Conserved Protein Domain Family
RNase_T2_prok

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cd01062: RNase_T2_prok 
Ribonuclease T2 (RNase T2) is a widespread family of secreted RNases found in every organism examined thus far. This family includes RNase Rh, RNase MC1, RNase LE, and self-incompatibility RNases (S-RNases). Plant T2 RNases are expressed during leaf senescence in order to scavenge phosphate from ribonucleotides. They are also expressed in response to wounding or pathogen invasion. S-RNases are thought to prevent self-fertilization by acting as selective cytotoxins of "self" pollen. Generally, RNases have two distinct binding sites: the primary site (B1 site) and the subsite (B2 site), for nucleotides located at the 5'- and 3'- terminal ends of the sessil bond, respectively. This CD includes the prokaryotic RNase T2 family members.
Statistics
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PSSM-Id: 238513
Aligned: 22 rows
Threshold Bit Score: 164.087
Created: 6-Mar-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1:Active site [active site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                    #  # #                             
NP_385281    66 FDFYVLSLSWSPTWCdandpkgksd--------qcetgsghgLIVHGLWPQnen-----gyPEYCrtrh----------- 121 Sinorhizobium me...
ZP_00089393 117 QDSYVLAITWQPGFCehklakskskqkpecramesgelnianFTLHGLWPNkkec---gknYGNCsrtd----------- 182 Azotobacter vine...
NP_418850    57 IAAYLLALYWSPEACragipesdka--------iqceanrfgFTVHGLWPNgpd----rvhPRYCrss------------ 112 Caulobacter cres...
ZP_00304448  47 ITGYTLAASWSPEFCrtrkddprhat------qcsgkhgrfgFVLHGLWPEgrd----gqfPQYCpsr------------ 104 Novosphingobium ...
NP_873373    87 VDYYMLALSWSPAFCatqkaryltdlpd--hidyqcddqnlgWVIHGLWPQnkkahsisdhPRYCqgdl----------- 153 Haemophilus ducr...
ZP_00146473  51 TGQRVLMIEMTPALCslqptrsrm----------rqclegysLTVSGLDMGy---------GERCgrgs----------- 100 Psychrobacter sp...
NP_386308    41 RTEYVLAVSWQPGFCetwpdrkecig------qtaerfdatnFSLHGLWPLk---------KSYCgveadlkardrkgdw 105 Sinorhizobium me...
NP_103159    91 KPEYVFALSWQPAFCetkssktecra------qnpsefdatnFTLHGLWPQpn-------gNFYCqvaasdkandnpahw 157 Mesorhizobium lo...
ZP_00268504 135 TSAFVLALSWQPAFCegrptkpecas------qtadrldadhFALHGLWPQpr-------gRAYCgvdaaavaldkegaw 201 Rhodospirillum r...
ZP_00328395 144 ARKYVLAISWQPSFCqtrqyipecis------qttdrydannFTLHGLWPDk---------LTYCgvsnqdinndkqrew 208 Trichodesmium er...
Feature 1                                      ##  ##                                           
NP_385281   122 ----sdrvPESLGRQYFDLip----sMGLIGHQWRKHGTCSg----lSQRDYFAVTRAAHerLTIPPELTTadg------ 183 Sinorhizobium me...
ZP_00089393 183 -----iqlSEETLSYIKPWmpnfyfeNDFGNYEWKKHGTCQtd---mDDDAYFRKAVTAVrtVNDSELGQYiranigknv 254 Azotobacter vine...
NP_418850   113 -----ppmRVKTVKANLCMtp----sPWLLQHEWQAHGTCNw----kTPEAYFKKTRQIRerLDVPDLDPGadgtm---- 175 Caulobacter cres...
ZP_00304448 105 -----rlpDAQTLRRNFCTtp----sADLMMHEWARHGTCMs----aDPAAYFDKGRALFqsLRFPDMARLsrtpg---l 168 Novosphingobium ...
NP_873373   154 -----ppiDPAILEQYLPEap----gASLLQGEWEKHGACAf----qDPTSYFQKQKELFysLKLPAKNLRkn------- 213 Haemophilus ducr...
ZP_00146473 101 ----epriTPLQLKVVNRImp----dTTVRTQAWQRYGACSp----lSSSNYFRQIINYAgaLKLPNELNTgnsyt---v 165 Psychrobacter sp...
NP_386308   106 lelpevdmGDETAKRLLVAmpg--vkSGLDRHQWLRNGTCQt----aNAEDYFALQLRLLdeLNRSAVRALfadaigkel 179 Sinorhizobium me...
NP_103159   158 kdlppvnlDAGTRKELDQVmpg--taSQLERHEWIKHGTCYg----kSQQEYFSDALGLMrqVNASPVRDLfaktiggkl 231 Mesorhizobium lo...
ZP_00268504 202 drlpavalSEPTRRALVRAmpg--taSFLDRHEWIKHGTCAdagagpGAEAYYAASLALLeaINASPVRALvagriggrl 279 Rhodospirillum r...
ZP_00328395 209 ddlprlnlDQETTSELAIVmpg--vqSYLHRHEWTKHGTCDg----rDEDTYYDVSIDLLneVNASEVQDLftenigkri 282 Trichodesmium er...
Feature 1                                                                                       
NP_385281   184 -aesLSVQAIEAAFEKknsgmtsesIAVTCEg------rLLEEIRICFdke----------lkFRACPqvd--------- 237 Sinorhizobium me...
ZP_00089393 255 errtLQEILRRTHPDApd------sFAFLCTd------nRLHEIQVHLpv------------dFREGPtlagligprpsr 310 Azotobacter vine...
NP_418850   176 tageIRQAFIARNPGVpa-----qgLNVRIKq------gRLTEVWVCMdlk----------fkWAACRgg---------- 224 Caulobacter cres...
ZP_00304448 169 daskMREAMSVANPQLrpd----miRLLLGRd------gWLREVHVCLsrr----------mkPARCPgg---------- 218 Novosphingobium ...
NP_873373   214 ---dLFQWMRKHNPQLk--------GVYLGA--------SVTELYICYdkk----------wqPINCPkkgertai---q 261 Haemophilus ducr...
ZP_00146473 166 lksrFIGQMTSLNNGMtp-----anIDLICQagtq-rqmILTDVHVCYeg-----------skFGNCHnv---------- 218 Psychrobacter sp...
NP_386308   180 dekqIKQAFDQGFGAGag-----drVRMRCQsvn--grdVITGLTIGLsgdlsgk--aeladlIQAAGpt---------- 240 Sinorhizobium me...
NP_103159   232 tadqIRGAFDTAFGAGag-----drVRVSCVidpsngrrLIGELTLGLagpigpn-aslkdllLASVPtn---------- 295 Mesorhizobium lo...
ZP_00268504 280 etadLRQAFDAAFGAGag-----qrVSVSCVrdg--grsLIGEIKLALagplgpevagvlaarIAAVPpv---------- 342 Rhodospirillum r...
ZP_00328395 283 tqsqIETAFDNSFGKGag-----qsVKIKCNg------gLISELQIKMrrplv-----geklrDVLIPts---------- 336 Trichodesmium er...
Feature 1                       
NP_385281   238 -----rqACrrdTVSL 248 Sinorhizobium meliloti 1021
ZP_00089393 311 thgptpgECsqeRILI 326 Azotobacter vinelandii
NP_418850   225 -----ngPAdavVAAV 235 Caulobacter crescentus CB15
ZP_00304448 219 -----tkPAdtvPVKI 229 Novosphingobium aromaticivorans DSM 12444
NP_873373   262 alnyvnlKCk-yNAQL 276 Haemophilus ducreyi 35000HP
ZP_00146473 219 -----vdNCg-sKFVI 228 Psychrobacter sp. 273-4
NP_386308   241 -----efKCakgIADA 251 Sinorhizobium meliloti 1021
NP_103159   296 -----kaGCpigTVDA 306 Mesorhizobium loti MAFF303099
ZP_00268504 343 -----dpGCpggIVDA 353 Rhodospirillum rubrum
ZP_00328395 337 -----gsSCssgIVDP 347 Trichodesmium erythraeum IMS101

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