Conserved Protein Domain Family
TM4SF12_like_LEL

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cd03157: TM4SF12_like_LEL 
Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF12_like family. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This sub-family contains proteins similar to human transmembrane 4 superfamily member 12 (TM4SF12).
Statistics
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PSSM-Id: 239410
Aligned: 5 rows
Threshold Bit Score: 186.285
Created: 9-Nov-2005
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
dimer interface
Feature 1:dimer interface [polypeptide binding site]
Evidence:
  • Comment:dimeric assembly observed in the CD81 crystal is predicted to resemble quaternary structure of intact CD81 at the cell surface

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1      #    #   # ##  #                #  ##  ##                                      
NP_036470 116 EQELMVPVQWSDMVTLKARMTNYGLPRYrWLTHAWNFFQREFKCCGVVYFTDWlemtemdWPPDSCCVRefpgcskqahq 195 human
CAI21068  113 WTYDEPMVQRSDMISLKSRMPHFGLQRYqWLTHAWNALQTELKCCGVIYFTDWlemtemeWPPDSCCSNqypgcarqahy 192 zebrafish
CAG32488  116 EQEITVPVQWSDMITLKARMTNYGLPRYqWLTHAWNFFQREFKCCGVVYFTDWlemtemdWPPDSCCVRefpgcskqahh 195 chicken
XP_698010  65 WTYDEVREAMYKQECLLSSLSLTLNKMAaGMRIRFLSSLLTLKCCGVIYFTDWlemtemeWPPDSCCSNqypgcarqahy 144 zebrafish
CAF95121   91 LLLCWVTVLRSDMISLKSRMSNFGLQHYqWLTHTWNSFQTQFKCCGVIYFTDWlemtemeWPPDSCCSNpypacahvafe 170 Tetraodon nigrovir...
Feature 1                            
NP_036470 196 edlsdlyqeGCGKKMYSFLRGTK 218 human
CAI21068  193 ndlsdlyqeGCGPKIYSFIRGTK 215 zebrafish
CAG32488  196 edlsdlyqeGCGKKMYTFLRGTK 218 chicken
XP_698010 145 ndlsdlyqeGCGPKIYSFIRGTK 167 zebrafish
CAF95121  171 hdlsdlhqeGCGPKIYTFIRGTT 193 Tetraodon nigroviridis

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