cdktHVIVNQPleg---eetQKWDI 318  crab-eating macaque
Q9Y4K1    1656 sKLGLALDQn--ADSQFWSLKsd-----gRIYSKlkpNLVLDIKggtq-ydqnHIILNTVske---kftQVWEA 1718 human
BAB13774   490 mVVRAYTESr--SKNQYWRIEqtgs-ksyKLRNLensNMILGLTnvstsygglNLMVQDDsngn-snlhSDWDI 559  cabbage butterfly
5902922    339 mILRGYTNSg--SNNQYWQIEqtg--knyRLRNLlnlDMIITAQdkpsafggkEVIVNTEisnsntkisQEWKM 408  Pieris rapae
5902922    641 mVLRAYTESg--SSNQYWRLDeand-gsyRIRNLqdyYKLIALTnkntpyggkELIVSDNke-----sgNTWYL 706  Pieris rapae
282374     794 iVATMRNVTn-dDLRSYWYVEynfnkdgfIIRNAfdtSYVLDVFqgnf-anntPIITYQNyln----dnQLWNF 861  Bacillus sphaericus

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