1ZFJ,1EEP,1NFB,1PVN,1VRD,2CU0


Conserved Protein Domain Family
IMPDH

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cd00381: IMPDH 
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IMPDH: The catalytic domain of the inosine monophosphate dehydrogenase. IMPDH catalyzes the NAD-dependent oxidation of inosine 5'-monophosphate (IMP) to xanthosine 5' monophosphate (XMP). It is a rate-limiting step in the de novo synthesis of the guanine nucleotides. There is often a CBS domain inserted in the middle of this domain, which is proposed to play a regulatory role. IMPDH is a key enzyme in the regulation of cell proliferation and differentiation. It has been identified as an attractive target for developing chemotherapeutic agents.
Statistics
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PSSM-Id: 238223
Aligned: 71 rows
Threshold Bit Score: 232.023
Created: 3-Feb-2005
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
active site
Conserved site includes 14 residues -Click on image for an interactive view with Cn3D
Feature 1:active site [active site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                    #                                   
1ZFJ_A        11 GYTFDDVLLIPAESHVl-PNEVDLKTKLAd----nLTLNIPIITAAXDTVTGSKXAIAIARA-GGLGVIHKNXsi-teQA 83  Streptococcus p...
BAB77575      14 AYGIDEIALVPGNRTLd-PSLADTRWKIGn-----IEREIPIIASAMDGVVDVKMAVRLSQL-GALGVINLEGiq-trYA 85  Nostoc sp. PCC ...
BAC17419      43 TYSLDDIAVVASRRTRs-SKDVDTNWHIDa-----YKFELPFMNHPTDALASPEFVIEMGRQ-GGLGVINAEGlw-grHA 114 Corynebacterium...
NP_787204     23 AFSLDEVAVVPSRRTRh-SSEVSIEWKMDa-----FSFDTPIISSPADSVVSPSTIVELSEF-GCLGILDLEGvw-trYE 94  Tropheryma whip...
NP_902592      5 ELNYGDVYLVPKKTVVdsRKECDTSVQFGp-----RRFAMPVYPSNMKSVVSAETCELFARE-GWFYTLHRFNv---dAV 75  Chromobacterium...
BAD55741      69 TYELDDVDIVPSRRTRs-SKQVSLAWQLDa-----YRFEIPLVAHPTDALVSPRSAVELGRL-GGLGVINGEGlw-arHA 140 Nocardia farcin...
P65172        13 DLTYNDVFIVPNRSEVasRFDVDLSTADG------SGTTIPVVVANMTAVAGRRMAETVARR-GGIVILPQDLpi-paVK 84  Mycobacterium t...
NP_001025529   9 KLDFKDVLLRPKRSTLksRSEVELTRSFTfrnsgqSYQGIPIIAANMDTVGTFEMARALCKF-SLFTAVHKHY-----TV 82  western clawed ...
YP_466341     13 ELSLEDVFLVPSYFDGgsRLEVDLRPVDF------PGGSHPVVSANMNAVTGKRMAETMARL-GGIGVLPQDMsl-etAA 84  Anaeromyxobacte...
XP_001113210   9 KLDFKDVLLRPKRSTLksRSEVDLTRSFSfrnskqTYTGVPIIAANMDTVGTFEMAKVLCKVpGSFWDVPQMGcvfliYK 88  rhesus monkey
Feature 1                                                                                        
1ZFJ_A        84 EEVRKVKrsengviidpffltpehkvseaeelxqryrisgvpivetlanrklvgiitnrdxrfisdynapisehxtsehl 163 Streptococcus p...
BAB77575      86 DPEPILDrissvgkdefvslmqelya------------------------------------------------------ 111 Nostoc sp. PCC ...
BAC17419     115 DLDAAIAtvlaayegdggregaleiigggdqaaa---------------------------------------------- 148 Corynebacterium...
NP_787204     95 NPEPVLReisalpeekaclglqkiys------------------------------------------------------ 120 Tropheryma whip...
NP_902592     76 AFTRYMQe------------------------------------------------------------------------ 83  Chromobacterium...
BAD55741     141 DVETKIEqltelaaqgrfdravallqql---------------------------------------------------- 168 Nocardia farcin...
P65172        85 QTVAFVKsrdlvldtpvtlapddsvsdamalihkrahgvavvilegrpiglvressclgvdrftrvrd-------iavtd 157 Mycobacterium t...
NP_001025529  83 DEWKDFAassp--------------------------------------------------------------------- 93  western clawed ...
YP_466341     85 RIIQHIRsadprhdtplsvspratlrdvqgiirkrahdmvvvvdderrpvgivthadlrdqdqyspaas------fmssr 158 Anaeromyxobacte...
XP_001113210  89 LFTLKWKmlllsvllpasilvaekfslf---------------------------------------------------- 116 rhesus monkey
Feature 1                                                                                        
1ZFJ_A       164 vtaavgtdletaerilhehrieklplvdnsgrlsglitikdiekviefphaakdefGRLLVAAAVGvt-sdTFERAEALF 242 Streptococcus p...
BAB77575     112 --------------------------------------epikpelitkriqeikeqGGIAAVSATPv---gASKYGEVVA 150 Nostoc sp. PCC ...
BAC17419     149 -----------------------------tralqqlhaapldtdllaerigqvrdsGEIVAVRVSPq---nARELAPVVA 196 Corynebacterium...
NP_787204    121 --------------------------------------epikrhllerrlqelrdaGVIVAGCLSPq---tTNALYKSVI 159 Tropheryma whip...
NP_902592     84 --------------------------------------------------------QGLFASISVGvn-ddTYEQLDALK 106 Chromobacterium...
BAD55741     169 ------------------------------------haapmqpdllaaavaevraaGVTVAVRVSPq---nARTLTPALL 209 Nocardia farcin...
P65172       158 yvtapagteprkifdllehapvdvavltdadgtlagvlsrtgairagiytpatdsaGRLRIGAAVGin-gdVGAKARALA 236 Mycobacterium t...
NP_001025529  94 -----------------------------------------------------dclENVAVSSGTGq---sDFQHLEEVL 117 western clawed ...
YP_466341    159 lvtipvgtpnreaflrmeeqrvkaapvvdaagrlvgvltrddavrlellapaldpaGRLMIAAAVGis-adAATTAARLA 237 Anaeromyxobacte...
XP_001113210 117 ------------------------------------tavhkhysleewqefagqnpDCLEHLAASSgtgasDFEQLEQIL 160 rhesus monkey
Feature 1                                                                                ###     
1ZFJ_A       243 EAGa-----DAIVIDTAHGhs--aGVLRKIAEIRAHFp-nRTLIAGNIaTAEGARALYdagVDVVKVGIGPGSICTTRvv 314 Streptococcus p...
BAB77575     151 KAGadlffiQATVVSTAHLspesvVPLDLAEFCRSMP---IPVILGNCvTYEVTLNLLkagAAAVLVGIGPGAACTSRgv 227 Nostoc sp. PCC ...
BAC17419     197 RAGadllviQGTLISAEHVnt-ggEPLNLKEFIGSIE---LPVIAGGVyDYTTALHMMrtgAVGIIVGGGENTNDLAL-- 270 Corynebacterium...
NP_787204    160 SAGvdifviRGGTVSAEHVsk-sdNVLNLKRFIYELD---VPVMVGGVaTYTAALHMMrtgAAGVLVGFGGCAGSTNHas 235 Tropheryma whip...
NP_902592    107 AAGls---pEYMTLDIANAwc--vKAERMIKHIKQHFp-nTFLIGGNVaTAEAARDLEawgCDAIKAGIAGGRVCITKnk 180 Chromobacterium...
BAD55741     210 QAGidllvvHGTIISAEHVgd--gEPLNLKTFIAELD---VPVVAGGVsDHRTALHLMrtgAAGVIVGYGSYPGATTTge 284 Nocardia farcin...
P65172       237 EAGv-----DVLVIDTAHGhq--vKTLDAIKAVSALDl-gLPLAAGNVvSAEGTRDLLkagANVVKVGVGPGAMCTTRmm 308 Mycobacterium t...
NP_001025529 118 SAIpq---lRYICLDVANGys--eQFVQHVKDVRARFp-kHTIMAGNVvTGEMVEELIlsgADIIKVGIGPGSVCTTRkk 191 western clawed ...
YP_466341    238 ELGa-----AAIVLDTAHGhq--rRMIEAIREVRRAVgdrLPLVAGNVcTPEGTRDLLeagADVVKVNVGPGAMCTTRmq 310 Anaeromyxobacte...
XP_001113210 161 EAIpq---vKYICLDVANGys--eHFVEFVKDVRKRFp-qHTIMAGNVvTGEMVEELIlsgADIIKVGIGPGSVCTTRkk 234 rhesus monkey
Feature 1                                           # #                    ##                    
1ZFJ_A       315 -aGVGVPQVTAIYDAAAVARey-------gKTIIADGGIKySGDIVKALAAGgNAVXLGSXFAGTDeapgete-iyqgrk 385 Streptococcus p...
BAB77575     228 -lGVGVPQATAIADCAAARDdyyqe-tgnyIPIIADGGLItGGDICKCIACGaDGVMIGSPFARAAeap----------g 295 Nostoc sp. PCC ...
BAC17419     271 --GMEVPMATAIADVAAARRdyldetggryVHIIADGEIDnSGDVVKAIACGaDAVVLGSPLARAKeaa----------g 338 Corynebacterium...
NP_787204    236 -lGIKVPMATAIADVAAARKdyldesggryVQVIADGSMNtSGMAVNALALGaDAVMMGTPLVRSTtsp----------g 304 Tropheryma whip...
NP_902592    181 -tGFHRPMVSTVRDCVAAVT----------IPVIADGGIVeHGDIAKALVCGaTMVMAGSLFAGYDesagdiv-eiagkh 248 Chromobacterium...
BAD55741     285 vlGIGVPMATAIADAAAARRdyldetggryVHVIADGDIAtSGQLAKAIACGaDAAMLGVPLAVAAeap----------g 354 Nocardia farcin...
P65172       309 -tGVGRPQFSAVLECASAARql-------gGHIWADGGIRhPRDVALALAAGaSNVMIGSWFAGTYespgdlmrdrddqp 380 Mycobacterium t...
NP_001025529 192 -tGVGYPQLSAVIECADAAHgl-------nGHIISDGGCScPGDVAKAFGAGaDFVMLGGMLSGHTecggeti-ekngkk 262 western clawed ...
YP_466341    311 -tGAGRPTFTSVLACAREAHrr-------gRHVWADGGVRdPRDVALYLAAGaSRVMIGTALAGTYespgdvkedregrp 382 Anaeromyxobacte...
XP_001113210 235 -tGVGYPQLSAVMECADAAHgl-------kGHIISDGGCScPGDVAKAFGAGaDFVMLGGMLAGHSesggeli-erdgkk 305 rhesus monkey
Feature 1           # ###                               ##                                       
1ZFJ_A       386 yKTYRGXGSiaaxkkgssdryf-----qgsvneanklvpEGIEGRVAykg----aaSDIVFQXLGGIRSGXGYVGagdIQ 456 Streptococcus p...
BAB77575     296 rGFHWGMATpspvlprg--------------trirvgttGTLEQILTgpa----glDDGTHNLLGALKTSMGTLGakdIK 357 Nostoc sp. PCC ...
BAC17419     339 kGYFWPAVAahprfprglv----------tdsgyltdevPSLEQILKgps----tlPWGVENFSGGLKRAMAKCGftdLK 404 Corynebacterium...
NP_787204    305 fGYHWGREAhhmtlprg--------------rrayigqtASLQEIIQgpg----hsPDGTVNFAGAIRRAVALAGfqdLK 366 Tropheryma whip...
NP_902592    249 yKEYFGSASqfnkg--------------------ayvnvEGKKILVEykg----smGKLLRELQEDLQSSVSYAGgttLA 304 Chromobacterium...
BAD55741     355 rGWYWPSAAahpsvprgsllqvgdgwdlgaedeadeaarPPLERVLFgps----ddPFGSLNLVGGLRRSMAKAGysdLK 430 Nocardia farcin...
P65172       381 yKESYGMASkravvartgadn-------pfdrarkalfeEGISTSRMgldpdrggvEDLIDHITSGVRSTCTYVGasnLA 453 Mycobacterium t...
NP_001025529 263 yKLFYGMSSetamkkhag-------------gvaeyrasEGKTVEVPfqg----dvEHTVKDILGGIRSTCTYVGagkLK 325 western clawed ...
YP_466341    383 yKENYGMASaravsdrtagid-------pferakkgffrEGISTSRIyiregresvGAILVDVITGVQSAFTYAGaasLP 455 Anaeromyxobacte...
XP_001113210 306 yKLFYGMSSemamkkyag-------------gvaeyrasEGKTVEVPfkg----dvEHTIRDILGGIRSTCTYVGaakLK 368 rhesus monkey
Feature 1                   
1ZFJ_A       457 ELHENaQFVEX 467 Streptococcus pyogenes
BAB77575     358 EMQQVeVVIAP 368 Nostoc sp. PCC 7120
BAC17419     405 SFQKVpLHFNG 415 Corynebacterium efficiens YS-314
NP_787204    367 NFQRVeMVVIQ 377 Tropheryma whipplei str. Twist
NP_902592    305 ALREVeMIQVY 315 Chromobacterium violaceum ATCC 12472
BAD55741     431 EFQKVgLSVRA 441 Nocardia farcinica IFM 10152
P65172       454 ELHERaVVGVQ 464 Mycobacterium tuberculosis
NP_001025529 326 ELSRRtTFIRV 336 western clawed frog
YP_466341    456 EFHRKaVVGVQ 466 Anaeromyxobacter dehalogenans 2CP-C
XP_001113210 369 ELSRRtTFIRV 379 rhesus monkey

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