1J8F,1Q14


Conserved Protein Domain Family
SIRT1

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cd01408: SIRT1 
Click on image for an interactive view with Cn3D
SIRT1: Eukaryotic group (class1) which includes human sirtuins SIRT1-3 and yeast Hst1-4; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation. Sir2 proteins have been shown to regulate gene silencing, DNA repair, and life span. The most-studied function, gene silencing, involves the inactivation of chromosome domains containing key regulatory genes by packaging them into a specialized chromatin structure that is inaccessible to DNA-binding proteins. The nuclear SIRT1 has been shown to target the p53 tumor suppressor protein for deacetylation to suppress DNA damage, and the cytoplasmic SIRT2 homolog has been shown to target alpha-tubulin for deacetylation for the maintenance of cell integrity.
Statistics
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PSSM-Id: 238699
Aligned: 17 rows
Threshold Bit Score: 353.474
Created: 10-Jan-2006
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 11 residues -Click on image for an interactive view with Cn3D
Feature 1:substrate binding site [chemical binding site]
Evidence:
  • Comment:by similarity to Archaeoglobus fulgidus Sir2 homolog, Sir2_Af2, structure 1MA3

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                      
1J8F_C      44 RRVICLVGAGIST--SAGIPDFRSPstGLYDNLEKYHLpyPEAIFEISYFkkhPEPFFALAKELyp-gQFKPTICHYFMR 120  human
EAK86837    49 RNVIVLAGAGISTsaSPPIPDFRSPgtGLYANLAAYNLpyAEAIFDIGYFqrhPQPFFTLAKHLyp-gNFKPALAHYFLT 127  Ustilago maydis 521
EAA40294    22 ESIVILAGAGISV--AAGIPDFRSKgtGLYSQLERYNLptPTSMFDLSYYclrPRPFSSLSVSIfpsyKYKPTMAHHFFK 99   Giardia lamblia ...
1Q14_A      29 AKVIFMVGAGIST--SCGIPDFRSPgtGLYHNLARLKLpyPEAVFDVDFFqsdPLPFYTLAKELyp-gNFRPSKFHYLLK 105  baker's yeast
Q7ZVK3      75 KNIICMVGAGIST--SAGIPDFRSPgtGLYANLQKYNLpyPEAIFQIDYFkkhPEPFFALARELyp-gQFKPTVYHYFIK 151  zebrafish
NP_650880   48 RKIVTMVGAGIST--SAGIPDFRSPgsGLYSNLKKYELphPTAIFDLDYFeknPAPFFALAKELyp-gSFIPTPAHYFIR 124  fruit fly
EAA34489   878 RKVVVLTGAGIST--AAGIPDFRSPetGLYANLAALELeePEDVFSLPFFkenPKPFYVLAKDLyp-gKFHPTISHVFIS 954  Neurospora crassa
EAA62041    36 RRVVVMVGAGIST--AAGIPDFRSPdtGIYANLVHLDLpdPEAVFDISFFrqnPKPFYALARELap-gQYRPTLAHSFVK 112  Aspergillus nidu...
Q9NTG7     138 QRVVVMVGAGIST--PSGIPDFRSPgsGLYSNLQQYDLpyPEAIFELPFFfhnPKPFFTLAKELyp-gNYKPNVTHYFLR 214  human
EAA67072  1763 TRIVALVGAGLST--SSGLADFRTPdtGLYAKLEPLQLpyPEALFHISYFkhtPEPFYAIARGRhp-wNTKPGVGHAFLA 1839 Aspergillus nidu...
Feature 1                     #                 #                                              
1J8F_C     121 LLKDKGLLLRCYTQNIDTLERIAGLeqedLVEAHGTFYT-SHCVSa---sCRHEYpl-swMKEKIFSEV---TPKC--ED 190  human
EAK86837   128 LLQRKQKLKRVFTQNVDTLERIAGVeadkVVEAHGSFAT-STCIV-----CKHSVdd-dwIRNKVESGQ---VARCprPK 197  Ustilago maydis 521
EAA40294   100 ILEDRGLVRFIYTQNIDELEIFAGVsprrILQCHGSYCKgLYCLGnvsgvCTYQVedqnvFRAAAMDQS---VSHC--PR 174  Giardia lamblia ...
1Q14_A     106 LFQDKDVLKRVYTQNIDTLERQAGVkddlIIEAHGSFAH-CHCIG-----CGKVYpp-qvFKSKLAEHPikdFVKC--DV 176  baker's yeast
Q7ZVK3     152 MLKDKGLLRRCYSQNIDTLERVAGLegedLIEAHGTFHT-SHCVSf---lCRKEYsm-dwMKNQIFSEE---IPKC--DS 221  zebrafish
NP_650880  125 LLNDKGLLQRHYTQNIDTLDRLTGLpedkIIEAHGSFHT-NHCIK-----CRKEYdm-dwMKAEIFADR---LPKC--QK 192  fruit fly
EAA34489   955 LLATKGLLYQLFTQNIDCLERAAGVpadlIVEAHGSFAS-QRCID-----CKTPYpd-dkMREHVSRAE---VPHC--EK 1022 Neurospora crassa
EAA62041   113 LLYDKGKLLKHFTQNIDCLERLAGVpgdmIIEAHGSFAT-QRCIE-----CKTAYpd-dlMKEAIAKGE---VPNC--AE 180  Aspergillus nidu...
Q9NTG7     215 LLHDKGLLLRLYTQNIDGLERVSGIpaskLVEAHGTFAS-ATCTV-----CQRPFpg-edIRADVMADR---VPRC--PV 282  human
EAA67072  1840 LLEKKGVLGFVFTQNIDGLELDAGVsrerVMNLHGDWSD-QHCIK-----CRSSYpa-drMRKAILTGE---VPFCvqAN 1909 Aspergillus nidu...
Feature 1                           # #####                                      ###           
1J8F_C     191 Cq------------SLVKPDIVFFGESLParFFSCMQSDFlk-------------vDLLLVMGTSLQVQPFASLISkapl 245  human
EAK86837   198 CpgrktgskgeqrgGLVKPDIVFFGESLPprFFRCIPDLKt--------------aDLLIVMGTSLQVQPFASLIDavpa 263  Ustilago maydis 521
EAA40294   175 Cg------------RVLKPRIVFFGEQLPseFQLAPEIIGdae-----------ktSMLLILGTSLTVAPFNFLAEmvpn 231  Giardia lamblia ...
1Q14_A     177 Cg------------ELVKPAIVFFGEDLPdsFSETWLNDSewlrekittsgkhpqqPLVIVVGTSLAVYPFASLPEeipr 244  baker's yeast
Q7ZVK3     222 Cg------------SLVKPDIVFFGESLPsrFFTSMKADFpq-------------cDLLIIMGTSLQVQPFASLVSrvsn 276  zebrafish
NP_650880  193 Cq------------GVVKPDIVFFGENLPkrFYSSPEEDFqd-------------cDLLIIMGTSLEVQPFASLVWrpgp 247  fruit fly
EAA34489  1023 Cn------------GLVKPDIVFFHENLPs-LFFDRRHMAee-------------aDLILVLGTSLTVHPFAGLPDlapf 1076 Neurospora crassa
EAA62041   181 Cq------------GLVKPDIVFFGEALPs-AFFDNRTLPet-------------aDLCIVMGTSLSVQPFASLPSfvad 234  Aspergillus nidu...
Q9NTG7     283 Ct------------GVVKPDIVFFGEPLPqrFLLHVVDFPm--------------aDLLLILGTSLEVEPFASLTEavrs 336  human
EAA67072  1910 Ce------------GIVKPAIVMFGESLPegFDSREEEMLst-------------aDLLLVIGTSLKVAPCSEIPRrlps 1964 Aspergillus nidu...
Feature 1                                                                          
1J8F_C     246 sTPRLLINKEKAgqsdpflgmimgl---------------gggmdfdskkayrDVAWLGECDQGCLAL 298  human
EAK86837   264 tCPRLLINLERVgelassngylgggmgagmy---nesgfdfdglthggkhktrDVFYEGKADDGVAEL 328  Ustilago maydis 521
EAA40294   232 eALRVLINRDPAgyvnqalrfyanahpektaadvfaneqlmqealdlvgrdgmDMFLPGDIETTISSL 299  Giardia lamblia ATCC 50803
1Q14_A     245 kVKRVLCNLETVgdfka-------------------------------nkrptDLIVHQYSDEFAEQL 281  baker's yeast
Q7ZVK3     277 rCPRLLINMEKTgqsefgmglfsfg----------------ggmdfdsdkayrDVAHLSTCDDGCMTL 328  zebrafish
NP_650880  248 rCIRLLINRDAVgqascvlfmdpnt----------------rsllfdkpnntrDVAFLGDCDAGVMAL 299  fruit fly
EAA34489  1077 eVPRVLFNMERVgslg---------------------------------sqpdDVLVLGDCDTGVRQL 1111 Neurospora crassa
EAA62041   235 gVPRVLINRERVgglg---------------------------------srpdDVLILDDCDNGVRKL 269  Aspergillus nidulans FGSC A4
Q9NTG7     337 sVPRLLINRDLVgplaw-------------------------------hprsrDVAQLGDVVHGVESL 373  human
EAA67072  1965 hVPRVLVNRELVgnig---------------------------------tresDVCLLGDCDAWLREV 1999 Aspergillus nidulans FGSC A4

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