Conserved Protein Domain Family
VWA_integrin_invertebrates

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cd01476: VWA_integrin_invertebrates 
VWA_integrin (invertebrates): Integrins are a family of cell surface receptors that have diverse functions in cell-cell and cell-extracellular matrix interactions. Because of their involvement in many biologically important adhesion processes, integrins are conserved across a wide range of multicellular animals. Integrins from invertebrates have been identified from six phyla. There are no data to date to suggest any immunological functions for the invertebrate integrins. The members of this sub-group have the conserved MIDAS motif that is charateristic of this domain suggesting the involvement of the integrins in the recognition and binding of multi-ligands.
Statistics
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PSSM-Id: 238753
Aligned: 7 rows
Threshold Bit Score: 199.548
Created: 10-Jan-2006
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
metal
Feature 1:metal ion-dependent adhesion site (MIDAS)
Evidence:
  • Comment:the MIDAS motif in integrins is involved in collagen binding
  • Comment:divalent cations are bound by the MIDAS motif

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1            # # #                                                                    
NP_499959 238 LDLVLVLDFSTTTDPVYNSYKDLSKRLVSQLkig-phyTQVAAVTFATv--gRTRVRFNLKKYQTQe--eVLRGIDNLKS 312 Caenorhabditis ele...
NP_509176 160 SDIIFVIDATSSVRGIFEQYITYIEKVVEGLdvq-ptvDHVGAIVYSSe--kKQRTKIKLGEHKDRg--sLVKAVDELPF 234 Caenorhabditis ele...
NP_498247 249 LDLALVVDASESLDHLFSDQKKFLVERVLGNinihpeaVRVALITYSG----QAFVHFKFNSFLYGnntsVQGFVKNIRS 324 Caenorhabditis ele...
NP_498247  53 LDLVFILDSSGSLRDKFQDEIDIIRRILKHVtig-ktaTRVMLIQFSG----TQHLEFNFEKFTDRe--eLLAALDVLRH 125 Caenorhabditis ele...
NP_505768 463 ADVFFLVDVSQGTGDKSQQYLDIAASAISSLpis-qdtVRVGLISYSGp--gRTHVRVFLDKHNEKe--kLIEEMFLMER 537 Caenorhabditis ele...
NP_499959  34 LNVLIVLDRSDSVKGGFNKSRKFVTDVSEELqig-pekHRVALIVYSGlsyrREVMPWNFAKSNEE----FVRKVNALRA 108 Caenorhabditis ele...
NP_510558 296 KDILFLLDSSGNVVQQYEKQKKYIEEIVRKLeh----pRRMALITFAGr--tRQKIVIPLPEEPNGk--kFIEKLRKARF 367 Caenorhabditis ele...
Feature 1         #                                   #                                       
NP_499959 313 RGGtTAIGAGIEKALTQld---esEGARPGIatKVMVVFTDGwsnkgpdpekrARDAVssgFEMYTVAYTAHtpgavtln 389 Caenorhabditis ele...
NP_509176 235 FSGiTATGQALKFAANHt------EGRRENFt-LNYVILTDGysydl--iesgARVLRe-vPNSAIYAVSIGei----fl 300 Caenorhabditis ele...
NP_498247 325 IKGtTATNVALMDAFDLltskdpsIGVREGVp-KMALVLTDGhshks--pkdiSEKMRa--AGIIMIAVSVTprp--lvd 397 Caenorhabditis ele...
NP_498247 126 VSGiTRIGGAFEFALQQlkt--pgSGLRDGTvpKIVYLLSDGrthdfpkdwqmADILRreiPNIDIWAYGTGdy----va 199 Caenorhabditis ele...
NP_505768 538 HGGtTRTADAIRYATKIfeg--kaHPARKNVk-KVLVVFTDGysqdn--pkeaSRMARa--KGIQLIAVAVKdrla-ppd 609 Caenorhabditis ele...
NP_499959 109 IGGtTNTKKALEVGLELm------AQRNVSIp-TLVMVVTDGrsadd--pkgpGQILQa-qPNTWVFAAATGdpe--kvd 176 Caenorhabditis ele...
NP_510558 368 LRGvTAAGAAISVTTQY-------VLQKSRH--VQVVVVTDGfsfdd--vekqSEALRa-vVGMETFVTGRYfp----vv 431 Caenorhabditis ele...
Feature 1                      
NP_499959 390 NETLSAISGDVHHTFTD 406 Caenorhabditis elegans
NP_509176 301 RKELEMITGNPDNVLTG 317 Caenorhabditis elegans
NP_498247 398 EAELRLIAGSEKRAFTP 414 Caenorhabditis elegans
NP_498247 200 MAALANYTQSEQKIVTN 216 Caenorhabditis elegans
NP_505768 610 TEQLTEIGGNGRSIFIS 626 Caenorhabditis elegans
NP_499959 177 TRELMDITGNINHIVMH 193 Caenorhabditis elegans
NP_510558 432 KNVLHSIGGADDHVFFD 448 Caenorhabditis elegans

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